BAC Information

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BAC

Clone NameB6Ng01-242L03
Chromosome3 (Build37)
Map Location 112,126,376 - 112,127,461
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC625585, EG229746
Downstream geneLOC668717, Utp14B-ps, EG433643, OTTMUSG00000022462, LOC668723, Amy2-2, Amy2-1, LOC100043684, LOC100043686
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-242L03.bB6Ng01-242L03.g
ACCGA052271GA052272
length1,2061,082
definitionB6Ng01-242L03.b B6Ng01-242L03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttgtttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtccggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatattgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagtttttatcata
cagatctttcacttccttagttagagtcacgccgagatatttttatatta
tttgtgactattgagaagggtgttgtttccctaatttctttctcagcctg
tttattctttgtgtagagaaaggcccattgactttgtttgagtttaattt
attattccagctactttcacccgaaagccttgtttatcagtttagagttc
ctctggtgaatttttaaggatctcctttaatattgcatatccaattcatc
tgcaagagtgatttttttggagacgtcctccctccctttccacacttatc
tgatca
gaattcatgagcttagatcaattatttaaattgtcttataatttctttgg
tgtgaaacaatgtctcaccattacattattataactacagtattaaaata
aaataatatgaacagagaatttgaataatatctaatcctcttcaggtttc
aattggcatttgcttttacatttagttactcaaacttcccaatgagatta
ccaatgtaattgaaatgaacatttgcctagtctgttaaatacaaatatca
ctaaattgcccttttataaggtgcaccaatgggtatagcactgcctccta
gtttacatagtttagtgtattagaaaacaggatttagatgcctacatgca
ttcagaggatataaaggacattgtgtttttcagaagactcagagatagtt
aaacaccaatgccaaggtgctttcctttattcttttggttcactgatatg
aatcaatttattttagagggttttcccctttatgttcatgtcagaagtaa
gtttttaactcattatttattttctttttattatttaaatcaatttaaat
tttaaatatattttgattttatttttcctctcttccaaatactttcagat
cttttcccctttcctaccatttcagcttgaagttctttctccaaaaagca
aacaacgaacacacacagaaacaaacaaaaaaccaattgagcaacaaaat
acagcaagacaaaaaaatacaaatatctcacaatcaaaccaaataaaagc
acacaaaaggagctgaattggaaaattaaaatttatgttcatatgtctga
gttaaatcagaaatgatggaaaaaataagaattagatacattattgtgtt
gtcaagataggtgtgagagtcttaaagacaatcttaatggtgatcagtaa
gaatctagtttttttttaagtctaggctttgagaagaccttctgttttct
tatactatttctctttgttatttgacaaggtgaacgtgtactttcaatgt
cacatttttttttatttcatagtcataaaaaataaaaacgctttatatct
tgctactgcctagctgatttatttctttatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_112126376_112127461
seq2: B6Ng01-242L03.g_64_1145 (reverse)

seq1  TGATAAAGAAAATAAATCAAGCTAAGGCAGTAAGCAAAGATATAAAGCGT  50
      |||||||| ||||||||| |||| ||||||| ||| ||||||||||||||
seq2  TGATAAAG-AAATAAATC-AGCT-AGGCAGT-AGC-AAGATATAAAGCGT  45

seq1  TTTTAATTTTTTATGACTATGAAAT--AAAAAAATGTGACATTGAAAGTA  98
      |||| ||||||||||||||||||||  |||||||||||||||||||||||
seq2  TTTT-ATTTTTTATGACTATGAAATAAAAAAAAATGTGACATTGAAAGTA  94

seq1  CACGTTCACCTTGTCAAATAACAAAGGAGAAATAGTATAAGAAAACAGAG  148
      ||||||||||||||||||||||||| ||||||||||||||||||||||| 
seq2  CACGTTCACCTTGTCAAATAACAAA-GAGAAATAGTATAAGAAAACAGAA  143

seq1  GTCCTTCTCAAAGCCTAGACTT-AAAAAAAACTAGATTCTTACTGATCAC  197
      |  ||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GGTCTTCTCAAAGCCTAGACTTAAAAAAAAACTAGATTCTTACTGATCAC  193

seq1  CATTAAGATTGTCTTTAAGACTCTCACACCTATCTTGACAACACAATAAT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAGATTGTCTTTAAGACTCTCACACCTATCTTGACAACACAATAAT  243

seq1  GTATCTAATTCTTATTTTTTCCATCATTTCTGATTTAACTCAGACATATG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTAATTCTTATTTTTTCCATCATTTCTGATTTAACTCAGACATATG  293

seq1  AACATAAATTTTAATTTTCCAATTCAGCTCCTTTTGTGTGCTTTTATTTG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAAATTTTAATTTTCCAATTCAGCTCCTTTTGTGTGCTTTTATTTG  343

seq1  GTTTGATTGTGAGATATTTGTATTTTTTTGTCTTGCTGTATTTTGTTGCT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGATTGTGAGATATTTGTATTTTTTTGTCTTGCTGTATTTTGTTGCT  393

seq1  CAATTGGTTTTTTGTTTGTTTCTGTGTGTGTTCGTTGTTTGCTTTTTGGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGGTTTTTTGTTTGTTTCTGTGTGTGTTCGTTGTTTGCTTTTTGGA  443

seq1  GAAAGAACTTCAAGCTGAAATGGTAGGAAAGGGGAAAAGATCTGAAAGTA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAACTTCAAGCTGAAATGGTAGGAAAGGGGAAAAGATCTGAAAGTA  493

seq1  TTTGGAAGAGAGGAAAAATAAAATCAAAATATATTTAAAATTTAAATTGA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAAGAGAGGAAAAATAAAATCAAAATATATTTAAAATTTAAATTGA  543

seq1  TTTAAATAATAAAAAGAAAATAAATAATGAGTTAAAAACTTACTTCTGAC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATAATAAAAAGAAAATAAATAATGAGTTAAAAACTTACTTCTGAC  593

seq1  ATGAACATAAAGGGGAAAACCCTCTAAAATAAATTGATTCATATCAGTGA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACATAAAGGGGAAAACCCTCTAAAATAAATTGATTCATATCAGTGA  643

seq1  ACCAAAAGAATAAAGGAAAGCACCTTGGCATTGGTGTTTAACTATCTCTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAAGAATAAAGGAAAGCACCTTGGCATTGGTGTTTAACTATCTCTG  693

seq1  AGTCTTCTGAAAAACACAATGTCCTTTATATCCTCTGAATGCATGTAGGC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTCTGAAAAACACAATGTCCTTTATATCCTCTGAATGCATGTAGGC  743

seq1  ATCTAAATCCTGTTTTCTAATACACTAAACTATGTAAACTAGGAGGCAGT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAATCCTGTTTTCTAATACACTAAACTATGTAAACTAGGAGGCAGT  793

seq1  GCTATACCCATTGGTGCACCTTATAAAAGGGCAATTTAGTGATATTTGTA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATACCCATTGGTGCACCTTATAAAAGGGCAATTTAGTGATATTTGTA  843

seq1  TTTAACAGACTAGGCAAATGTTCATTTCAATTACATTGGTAATCTCATTG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACAGACTAGGCAAATGTTCATTTCAATTACATTGGTAATCTCATTG  893

seq1  GGAAGTTTGAGTAACTAAATGTAAAAGCAAATGCCAATTGAAACCTGAAG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTTTGAGTAACTAAATGTAAAAGCAAATGCCAATTGAAACCTGAAG  943

seq1  AGGATTAGATATTATTCAAATTCTCTGTTCATATTATTTTATTTTAATAC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTAGATATTATTCAAATTCTCTGTTCATATTATTTTATTTTAATAC  993

seq1  TGTAGTTATAATAATGTAATGGTGAGACATTGTTTCACACCAAAGAAATT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTTATAATAATGTAATGGTGAGACATTGTTTCACACCAAAGAAATT  1043

seq1  ATAAGACAATTTAAATAATTGATCTAAGCTCATGAATTC  1086
      |||||||||||||||||||||||||||||||||||||||
seq2  ATAAGACAATTTAAATAATTGATCTAAGCTCATGAATTC  1082