BAC Information

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BAC

Clone NameB6Ng01-241B11
Chromosome3 (Build37)
Map Location 79,688,027 - 79,689,114
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC383883, LOC100041748, LOC100041716, LOC100041725, LOC100041766, Rapgef2, LOC100041741, LOC100041793, LOC667613, Ppid, Etfdh, 4930579G24Rik, Rxfp1, Tmem144
Downstream gene1110032E23Rik, EG626797, Gria2, Glrb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-241B11.bB6Ng01-241B11.g
ACCGA051095GA051096
length1,1971,088
definitionB6Ng01-241B11.b B6Ng01-241B11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagagcaagccattgctgtt
ctgttcaggaatttttcccctgtacccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
cctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagtttttatcata
cagatctttttacttcccttagttagagtcacgccgagatatttttatat
tatttgtgactattgagaaggtgttgtttccctaatttcttctcagcctg
tttattctttgtgtagaagaaagcattgacttgtttggttattttatatc
cagctacttcacgaagctgttatcaaggtttaggagtcctctggtggaat
tttagtcactaatattacctatccatatccatctggcaaaagggaacttg
acttcctctttcccaacttgtatatccccctgtgatccatctctcct
gaattcctgactctaatgcacagaactttgaaaggctgaggcacgtaagg
agaacatatttcatggccaagggtgttccacctttcaaacatctcggctc
agccttaaaagctgccgccttctaacagcggagcaaaatgatttgtaaac
tggctgctgcgccgttttcagacacgtgaggttctttttaaagatgacta
aaaaaataaaaaataaaatttaattttgaatttctccaaacacagctcag
acccagttttcattcaaacaactttctgctcctttcagcccctgggagcc
ccctagtgtctcatttgctaagcgacacagaaatggcagccttgggaagc
tgaagtgatctgaagtgttttgctggagttggcggagaccctgttgccaa
ataaataccttagaaaaatgaggagtgcccactgacccctgcctgacccc
acggagttgggaaggggaaactggacgccagagtccagggcctgcaactt
accttacatctgggctgtttgcagactaactcttgtctcccaccagttct
cgatgggggtaaaacggccaggaaaggtagacaaagctaagaagggggtc
actggaaatgagtagagaaacggaagcgtgagataagagtggggtgtagg
gagatgagaaggttcttgcagcatgcaaatgaacacagcaacagccctca
gaaggcagcctggaccccttctgattggaggtcttctgaaaaacaggtta
gtgattggcctggtcatttgcatgtcctggcacaaaaggcagatcagatg
accttggggtctcactgggcttacttgtctctgcttccacagcaaacaga
atcaaacaagaagcccaccaaatgggatagggacgattaccccccttttt
agagaaaggcttgtgatgtggttgggaaatgaaaataatagaataatgat
gctgtaaatcctttaaaatatcgggttacatggcaaaaaaaaagcaaaga
ttttcccattctcaactatttcttcctcttaagtttatgatcattcatga
aagaggaccaatccgagatggaacagaaccttaagttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_79688027_79689114
seq2: B6Ng01-241B11.g_67_1154 (reverse)

seq1  GAACTTTAAGGTTCCTGTCCATCTCTGATTTGTCTCTTTTCATGATGTAT  50
      |||| |||||||||   |||||||| |||| |||   ||||||||   ||
seq2  GAAC-TTAAGGTTCTGTTCCATCTCGGATTGGTCCTCTTTCATGAATGAT  49

seq1  CATAACTTTTAAAGAGGAAG-AATAGTTTGAGAATGGGAAAATCTTTGCT  99
      |||||  ||  ||||||||| ||||| |||||||||||||||||||||||
seq2  CATAAACTT--AAGAGGAAGAAATAG-TTGAGAATGGGAAAATCTTTGCT  96

seq1  TTTTTTTTTGGCATTGTAACACGATATTTT-AAGGATTATACAGCATCA-  147
      ||||||||  ||  |||||| ||||||||| ||||||| |||||||||| 
seq2  TTTTTTTT--GCCATGTAACCCGATATTTTAAAGGATT-TACAGCATCAT  143

seq1  TATTCTATTATTTTCATTTCCC-ACCACATCACAGCCTTTTCTCTAAAAA  196
      |||||||||||||||||||||| |||||||||||  | ||||||||||||
seq2  TATTCTATTATTTTCATTTCCCAACCACATCACAAGCCTTTCTCTAAAAA  193

seq1  -GGGGGTAATCGTCCCTATCCCA-TTGGT-GGCTTCTTGTTTGATTCTGT  243
       |||||||||||||||||||||| ||||| ||||||||||||||||||||
seq2  GGGGGGTAATCGTCCCTATCCCATTTGGTGGGCTTCTTGTTTGATTCTGT  243

seq1  TTGCTGTGGAAGCAGAGACAAGTAAGCCCAGTGAGACCCCAAGGTCATCT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGTGGAAGCAGAGACAAGTAAGCCCAGTGAGACCCCAAGGTCATCT  293

seq1  GATCCTGCC-TTTGTGCCAGGACATGCAAATGACCCAGGCCAATCACTAA  342
      ||| ||||| ||||||||||||||||||||||| ||||||||||||||||
seq2  GAT-CTGCCTTTTGTGCCAGGACATGCAAATGA-CCAGGCCAATCACTAA  341

seq1  CCTG-TTTTCAGAAGACCTCCAATCAGAAGGGGTCCAGGCTGCCTTCTGA  391
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTTTTCAGAAGACCTCCAATCAGAAGGGGTCCAGGCTGCCTTCTGA  391

seq1  GGGCTGTTGCTGTGTTCATTTGCATGCTGCAAGAACCTTCTCATCTCCCT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGTTGCTGTGTTCATTTGCATGCTGCAAGAACCTTCTCATCTCCCT  441

seq1  ACACCCCACTCTTATCTCACGCTTCCGTTTCTCTACTCATTTCCAGTGAC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCCACTCTTATCTCACGCTTCCGTTTCTCTACTCATTTCCAGTGAC  491

seq1  CCCCTTCTTAGCTTTGTCTACCTTTCCTGGCCGTTTTACCCCCATCGAGA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTCTTAGCTTTGTCTACCTTTCCTGGCCGTTTTACCCCCATCGAGA  541

seq1  ACTGGTGGGAGACAAGAGTTAGTCTGCAAACAGCCCAGATGTAAGGTAAG  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTGGGAGACAAGAGTTAGTCTGCAAACAGCCCAGATGTAAGGTAAG  591

seq1  TTGCAGGCCCTGGACTCTGGCGTCCAGTTTCCCCTTCCCAACTCCGTGGG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGGCCCTGGACTCTGGCGTCCAGTTTCCCCTTCCCAACTCCGTGGG  641

seq1  GTCAGGCAGGGGTCAGTGGGCACTCCTCATTTTTCTAAGGTATTTATTTG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGCAGGGGTCAGTGGGCACTCCTCATTTTTCTAAGGTATTTATTTG  691

seq1  GCAACAGGGTCTCCGCCAACTCCAGCAAAACACTTCAGATCACTTCAGCT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACAGGGTCTCCGCCAACTCCAGCAAAACACTTCAGATCACTTCAGCT  741

seq1  TCCCAAGGCTGCCATTTCTGTGTCGCTTAGCAAATGAGACACTAGGGGGC  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAGGCTGCCATTTCTGTGTCGCTTAGCAAATGAGACACTAGGGGGC  791

seq1  TCCCAGGGGCTGAAAGGAGCAGAAAGTTGTTTGAATGAAAACTGGGTCTG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGGGCTGAAAGGAGCAGAAAGTTGTTTGAATGAAAACTGGGTCTG  841

seq1  AGCTGTGTTTGGAGAAATTCAAAATTAAATTTTATTTTTTATTTTTTTAG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTGTTTGGAGAAATTCAAAATTAAATTTTATTTTTTATTTTTTTAG  891

seq1  TCATCTTTAAAAAGAACCTCACGTGTCTGAAAACGGCGCAGCAGCCAGTT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTTTAAAAAGAACCTCACGTGTCTGAAAACGGCGCAGCAGCCAGTT  941

seq1  TACAAATCATTTTGCTCCGCTGTTAGAAGGCGGCAGCTTTTAAGGCTGAG  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATCATTTTGCTCCGCTGTTAGAAGGCGGCAGCTTTTAAGGCTGAG  991

seq1  CCGAGATGTTTGAAAGGTGGAACACCCTTGGCCATGAAATATGTTCTCCT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGATGTTTGAAAGGTGGAACACCCTTGGCCATGAAATATGTTCTCCT  1041

seq1  TACGTGCCTCAGCCTTTCAAAGTTCTGTGCATTAGAGTCAGGAATTC  1088
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGTGCCTCAGCCTTTCAAAGTTCTGTGCATTAGAGTCAGGAATTC  1088