BAC Information

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BAC

Clone NameB6Ng01-242A12
Chromosome3 (Build37)
Map Location 18,359,621 - 18,360,179
singlet/doubletsinglet
Overlap genenone
Upstream geneENSMUSG00000074674, LOC100040120, Cypt12, LOC545508, Bhlhb5, Cyp7b1
Downstream geneLOC622921, LOC100040153, Armc1, Mtfr1, Pde7a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-242A12.bB6Ng01-242A12.g
ACCGA051790GA051791
length1,210994
definitionB6Ng01-242A12.b B6Ng01-242A12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaagtttctgggctaatatcgacttaacagtgagtgtatatcat
gtcagggtttttttgtgtgtgtgtgtgtgattcggttacctcactaagga
tgataccctccagatacatgcatttgcctaggaatttcataaattggttg
tttttaatagctgagtagtactccattgtgtaaatgtaccacattttctg
tatccattcctctgttgaggaacatctgggttctttccagcttctggcta
ttataaataaggctgctatgaacaaagtagagcatgtgttgttattacca
gttggaagatcttctggatatatgcccaggagaggtattgctggatcctc
tggcagtattatgaccaattttctgagcaaccaccagactgatttctaca
gtggttgtagaagcttgcaatatcacaaaaaatggaggcgtgttcctctt
tctccacatcctctccagcatctgctgtcatctgagtattcgatcttagc
cattctgactggtgtgaggtggaatctcagggttgttttcatttgcattt
ccctgatgactaaggatgttgaacattttttcgggtgctttcagtcattc
gatattcctcagttgagaatttgtttagctctgtgccccatttttaatgg
ggttatttgattttctggagtccatcttcttgcattctttatatgtatat
tggatattagtcccctatctgatttagaattggtaaagatcctttcctag
tctgttggtgtcctttttgtcttattgacagtgtgttttgccttatagaa
gctttgcgattttatggggtcccatttgtcaattctcaatcttacggtac
aagccattgttgttctattcaggaatttttcccctgtgcccatatctttg
tggctttaagaaattagggaaacaacacccttcacaatagtcacaataat
ataaatatcttggtgtgacactaactaagatctgtatgatagaacttcaa
gtctctgaagaaagaaaaacaaagatctcagaagatgggaagatcctcct
catgctcattggaattggccaggaatcatatatagttaaaattggcctat
tctttggccaaagcatctaccaaatttcaatgccatcccctccatgaaag
ttccaacctcgagtctttcaaggaattagaaaaggggcaactctggtgca
cacgatactc
gaattctacttatggtcaaatccacaaagacttgatgcttaaagaggttc
taaaggcactacaagaaaaccagcaactgatcaaagtagtcagaactagg
attatgatatgccccatgtttccacagagtatgcattcattcttgaaaaa
acaaaaatgccaaattaaaataaagagtgtctttgatctttggatacatg
gcagtggataaatatatacatttattgatattattattacttatagtaat
aagtatcaataaccagaaacaaaaacctcaacaattaactaatttctaca
tacattccacaatcaatgcagggaacttctgaaaacaaatgtgctgatat
tgtcccaacactaagtcattctctaacaccagctagttgtcctataatgg
aattaaattctaaagctagttgcctacaactcgtattagattccatagct
tattcctttagacttgagtgcttttgcttcagatggtgctgggttctaat
gtgttctcaggattcatgcatggggaacttcgtcctcatgtggtaatgtt
ggaaggaagagcttagacagaaatgattagactttgaggagtagccttta
tgaattgattcttgccattaccacagaaaaggaaaatgttgggcaccctt
tgtaattcacctttgctctttctgccctgatctctgacaaatggcccttg
gcagatgtgggctcctttacacggagcttccaaaattctaaacctatggg
aaataaatgtgtgttcttgataaattaaccagtctgaggaactccattat
agcagcacaaaacagaaaacgacaggccagtcactagttgcagattgtgg
ccaaagacttggcagtgatataaaagtcagaattctcacaatctctctct
tgatcctaataaggcactgggatggctcacaaagtcaggaatcactttac
tgtattcatcattttatataaataatttacaagtatatgtgaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_18359621_18360179
seq2: B6Ng01-242A12.g_68_626 (reverse)

seq1  CTTCCTTCCAACATTACCACATGAGGACGAAGTTCCCCATGCATGAATCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTCCAACATTACCACATGAGGACGAAGTTCCCCATGCATGAATCC  50

seq1  TGAGAACACATTAGAACCCAGCACCATCTGAAGCAAAAGCACTCAAGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAACACATTAGAACCCAGCACCATCTGAAGCAAAAGCACTCAAGTCT  100

seq1  AAAGGAATAAGCTATGGAATCTAATACGAGTTGTAGGCAACTAGCTTTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAATAAGCTATGGAATCTAATACGAGTTGTAGGCAACTAGCTTTAG  150

seq1  AATTTAATTCCATTATAGGACAACTAGCTGGTGTTAGAGAATGACTTAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAATTCCATTATAGGACAACTAGCTGGTGTTAGAGAATGACTTAGT  200

seq1  GTTGGGACAATATCAGCACATTTGTTTTCAGAAGTTCCCTGCATTGATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGACAATATCAGCACATTTGTTTTCAGAAGTTCCCTGCATTGATTG  250

seq1  TGGAATGTATGTAGAAATTAGTTAATTGTTGAGGTTTTTGTTTCTGGTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATGTATGTAGAAATTAGTTAATTGTTGAGGTTTTTGTTTCTGGTTA  300

seq1  TTGATACTTATTACTATAAGTAATAATAATATCAATAAATGTATATATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATACTTATTACTATAAGTAATAATAATATCAATAAATGTATATATTT  350

seq1  ATCCACTGCCATGTATCCAAAGATCAAAGACACTCTTTATTTTAATTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACTGCCATGTATCCAAAGATCAAAGACACTCTTTATTTTAATTTGG  400

seq1  CATTTTTGTTTTTTCAAGAATGAATGCATACTCTGTGGAAACATGGGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTGTTTTTTCAAGAATGAATGCATACTCTGTGGAAACATGGGGCA  450

seq1  TATCATAATCCTAGTTCTGACTACTTTGATCAGTTGCTGGTTTTCTTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATAATCCTAGTTCTGACTACTTTGATCAGTTGCTGGTTTTCTTGTA  500

seq1  GTGCCTTTAGAACCTCTTTAAGCATCAAGTCTTTGTGGATTTGACCATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTTTAGAACCTCTTTAAGCATCAAGTCTTTGTGGATTTGACCATAA  550

seq1  GTAGAATTC  559
      |||||||||
seq2  GTAGAATTC  559