BAC Information

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BAC

Clone NameB6Ng01-238O13
Chromosome3 (Build37)
Map Location 110,524,713 - 110,525,800
singlet/doubletsinglet
Overlap genenone
Upstream geneNtng1, LOC100043181, LOC100043183, Prmt6
Downstream geneLOC100043190, LOC668712
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-238O13.bB6Ng01-238O13.g
ACCGA049479GA049480
length1,1911,083
definitionB6Ng01-238O13.b B6Ng01-238O13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatttgaatttttggtagaatctgtagattgctttcagcagaatg
tccatatttactatattaatcctgttgatcgatgagcatgggagatcatt
ccatcttcagagatttgaagttcttcccatacagatcttttacttgcttg
gttgagtcacactatggcatgtaatattatttgtgactgttgtgaagggc
gttgttttcgtaatttcattctcagccatttaaactttgagtagatgaag
gctactgatctgtttgagttcattttacatccagccattttgctgaagtt
gtttatcagttttagaagttctctaatggaatttttgtggtcacttaagt
atatgatcatattatctgcaaatagtaatatttttgacttcttcatttcc
aatttttatgcctttaacctccttttgttgtctaactactctagctagac
cttccagtactatattgaatagataggaagagaatgggcagccttgtcta
gtccctgattagttggattgctacaagtttctctccaattagtttgatgt
tggctactggtttgctatatattgcttttactctgtttagctatgggctt
tgaattcgtgatttttccaagacttttaacatgaagggttgctggatttt
ctcaaatgtttttcagcatctaatgaaatgatcttgtgtttcccccaccc
cctttgggtttgtttatttagtggtttacattgatggattcccatgtatt
aaaccatccctgtattcctaggatgaagcctacttgatcctggtgaatga
taattttgatgtgttcatggattcaattggcaagaaccttattgaatatt
tttgcgtcaatgttcataatggagattggtcggtctgtagttctctttct
ttgtcgggtcttggtgtggtttagttatagcttcatggaacgattgggta
tttttttctcttttctatctgtggacagtttggatattgggtattagatt
cttctttaaggtctgatagaattctcactaaacccatctggactggagcc
atttcttttttctgctggtggaagaatttatgaccgcctctattcttcat
ggtattggccgttcagtacattactggacccgtttactgcactgtatggt
cgatgtccattcacgaagttcaattgacgagcgtaacactg

gaattctctcccctcccccaacattccactggtttgtgaattttaaaaga
atagtgattattctttatttcctgtttctttttttttaactccaccagaa
gataatctgatactgagcatgtgaattaaaagagttatgacaaagtcaag
ttgttagcaattatttttcttccttagtgtttttaagagaatgtcaacac
cttgagttagaaatgaagcttacctgcaaatttgggtatggttttctgaa
ttatagagcatcacaaacttatacttatctgtatactaagtatgatcaga
tagagtttaaaacatcttttcttagaaaacatacaaggtgcttgactcaa
gtactacctagttaagcattgatttctttgaagttctatacttatgtata
aaatccatgtaaaagtttgcacaaatgtatttactctattataatatcct
attagaaattatttattaaataaacacatacacggagcactatatatgca
tacatagatacatagatagatagacataaagaaatagatgatagctggat
agattttatatatacacactatctatctatctatctatctatctatctat
ctatctatctatctatcatctgtctactatctatcatctgtctatctgtc
tgtctatctatctatctgtctgtctatctgtctatctgtctgtctgtctg
tctgtctgtctgtctatctagctgtctatctatctatctatctatctatc
tatctatctatctatctatctatctatctatctaccactatgaatgacag
agagatcaactgacaggtggacagtagatggatatgtggatatcagtaag
acagacagaaaatatagcaaagttactaaatctcagagtactattctacc
agggcttcccgttttataagaagaacctttcccagttataaatttcacaa
tcagattgtttatatatgtaaaaatgaaaacattgctgcatcaccctgat
cctctcttttattgtgatataattgggtgatgtactttacactgtggcag
tattcactttattagtgagaacacaaagttaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_110524713_110525800
seq2: B6Ng01-238O13.g_70_1152

seq1  GAATTCTCTCCCCTCCCCCAACATTCCACTGGTTTGTGAATTTTAAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCCCCTCCCCCAACATTCCACTGGTTTGTGAATTTTAAAAGA  50

seq1  ATAGTGATTATTCTTTATTTCCTGTTTCTTTTTTTTTAACTCCACCAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGATTATTCTTTATTTCCTGTTTCTTTTTTTTTAACTCCACCAGAA  100

seq1  GATAATCTGATACTGAGCATGTGAATTAAAAGAGTTATGACAAAGTCAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATCTGATACTGAGCATGTGAATTAAAAGAGTTATGACAAAGTCAAG  150

seq1  TTGTTAGCAATTATTTTTCTTCCTTAGTGTTTTTAAGAGAATGTCAACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAGCAATTATTTTTCTTCCTTAGTGTTTTTAAGAGAATGTCAACAC  200

seq1  CTTGAGTTAGAAATGAAGCTTACCTGCAAATTTGGGTATGGTTTTCTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGTTAGAAATGAAGCTTACCTGCAAATTTGGGTATGGTTTTCTGAA  250

seq1  TTATAGAGCATCACAAACTTATACTTATCTGTATACTAAGTATGATCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGAGCATCACAAACTTATACTTATCTGTATACTAAGTATGATCAGA  300

seq1  TAGAGTTTAAAACATCTTTTCTTAGAAAACATACAAGGTGCTTGACTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTTTAAAACATCTTTTCTTAGAAAACATACAAGGTGCTTGACTCAA  350

seq1  GTACTACCTAGTTAAGCATTGATTTCTTTGAAGTTCTATACTTATGTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTACCTAGTTAAGCATTGATTTCTTTGAAGTTCTATACTTATGTATA  400

seq1  AAATCCATGTAAAAGTTTGCACAAATGTATTTACTCTATTATAATATCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCATGTAAAAGTTTGCACAAATGTATTTACTCTATTATAATATCCT  450

seq1  ATTAGAAATTATTTATTAAATAAACACATACACGGAGCACTATATATGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAAATTATTTATTAAATAAACACATACACGGAGCACTATATATGCA  500

seq1  TACATAGATACATAGATAGATAGACATAAAGAAATAGATGATAGCTGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAGATACATAGATAGATAGACATAAAGAAATAGATGATAGCTGGAT  550

seq1  AGATTTTATATATACACACTATCTATCTATCTATCTATCTATCTATCTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTATATATACACACTATCTATCTATCTATCTATCTATCTATCTAT  600

seq1  CTATCTATCTATCTATCATCTGTCTACTATCTATCATCTGTCTATCTGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTATCTATCTATCATCTGTCTACTATCTATCATCTGTCTATCTGTC  650

seq1  TGTCTATCTATCTATCTGTCTGTCTATCTGTCTATCTGTCTGTCTGTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTATCTATCTATCTGTCTGTCTATCTGTCTATCTGTCTGTCTGTCTG  700

seq1  TCTGTCTGTCTGTCTATCTAGCTGTCTATCTATCTATCTATCTATCTATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTGTCTGTCTATCTAGCTGTCTATCTATCTATCTATCTATCTATC  750

seq1  TATCTATCTATCTATCTATCTATCTATCTATCTACCACTATGAATGACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTATCTATCTATCTATCTATCTATCTATCTACCACTATGAATGACAG  800

seq1  AGAGATCAACTGACAGGTGGACAGTAGATGGATATGTGGATATCAGTAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATCAACTGACAGGTGGACAGTAGATGGATATGTGGATATCAGTAAG  850

seq1  ACAGACAGAAAATATAGCAAAGTTACTAAATCTCAGAGTACTA-TCTACC  899
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ACAGACAGAAAATATAGCAAAGTTACTAAATCTCAGAGTACTATTCTACC  900

seq1  AGGGCTTCCCGTTTTATAAG-AGAACCTTCCCAAGTTATAAA-TTCACAA  947
      |||||||||||||||||||| |||||||| || ||||||||| |||||||
seq2  AGGGCTTCCCGTTTTATAAGAAGAACCTTTCCCAGTTATAAATTTCACAA  950

seq1  TCAGATTGTTTATAATATGTAAAAATGAAAACATTTGCTGCATCACCCTG  997
      ||||||||||||| ||||||||||||||||||| ||||||||||||||||
seq2  TCAGATTGTTTAT-ATATGTAAAAATGAAAACA-TTGCTGCATCACCCTG  998

seq1  ATCCTCTCTTTTAATGGTGGATATAATTGGGTGATGTAACTTTACACTGT  1047
      ||||||||||||| ||   |||||||||||||||||| ||||||||||||
seq2  ATCCTCTCTTTTATTG--TGATATAATTGGGTGATGT-ACTTTACACTGT  1045

seq1  GGGAAGTATCAACTTTTATTAGTGAGAACACAAAAGTTAGA  1088
       || |||||  || ||||||||||||||||| |||||||||
seq2  -GGCAGTATTCAC-TTTATTAGTGAGAACAC-AAAGTTAGA  1083


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