BAC Information

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BAC

Clone NameB6Ng01-240I08
Chromosome3 (Build37)
Map Location 118,027,290 - 118,028,384
singlet/doubletsinglet
Overlap genenone
Upstream geneD3Bwg0562e, 4833424O15Rik, EG668759, Snx7, LOC100043260
Downstream geneDpyd
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-240I08.bB6Ng01-240I08.g
ACCGA050669GA050670
length1,0901,086
definitionB6Ng01-240I08.b B6Ng01-240I08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgcactaaacccgtctggtcctgggctttttttggttgggagac
tattaataactgcttctatttctttaggtgatatgggactgtttagatgg
tcaacttgatcctgattcaactttggtacctggtatctgtccagaaattt
gtccatttcgtccaggttttccagttttgttgagtatagccttttgtaga
aggatctgatggtgttttggatttcttcaggatctgttgttatgtctccc
ttttcatttctgattttgttaattaggattttgtccctgtgccctttagt
gagtctagctaagggtttatctatcttgttgattttctcaaagaaccaac
tcctcgtttggttaattctttgaatagttcttcttgtttccacttggttg
atttcacccctgagtttgattatttcctgccgtctactcctcttgggtga
atttgcttcctttttttctagagcttttagatgtgttgtcaagctgctag
tatgtgctctctcctgtttcttcttggaggcactcagagctatgagtttc
cctcttagaaatgctttcattgtgtcccataggtttgggtacgttgtggc
ttcattttcattaaactctaaaaagtctttaatttctttctttattcctt
ccttgaccaaggtatcattgagaagagtattattcagcttccacgtgaat
gttgtctttccattatttatgttgttattgaagatcagtcttaggccatg
gtggtctgataggatacatgggacaatttcaatatttttgtatctattga
ggcctgttttgtgaccaattatatggtcaattttggagaaggtcccgtga
ggtgctgagaagaaggtatatccttttgttttaggataaaatgttctgta
gatatctgtcaagtccatttgtttcataacttctgttagtttcactgtgt
cctgtttagtttctgtttccacgatctgtcctttgaagaaagtgtgtgtt
gaagtctcccactattatgtgtgaggtgcaatgtatgctttggagcttaa
ctaaaggtgtctctaatgaaagttggcttgcccctgcaat
gaattctcctttaaataaaaacgaagtcagattttagaatgaaattctct
agtgctgtcaaactgtttgaaactggatttggcagttgtcctttcaaact
gttatttcagagcacgtgtcccagaagggacagctaagaatgcttgtcat
atttgaactctttccagaaccattcagcaggatactggcagtccacttgt
tcgtgttaattatttctgccctgattgcctggcaacacataacatgggaa
gtattatattttgctatttgagaatgcttccagcagaatgcagggagaaa
atggaatacaaagtcggctggaaatgtaacttaataagttaggtgtgtat
tttgattgaaaatttgttacagatgaagtggtttgtaatcccatgattgt
gttaaccacagtttcagagagcttgagggtgtctcagtggatattggtag
aatgaaactaatgatagatcttaatggccagcacaccacaatcgatgaac
atgaatggtctcccttgtaggcagaatggatgcatatgtgtgtgtgacca
tgtgttacacataggtatgatgggcagctgctcatgcaatgggatttgtt
tacctgtgcctctctggtggggttgggaagaagagagctttgaatgacag
actttatagcactctataatggtttttttgtgtgtgtgtgtgtgtgataa
tgttttattaccttgaagtcacataggcaccaccagtcccaacaacctcc
ttatttgcattctgcaaagtgatggggcaaataggaatacatatgactca
cacaagcatatgaactcaagcccagatcttttaatgtggcccctaaggac
taagtccctcatgcttactcaacaagtgctggttccccaaagggccatct
tcttagcctataaaggcaccattatttcatctggtggtaatttctccttc
ctctcttccgctcctcttcttcaatcttcttggctgctgctccctcttac
gcctggcgtttcttctttaagtattgttgaaggctggacctgaaggtccg
tcagggaagccaattaaatggtgatgccaagagctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_118027290_118028384
seq2: B6Ng01-240I08.g_64_1149 (reverse)

seq1  AAGCTCTGGGCATCA-CATTTAATTTGGGCGTTCCCCTGACGGAACTTCA  49
      ||||||| ||||||| |||||||||  |||  | |||||||||| |||||
seq2  AAGCTCTTGGCATCACCATTTAATT--GGC--TTCCCTGACGGACCTTCA  46

seq1  GCTTCAGGACTTCAACAATACTAAAAGAAGAAAACGCAGGCGAAAGAAGG  99
      | | || | ||||||||||||| ||||||||||   |||||| ||| |||
seq2  GGTCCA-GCCTTCAACAATACTTAAAGAAGAAACGCCAGGCGTAAG-AGG  94

seq1  GAGCAAGCAAGCAAAGGAAAGGATGGAAAGAAAGAGGAGCGGAAGAGAGG  149
      |||| ||| ||| |||   | ||| |||   |||||||||||||||||||
seq2  GAGC-AGC-AGCCAAG---AAGATTGAA--GAAGAGGAGCGGAAGAGAGG  137

seq1  AAGGAGAAATTACCACAGGATGAAATAAT-GTGGCTTTATAGGCTAAGAA  198
      ||||||||||||||||  ||||||||||| ||| ||||||||||||||||
seq2  AAGGAGAAATTACCACCAGATGAAATAATGGTGCCTTTATAGGCTAAGAA  187

seq1  GATGGCCCTTTGGGGAA-CAGCACTTGTTGAGTAAGCATGAGGGACTTAG  247
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GATGGCCCTTTGGGGAACCAGCACTTGTTGAGTAAGCATGAGGGACTTAG  237

seq1  TCCTTAGGGGCCACATTAAAAGATCTGGGCTTGAGTTCATATGCTTGTGT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAGGGGCCACATTAAAAGATCTGGGCTTGAGTTCATATGCTTGTGT  287

seq1  GAGTCATATGTATTCCTATTTG-CCCATCACTTTGCAGAATGCAAATAAG  346
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GAGTCATATGTATTCCTATTTGCCCCATCACTTTGCAGAATGCAAATAAG  337

seq1  GAGGTTGTTGGGACTGGTGGTGCCTATGTGACTTCAAGGTAATAAAACAT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTGTTGGGACTGGTGGTGCCTATGTGACTTCAAGGTAATAAAACAT  387

seq1  TATCACACACACACACACACAAAAAAACCATTATAGAGTGCTATAAAGTC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACACACACACACACACAAAAAAACCATTATAGAGTGCTATAAAGTC  437

seq1  TGTCATTCAAAGCTCTCTTCTTCCCAACCCCACCAGAGAGGCACAGGTAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTCAAAGCTCTCTTCTTCCCAACCCCACCAGAGAGGCACAGGTAA  487

seq1  ACAAATCCCATTGCATGAGCAGCTGCCCATCATACCTATGTGTAACACAT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATCCCATTGCATGAGCAGCTGCCCATCATACCTATGTGTAACACAT  537

seq1  GGTCACACACACATATGCATCCATTCTGCCTACAAGGGAGACCATTCATG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACACACACATATGCATCCATTCTGCCTACAAGGGAGACCATTCATG  587

seq1  TTCATCGATTGTGGTGTGCTGGCCATTAAGATCTATCATTAGTTTCATTC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCGATTGTGGTGTGCTGGCCATTAAGATCTATCATTAGTTTCATTC  637

seq1  TACCAATATCCACTGAGACACCCTCAAGCTCTCTGAAACTGTGGTTAACA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAATATCCACTGAGACACCCTCAAGCTCTCTGAAACTGTGGTTAACA  687

seq1  CAATCATGGGATTACAAACCACTTCATCTGTAACAAATTTTCAATCAAAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCATGGGATTACAAACCACTTCATCTGTAACAAATTTTCAATCAAAA  737

seq1  TACACACCTAACTTATTAAGTTACATTTCCAGCCGACTTTGTATTCCATT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACACCTAACTTATTAAGTTACATTTCCAGCCGACTTTGTATTCCATT  787

seq1  TTCTCCCTGCATTCTGCTGGAAGCATTCTCAAATAGCAAAATATAATACT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCCTGCATTCTGCTGGAAGCATTCTCAAATAGCAAAATATAATACT  837

seq1  TCCCATGTTATGTGTTGCCAGGCAATCAGGGCAGAAATAATTAACACGAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATGTTATGTGTTGCCAGGCAATCAGGGCAGAAATAATTAACACGAA  887

seq1  CAAGTGGACTGCCAGTATCCTGCTGAATGGTTCTGGAAAGAGTTCAAATA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGGACTGCCAGTATCCTGCTGAATGGTTCTGGAAAGAGTTCAAATA  937

seq1  TGACAAGCATTCTTAGCTGTCCCTTCTGGGACACGTGCTCTGAAATAACA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAGCATTCTTAGCTGTCCCTTCTGGGACACGTGCTCTGAAATAACA  987

seq1  GTTTGAAAGGACAACTGCCAAATCCAGTTTCAAACAGTTTGACAGCACTA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAAAGGACAACTGCCAAATCCAGTTTCAAACAGTTTGACAGCACTA  1037

seq1  GAGAATTTCATTCTAAAATCTGACTTCGTTTTTATTTAAAGGAGAATTC  1095
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTTCATTCTAAAATCTGACTTCGTTTTTATTTAAAGGAGAATTC  1086