BAC Information

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BAC

Clone NameB6Ng01-238P10
Chromosome3 (Build37)
Map Location 46,935,251 - 46,936,271
singlet/doubletsinglet
Overlap genenone
Upstream geneEG241989, LOC545517, LOC383849
Downstream geneLOC383850, LOC100039426, LOC666202
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-238P10.bB6Ng01-238P10.g
ACCGA049518GA049519
length1,024961
definitionB6Ng01-238P10.b B6Ng01-238P10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattacaactgctatgaaatcaatgtggaaattaaagagcatcca
aattcaaagaaacaaaataggacctcacaagctaaaggtttaaatacaat
tgcagtaaaaggatgcttatgggtaccagagcttagctctctacaaatga
attttcaaaaattattggcagtgcactggggttcacatgtacaatagcac
accttgtccacatacacagatgaactcatgatctcaccaacacacacagt
tttaactacattatttcaagaaagacaacacaacaacaaatagagatatt
tgcttgataaaaatttcatggatactgaagtgacaaaaagtaaacatata
tactacaatggagagacaaggaaatataaacatgaaagttctatgaagct
cataatgaatttccttaaaatatctggaacttagatattgtatttacaaa
tataatatatactagcatgtgagaaattattgctgggattttgtttgttt
gtttgttgttttatttggttttggtttttttgagcatctacagtattcct
gtcactgtagacatttgaactagtcaacaagagacagattgctttctttg
tggaccttttaatctagagtgacactcagataatgaaacaacaaacacat
ctctcagatgatgacgggtgataggagagtggtagcagctacagggaata
gagtgacatgggaacacatcaatcaagtgcttaataccatgccagcacaa
catacagctagaaactgctggggagcactcacggtttacttactttcact
tgaactggctcacttatttaactgaatggtttgagctgtgacacttaggt
ttcatcaagggagcacacaaggaagagtacagtatgctggctccactgca
actgaggaagcaaattcagtatcactgaacttattacacaaggaatcttg
tccccatgcccccaatggtctttgtacttttataaatatttataatggtt
taggatttttaaagtaactaatgg

gaattctctgtttagctctgtaccccatttttaattgggttgcttggtct
gttggtatctaacttctgtttgtttatttgtttgtttgtttttcaagacc
aggaattttctgtgtagccctggttgtcctggaactcactctgtagacca
ggctggcctcgaactcagagatctgcctgcctcttcctcccaagtgctgg
ggttaaaggcatacactaccactgactggtggtgtctaactttttgagtt
ctttatacattttggatattaggcatcaatcaaacaaagaattggtgaag
atcttttcccaatgtgtaggctgtccttttgtcatattgatggtgtcctt
tgccttaaagaagcttttggtttcatgaggtcccatttctttattgttga
ccatggggcctgagacactggtattctgttgtctcctgtaccagtgagct
caaaaccttgttctactttctattctatttgccttagtgtatctggcttt
actctaaggtctttgatccatttggacttaagttttgggcagagagataa
atatggatttatttacactcttctacattgagatatccagttagacccgc
accatttgttgaagatactctccctattccagaacaaatagtttcttttg
tcaaacattaagtggctttaggtgtgtgggcttatgtctgggtctgtgat
tcacttacattgattcatatgtctgtttctctactgacaccatgatgttt
ttattatttggacattcttgtcatataagtctttcacttgcttggtttag
agttacaccaaaatatttaatattgtattgatattcgtgaagggcattgt
tgtttctaaactttctttttttcaactccttcgtagccctgtataaaggg
aaaggatactgattttcttttaaggtttaatttagttatccagcccgttg
ttgattgtgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_46935251_46936271
seq2: B6Ng01-238P10.b_49_1072 (reverse)

seq1  CCATTAGTTACTTT-AAAATTCTTAACCATTATAAATA-TTATAAAAGTT  48
      |||||||||||||| ||||| || |||||||||||||| ||||||||| |
seq2  CCATTAGTTACTTTAAAAATCCTAAACCATTATAAATATTTATAAAAG-T  49

seq1  ACAAAGACCATTGGGGGCATGGGGACAAGATTCCTTGCTGTAATAAGTTC  98
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ACAAAGACCATTGGGGGCATGGGGACAAGATTCCTTG-TGTAATAAGTTC  98

seq1  AGTGATACCTGAATTTTGCTTCCTCAGTTGCAGT-GAGCCAGCTTCCTGT  147
      ||||||| ||||| |||||||||||||||||||| |||||||| | ||||
seq2  AGTGATA-CTGAA-TTTGCTTCCTCAGTTGCAGTGGAGCCAGCATACTGT  146

seq1  ACTCTTCCTTGTGTGCTCCCTTGATG-AACCTAAGTGTCACAGCTC-AAC  195
      |||||||||||||||||||||||||| ||||||||||||||||||| |||
seq2  ACTCTTCCTTGTGTGCTCCCTTGATGAAACCTAAGTGTCACAGCTCAAAC  196

seq1  CATTCAGTTAATAAGGTGAGCCAGTTC-AGTTGAAGTAAGTAAACCGTGA  244
      |||||||||||  | |||||||||||| |||  |||||||||||||||||
seq2  CATTCAGTTAAATAAGTGAGCCAGTTCAAGTGAAAGTAAGTAAACCGTGA  246

seq1  GTGCT-CCCAGCAGTTTCTAGCTGTATGTTGTGCTGGCATGGTATTAAGC  293
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCCCCAGCAGTTTCTAGCTGTATGTTGTGCTGGCATGGTATTAAGC  296

seq1  ACTTGATTGATGTGTTCCCATGTCACTCTATTCCCTGTAGCTGCTACCAC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGATTGATGTGTTCCCATGTCACTCTATTCCCTGTAGCTGCTACCAC  346

seq1  TCTCCTATCACCCGTCATCATCTGAGAGATGTGTTTGTTGTTTCATTATC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTATCACCCGTCATCATCTGAGAGATGTGTTTGTTGTTTCATTATC  396

seq1  TGAGTGTCACTCTAGATTAAAAGGTCCACAAAGAAAGCAATCTGTCTCTT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGTCACTCTAGATTAAAAGGTCCACAAAGAAAGCAATCTGTCTCTT  446

seq1  GTTGACTAGTTCAAATGTCTACAGTGACAGGAATACTGTAGATGCTCAAA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACTAGTTCAAATGTCTACAGTGACAGGAATACTGTAGATGCTCAAA  496

seq1  AAAACCAAAACCAAATAAAACAACAAACAAACAAACAAAATCCCAGCAAT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCAAAACCAAATAAAACAACAAACAAACAAACAAAATCCCAGCAAT  546

seq1  AATTTCTCACATGCTAGTATATATTATATTTGTAAATACAATATCTAAGT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTCACATGCTAGTATATATTATATTTGTAAATACAATATCTAAGT  596

seq1  TCCAGATATTTTAAGGAAATTCATTATGAGCTTCATAGAACTTTCATGTT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGATATTTTAAGGAAATTCATTATGAGCTTCATAGAACTTTCATGTT  646

seq1  TATATTTCCTTGTCTCTCCATTGTAGTATATATGTTTACTTTTTGTCACT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTCCTTGTCTCTCCATTGTAGTATATATGTTTACTTTTTGTCACT  696

seq1  TCAGTATCCATGAAATTTTTATCAAGCAAATATCTCTATTTGTTGTTGTG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTATCCATGAAATTTTTATCAAGCAAATATCTCTATTTGTTGTTGTG  746

seq1  TTGTCTTTCTTGAAATAATGTAGTTAAAACTGTGTGTGTTGGTGAGATCA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTTCTTGAAATAATGTAGTTAAAACTGTGTGTGTTGGTGAGATCA  796

seq1  TGAGTTCATCTGTGTATGTGGACAAGGTGTGCTATTGTACATGTGAACCC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTCATCTGTGTATGTGGACAAGGTGTGCTATTGTACATGTGAACCC  846

seq1  CAGTGCACTGCCAATAATTTTTGAAAATTCATTTGTAGAGAGCTAAGCTC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCACTGCCAATAATTTTTGAAAATTCATTTGTAGAGAGCTAAGCTC  896

seq1  TGGTACCCATAAGCATCCTTTTACTGCAATTGTATTTAAACCTTTAGCTT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTACCCATAAGCATCCTTTTACTGCAATTGTATTTAAACCTTTAGCTT  946

seq1  GTGAGGTCCTATTTTGTTTCTTTGAATTTGGATGCTCTTTAATTTCCACA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGTCCTATTTTGTTTCTTTGAATTTGGATGCTCTTTAATTTCCACA  996

seq1  TTGATTTCATAGCAGTTGTAATGAATTC  1021
      ||||||||||||||||||||||||||||
seq2  TTGATTTCATAGCAGTTGTAATGAATTC  1024


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