BAC Information

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BAC

Clone NameB6Ng01-241G06
Chromosome8 (Build37)3 (Build37)
Map Location 6,150,865 - 6,151,55139,567,055 - 39,567,092
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC623409, LOC669429, LOC100040360
Downstream geneEG665127, EG546032
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-241G06.bB6Ng01-241G06.g
ACCGA051315GA051316
length1,049595
definitionB6Ng01-241G06.b B6Ng01-241G06.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(6,150,865 - 6,151,551)(39,567,055 - 39,567,092)
sequence
gaattcattaaagacaaaataaatgcaataaagagcttaaactttgtcat
taagactgaccatgttctcattcatttatgaacccattgcagtacagaaa
ctaatttctttgtcacttaatttatgagatggaaattattttagttagcc
tcatgcttgtgaaattcaacccttaataaatacagtcttgtgtcttagtc
aaggtttctattcctggacaacacatcatgaccaagaagcaggttgggga
ggaaagggtttattcggcttacacttccatactgttgttcatcaccaaag
gaagtcaggactggaactcaagcaggtcagaaagcagaagctgatgcaga
agccatggagggatgttctttactggcttgcttcccctggcttgcttagc
ctgctctcttatagaatcaagactaccagcccagagatggtcccacccac
aaggcgcctttcccccttgatcactagttgagaaaatgccttatagttgg
atctcatggatgcatttcctgggatccaactcacgatcttctgggctcca
agggcttcggtcacttctccagccataccctttgtagcacatgtgttgtc
ctctaggctccagatgcctgtactccactgctgctgctcttggtggtcat
ctcatggtactggcatgtccaaaacactgcatgaccccttcagtcctggg
ctgtcaattgcaactgaagctgcaccttcaccaatggccttctatggcct
ctcacagtgccgcgcctcagctgctctgtgtgacaccttcatgccttcaa
aaccagtaccacctgggtgacccttacacattaccaagtcccgctgcagc
aggactacaaccttggctatctctggaacacagccctctttgtgctttca
gaaaacacttcccagaagatgtcacctcaacgatgctggtctcttcttaa
tcaccactaatttcttagctccagctaaccagcatcatagtcccagtatg
caaaagttcacttagtagttctggtctcttgtaatcacagctgattttt

gaattctgtggactgtattttgtatattctgtactttttatttttttatt
tttgctaatatccacttattagtgagtacataccatgtgtgtccttttgg
gtctgagttatctcactcaggatggtattttctagttccatccatttgcc
tgcaacactcaggatgtcttcattcttaatagctgagtagtgtacatgaa
ccacattttctctatccattcttctgtcttgggacatctaggttgttttc
agcttctggctatcacaaataaggcctctatgaacatagtggaacacatg
cccctgtggtctagtagggcatcttttgggtgtattccccagagtggtac
agcttggtcttcaggtagatctatttctagttttctgaatacactccaga
ttgatttccagagtggttgtaccagtttgcaatcccaccagcaatggatg
aatgttcctctttctcctcatcctctcaaacatgtgttgtcacctggggt
tttgatcctagccattctgattggtgtacacctcaccctcgagagacact
ggaggccccagggagtttagaggtcaggtggggttggggttgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_6150865_6151551
seq2: B6Ng01-241G06.b_43_729

seq1  GAATTCATTAAAGACAAAATAAATGCAATAAAGAGCTTAAACTTTGTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAAAGACAAAATAAATGCAATAAAGAGCTTAAACTTTGTCAT  50

seq1  TAAGACTGACCATGTTCTCATTCATTTATGAACCCATTGCAGTACAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACTGACCATGTTCTCATTCATTTATGAACCCATTGCAGTACAGAAA  100

seq1  CTAATTTCTTTGTCACTTAATTTATGAGATGGAAATTATTTTAGTTAGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTCTTTGTCACTTAATTTATGAGATGGAAATTATTTTAGTTAGCC  150

seq1  TCATGCTTGTGAAATTCAACCCTTAATAAATACAGTCTTGTGTCTTAGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCTTGTGAAATTCAACCCTTAATAAATACAGTCTTGTGTCTTAGTC  200

seq1  AAGGTTTCTATTCCTGGACAACACATCATGACCAAGAAGCAGGTTGGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTTCTATTCCTGGACAACACATCATGACCAAGAAGCAGGTTGGGGA  250

seq1  GGAAAGGGTTTATTCGGCTTACACTTCCATACTGTTGTTCATCACCAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGGTTTATTCGGCTTACACTTCCATACTGTTGTTCATCACCAAAG  300

seq1  GAAGTCAGGACTGGAACTCAAGCAGGTCAGAAAGCAGAAGCTGATGCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCAGGACTGGAACTCAAGCAGGTCAGAAAGCAGAAGCTGATGCAGA  350

seq1  AGCCATGGAGGGATGTTCTTTACTGGCTTGCTTCCCCTGGCTTGCTTAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATGGAGGGATGTTCTTTACTGGCTTGCTTCCCCTGGCTTGCTTAGC  400

seq1  CTGCTCTCTTATAGAATCAAGACTACCAGCCCAGAGATGGTCCCACCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTCTTATAGAATCAAGACTACCAGCCCAGAGATGGTCCCACCCAC  450

seq1  AAGGCGCCTTTCCCCCTTGATCACTAGTTGAGAAAATGCCTTATAGTTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCGCCTTTCCCCCTTGATCACTAGTTGAGAAAATGCCTTATAGTTGG  500

seq1  ATCTCATGGATGCATTTCCTGGGATCCAACTCACGATCTTCTGGGCTCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCATGGATGCATTTCCTGGGATCCAACTCACGATCTTCTGGGCTCCA  550

seq1  AGGGCTTCGGTCACTTCTCCAGCCATACCCTTTGTAGCACATGTGTTGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTTCGGTCACTTCTCCAGCCATACCCTTTGTAGCACATGTGTTGTC  600

seq1  CTCTAGGCTCCAGATGCCTGTACTCCACTGCTGCTGCTCTTGGTGGTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGGCTCCAGATGCCTGTACTCCACTGCTGCTGCTCTTGGTGGTCAT  650

seq1  CTCATGGTACTGGCATGTCCAAAACACTGCATGACCC  687
      |||||||||||||||||||||||||||||||||||||
seq2  CTCATGGTACTGGCATGTCCAAAACACTGCATGACCC  687


seq1: chr3_39567055_39567092
seq2: B6Ng01-241G06.g_621_658 (reverse)

seq1  CCCCCACCCCCACCCCACCAGACCTCTAAACTCCCTGG  38
      |||| ||||| |||||||| ||||||||||||||||||
seq2  CCCCAACCCCAACCCCACCTGACCTCTAAACTCCCTGG  38


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