BAC Information

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BAC

Clone NameB6Ng01-243L04
Chromosome3 (Build37)
Map Location 12,229,077 - 12,230,217
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667999
Downstream geneEG621965, LOC100039798, EG668033, LOC668037
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-243L04.bB6Ng01-243L04.g
ACCGA053012GA053013
length1,1821,130
definitionB6Ng01-243L04.b B6Ng01-243L04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattccattgaggactgactattcaagggctctcagtccctgata
atatcctgttctggatctctgtatttgttcctgtctgttgcaagaagctt
ctttggttatggctaaacagggtactgatctatgagtatagcagaatgta
aggaattcatttatcattacatgtttttctttcttttgacaagtattatg
tggtcttaccctagggctctaggctatctactttctagttctttgtcctt
gaagtattgtgcacaatgggtctcattttgtggagtaggccttaatacta
atcagttactagttggttgctcacacaagttttgtgccaacatagcccta
gcatatcttgcagatagtataccatagtaatttaagtattttctgagtgg
gctggtgtcttagtgtttcatgtgaagggacaacatgaccaaggcaactc
ttatgaaggcaaaccttataattgggagtagcttaaagtttcagaggttc
agtccattatcatcatggtcaaaatcatgacatcatgcagcagacttggt
gctaaaaaaccctagtgctctacatcttgatccaagggcagacagaagga
gactgttttgtgcaggcacacagtagggagctctgattccaaactgggtg
aatatgaacactaggaaatatcaagttccacaaacatgttaccttgagaa
gaaccacacctactttgaaaaggccacagctcctaatagtgccacattcc
attgaccaagcattcaagcacatgagcctatgtgcgccatcgctattcaa
accaccacagttagtttttatgtttctcttttaagagcattctgagtaca
tttctataccaaagatactaaaatatataggaaaaggaactatgaaagca
tcagcccaataatatttaatgagttgtataagtgttgtcttcagaaatag
aactttgctgtcagtttgtggagagcaaccaacagtatggacaccctagt
tgtttgagattcctatgactacaacttgattagatgtaaccatctcaata
ctgatgctctatttttgtgacagacacatcttatcattgggactctgtct
ctcaatatagcattcattgattgcctcatatatggctataccagttagaa
gtttcagatttggaagttgttaggatgacgac

gaattccttatatactgcccctgccccactttgggtccctaaaaatttat
gtgagaatgcttgctttgcttagctaaataaagtaccacttaaactgtct
ttgtcttatgattaaattctctacttcaaaaataagaatccaaagactcc
tagtattttagccttaatttatatgaaagttgagtgtacaaacaaaacag
actatatgagatcaaaataaatgtagttttcaattcaagtttataattgg
atgcatcagatttaacaagaatagtgtctaagcaatgagtactctgacaa
gataatgtgcacatgtagaatgtacccaaaccctgtgagtgaatctgttt
aagacaagaataaacacttagttttcaaattaaacttaaatatgcaactt
aatttcactatacagagtatttttatagaacaaagcaactcttgataatc
tcagtgctctctcactaatactatatctgcacctgtcaccttcttcaaaa
tgttttgaatctagttcatgaaataaagctaaataagagaatgtagacct
ttatattcataaggtgcatgaaatatgattttcaacaaagtgactaaaac
atgaatgaataatggttttgataaacagacattcaaacatttttttattt
tacattttaaatgtatatgcaagtttctggagacaacaagtttagaccag
aggcattgaagttgtgtgtatttatgagagtgatatgaatacttatagta
taagtgtacacaaagacaaagccaagatttaacatatcattgctctagtt
ctatacttctagaaagttttctttaatttttaaaaaatataaccaattat
atataatttaaaagcattggaaataactggtatattttccacattggagg
tctgttgaggatgggaactctagtccatctgtatcacagagtcctgtaga
actttcacattaatgtcttcattagtactgaaatgattagaacttttctt
caccaatgtatagttgaggtgtgtgtgagcaatgctccatttcatcatag
ccatatagtaatgaatcatataagcgttagaataaatactgtgacagatt
tttctgtcagcattcagagattacctgatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_12229077_12230217
seq2: B6Ng01-243L04.g_64_1193 (reverse)

seq1  CATCA-GTAATCTCTTAAAATGCTGACAGAAAAATCTGTCCACAGGTATT  49
      ||||| |||||||||   ||||||||||||||||||||| |||| |||||
seq2  CATCAGGTAATCTCT--GAATGCTGACAGAAAAATCTGT-CACA-GTATT  46

seq1  TTATCT-ACGCTTATATGATTTCATTTACTATAT-GCTATGATGGAATTG  97
      |  ||| |||||||||||| |||| ||||||||| |||||||| ||| ||
seq2  TATTCTAACGCTTATATGA-TTCA-TTACTATATGGCTATGAT-GAAATG  93

seq1  GAGCAATTTGCTCACACAACACCTCAACTATACATTGGGTGAAGAAAAGT  147
      |||||  |||||||||| |||||||||||||||||| |||||||||||| 
seq2  GAGCA--TTGCTCACAC-ACACCTCAACTATACATT-GGTGAAGAAAAG-  138

seq1  TTCTAAATCATTTCAGTACCTAATGAAGACATTAAATGTGAAAGTTCTAC  197
      |||| ||||||||||||| |||||||||||||| ||||||||||||||||
seq2  TTCT-AATCATTTCAGTA-CTAATGAAGACATT-AATGTGAAAGTTCTAC  185

seq1  AGGACTCTGTGATACAGATGGACTAGAGTT-CCATCCTCAACAGACCTCC  246
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AGGACTCTGTGATACAGATGGACTAGAGTTCCCATCCTCAACAGACCTCC  235

seq1  AATGTGGAAAATATACCAGTTATTTCCAATGCTTTTAAATTATATATAAT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGGAAAATATACCAGTTATTTCCAATGCTTTTAAATTATATATAAT  285

seq1  TGGTTATATTTTTTAAAAATTAAAGAAAACTTTCTAGAAGTATAGAACTA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTATATTTTTTAAAAATTAAAGAAAACTTTCTAGAAGTATAGAACTA  335

seq1  GAGCAATGATATGTTAAATCTTGGCTTTGTCTTTGTGTACACTTATACTA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAATGATATGTTAAATCTTGGCTTTGTCTTTGTGTACACTTATACTA  385

seq1  TAAGTATTCATATCACTCTCATAAATACACACAACTTCAATGCCTCTGGT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTATTCATATCACTCTCATAAATACACACAACTTCAATGCCTCTGGT  435

seq1  CTAAACTTGTTGTCTCCAGAAACTTGCATATACATTTAAAATGTAAAATA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACTTGTTGTCTCCAGAAACTTGCATATACATTTAAAATGTAAAATA  485

seq1  AAAAAATGTTTGAATGTCTGTTTATCAAAACCATTATTCATTCATGTTTT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATGTTTGAATGTCTGTTTATCAAAACCATTATTCATTCATGTTTT  535

seq1  AGTCACTTTGTTGAAAATCATATTTCATGCACCTTATGAATATAAAGGTC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACTTTGTTGAAAATCATATTTCATGCACCTTATGAATATAAAGGTC  585

seq1  TACATTCTCTTATTTAGCTTTATTTCATGAACTAGATTCAAAACATTTTG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTCTCTTATTTAGCTTTATTTCATGAACTAGATTCAAAACATTTTG  635

seq1  AAGAAGGTGACAGGTGCAGATATAGTATTAGTGAGAGAGCACTGAGATTA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGGTGACAGGTGCAGATATAGTATTAGTGAGAGAGCACTGAGATTA  685

seq1  TCAAGAGTTGCTTTGTTCTATAAAAATACTCTGTATAGTGAAATTAAGTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAGTTGCTTTGTTCTATAAAAATACTCTGTATAGTGAAATTAAGTT  735

seq1  GCATATTTAAGTTTAATTTGAAAACTAAGTGTTTATTCTTGTCTTAAACA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATTTAAGTTTAATTTGAAAACTAAGTGTTTATTCTTGTCTTAAACA  785

seq1  GATTCACTCACAGGGTTTGGGTACATTCTACATGTGCACATTATCTTGTC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCACTCACAGGGTTTGGGTACATTCTACATGTGCACATTATCTTGTC  835

seq1  AGAGTACTCATTGCTTAGACACTATTCTTGTTAAATCTGATGCATCCAAT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTACTCATTGCTTAGACACTATTCTTGTTAAATCTGATGCATCCAAT  885

seq1  TATAAACTTGAATTGAAAACTACATTTATTTTGATCTCATATAGTCTGTT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAACTTGAATTGAAAACTACATTTATTTTGATCTCATATAGTCTGTT  935

seq1  TTGTTTGTACACTCAACTTTCATATAAATTAAGGCTAAAATACTAGGAGT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGTACACTCAACTTTCATATAAATTAAGGCTAAAATACTAGGAGT  985

seq1  CTTTGGATTCTTATTTTTGAAGTAGAGAATTTAATCATAAGACAAAGACA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGATTCTTATTTTTGAAGTAGAGAATTTAATCATAAGACAAAGACA  1035

seq1  GTTTAAGTGGTACTTTATTTAGCTAAGCAAAGCAAGCATTCTCACATAAA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAGTGGTACTTTATTTAGCTAAGCAAAGCAAGCATTCTCACATAAA  1085

seq1  TTTTTAGGGACCCAAAGTGGGGCAGGGGCAGTATATAAGGAATTC  1141
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGGGACCCAAAGTGGGGCAGGGGCAGTATATAAGGAATTC  1130


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