BAC Information

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BAC

Clone NameB6Ng01-243L15
Chromosome3 (Build37)
Map Location 74,899,803 - 74,900,897
singlet/doubletsinglet
Overlap geneBC050789
Upstream geneLOC619764, LOC667434, LOC100041551, EG667459
Downstream geneSerpini2, Wdr49, Pdcd10, Serpini1, Golph4, Fstl5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-243L15.bB6Ng01-243L15.g
ACCGA053034GA053035
length1,1891,090
definitionB6Ng01-243L15.b B6Ng01-243L15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacaacagatgaatctcgaatggctgagtagcacccaaagaaatg
tccttaagtgatcagagaaatgcaaatcaaaatgaccctgagattccacc
ttacaccaatcagaatggctaagatcaaaatttcgggtgacagcagatgc
tgctgaccatgtagagaaagaggaacactcctccattgctggtcgggttg
aaaactggtacaaccgctctggaaatcaatctggaggttcctaagaaaat
tggaaataggattaactgaagacccagctataccactcttgggaatatag
tcaaaagatgttccgccatgccacaggggcacttgttctactatgtcaaa
tggccttatttgtgataaccagaaactgaaaacaacccatatgtcccatg
aaagaagaatgtatacagaaattatggttcatttacacaatggaatactt
actattctgctattaagaatgaggagatcctgagttttgcaggcaaatgg
atggagctagaaaatatcatcctgagtgaggcaactctgacccaaaacga
cgtgcataataagtgaatattagctttaaaaggtacagaatacccaagat
atagtccacagaactaaaaaatgtcaaaaagctgaaggacccaagtgaag
attcctgaatcccacttgggagagagaataaagcaatcacaagtgggcaa
gaagggagggacctgtgtggaaaagaggacagggggaaagaggggaacat
gatcaggtattgggtagggaaaaaagattgaagctctgagggccagcaga
aagaacggaaatgggcaacctcagtaggtaggaggttgggggactctcca
gaatgcatcagaaccccggaaggtgaaagactgtcaggactgaaagggag
agaccttagatgaaatgttctacagtggtgagagtgatggggttgccatc
ccacagtcaaaactctgacccataactgttcctgtctgaaagaactgcaa
ggataaaatggagaggagctgagaaagatgtcagggacaggctaagtggg
atcagcgcaaggggagtccaagacttgactctattactgagctacgagtg
cacacaaaagcagcctatcatgaactgcttccggaaggacctcacaagag
ctcgatgccagattaacgttcaagcaattggccagagct
gaattcagaccaggctttgaactaggagaaaactacaggtatataggtct
tggggcacctggagtttttagtctctgtgatcaggagctaaggaggttgg
agagagctggctgataggattatgacaggaaattcttcacccagccattt
agttatctggctagttttaaaataataaaactgtctagtgttttctatct
gcagagctgaaatgggcaggtgaagaaagagggcagctgaggcagatgtt
ggcagtttggcaaagttagccttgaggggctgggagaggaacatagctcc
caggaaaagcagccagctgacacttgatagagttgagcaagacctgcagc
agctgagagtctagcctggagcacgggcagaactcccgagaaagcatgat
ttttttttttaagttacacgcaacattcatgtgtttatcagagtttttga
taagtgatcctaataacaaacatctaatggctaggagaagaatgttcagt
atacatacattcagcaagaaactttgctcatcagttgaaggacatgcaca
cacacgagctatggcttacagacagaaagatctcaggagctatcaacagg
gctttgtttaccatattgcttctggctcagcaaccttcccttctgagaat
ttcggtgagattctctaccactcagtctcttgagaaaatggtcttttttt
ttttaaacatacagcacaaagtcctaaagtaaatgggtgcctaaagaatc
ctaggaacaaccaggagagcagagtagaagaaacgaagtgagccaatggg
agaatgtcagcagggaggtcagagagagaagaacctcagctcacaaaatg
gcctctgcccagcaaaagcccctagcattcacatcgaagaaaagaagtct
ctggatgactaaaatgaattaaaggaagaaatcagtgataaaaaatatca
gagaactgggaaattgaaagcacactgctctgctaatgggccatgaaaca
aagggatgctaatgtaatttataataaatggggcatatgttatgcatagt
aactatttcatattgagcaactcttaagtgcagaaaatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_74899803_74900897
seq2: B6Ng01-243L15.g_66_1155

seq1  GAATTCAGACCAGGCTTTGAACTAGGAGAAAACTACAGGTATATAGGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGACCAGGCTTTGAACTAGGAGAAAACTACAGGTATATAGGTCT  50

seq1  TGGGGCACCTGGAGTTTTTAGTCTCTGTGATCAGGAGCTAAGGAGGTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCACCTGGAGTTTTTAGTCTCTGTGATCAGGAGCTAAGGAGGTTGG  100

seq1  AGAGAGCTGGCTGATAGGATTATGACAGGAAATTCTTCACCCAGCCATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGCTGGCTGATAGGATTATGACAGGAAATTCTTCACCCAGCCATTT  150

seq1  AGTTATCTGGCTAGTTTTAAAATAATAAAACTGTCTAGTGTTTTCTATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATCTGGCTAGTTTTAAAATAATAAAACTGTCTAGTGTTTTCTATCT  200

seq1  GCAGAGCTGAAATGGGCAGGTGAAGAAAGAGGGCAGCTGAGGCAGATGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGCTGAAATGGGCAGGTGAAGAAAGAGGGCAGCTGAGGCAGATGTT  250

seq1  GGCAGTTTGGCAAAGTTAGCCTTGAGGGGCTGGGAGAGGAACATAGCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTTTGGCAAAGTTAGCCTTGAGGGGCTGGGAGAGGAACATAGCTCC  300

seq1  CAGGAAAAGCAGCCAGCTGACACTTGATAGAGTTGAGCAAGACCTGCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAAAGCAGCCAGCTGACACTTGATAGAGTTGAGCAAGACCTGCAGC  350

seq1  AGCTGAGAGTCTAGCCTGGAGCACGGGCAGAACTCCCGAGAAAGCATGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGAGTCTAGCCTGGAGCACGGGCAGAACTCCCGAGAAAGCATGAT  400

seq1  TTTTTTTTTTAAGTTACACGCAACATTCATGTGTTTATCAGAGTTTTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTAAGTTACACGCAACATTCATGTGTTTATCAGAGTTTTTGA  450

seq1  TAAGTGATCCTAATAACAAACATCTAATGGCTAGGAGAAGAATGTTCAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGATCCTAATAACAAACATCTAATGGCTAGGAGAAGAATGTTCAGT  500

seq1  ATACATACATTCAGCAAGAAACTTTGCTCATCAGTTGAAGGACATGCACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATACATTCAGCAAGAAACTTTGCTCATCAGTTGAAGGACATGCACA  550

seq1  CACACGAGCTATGGCTTACAGACAGAAAGATCTCAGGAGCTATCAACAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACGAGCTATGGCTTACAGACAGAAAGATCTCAGGAGCTATCAACAGG  600

seq1  GCTTTGTTTACCATATTGCTTCTGGCTCAGCAACCTTCCCTTCTGAGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGTTTACCATATTGCTTCTGGCTCAGCAACCTTCCCTTCTGAGAAT  650

seq1  TTCGGTGAGATTCTCTACCACTCAGTCTCTTGAGAAAATGGTCTTTTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGGTGAGATTCTCTACCACTCAGTCTCTTGAGAAAATGGTCTTTTTTT  700

seq1  TTTTAAACATACAGCACAAAGTCCTAAAGTAAATGGGTGCCTAAAGAATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAACATACAGCACAAAGTCCTAAAGTAAATGGGTGCCTAAAGAATC  750

seq1  CTAGGAACAACCAGGAGAGCAGAGTAGAAGAAACGAAGTGAGCCAATGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAACAACCAGGAGAGCAGAGTAGAAGAAACGAAGTGAGCCAATGGG  800

seq1  AGAATGTCAGCAGGGAGGTCAGAGAGAGAAGAACCTCAGCTCACAAAATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGTCAGCAGGGAGGTCAGAGAGAGAAGAACCTCAGCTCACAAAATG  850

seq1  GCCTCTGCCCAGCAAAAGCCCCTAGCATTCACATCGAAGAAAAGAAGTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGCCCAGCAAAAGCCCCTAGCATTCACATCGAAGAAAAGAAGTCT  900

seq1  CTGGATGACTAAAATGAATT-AAGGAAGAAATCAGTGAT-AAAAATATCA  948
      |||||||||||||||||||| |||||||||||||||||| ||||||||||
seq2  CTGGATGACTAAAATGAATTAAAGGAAGAAATCAGTGATAAAAAATATCA  950

seq1  GGAGAACTGGGAAATTGAAAGCACACTGCTCTGCTAAATGGCCATGAAAC  998
       ||||||||||||||||||||||||||||||||||||  |||||||||||
seq2  -GAGAACTGGGAAATTGAAAGCACACTGCTCTGCTAATGGGCCATGAAAC  999

seq1  AAAGGGATGCTTAATGTAATTTATAATAAATGGGGCATATGTTATGCATA  1048
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGATGC-TAATGTAATTTATAATAAATGGGGCATATGTTATGCATA  1048

seq1  GTAACTATTTCCATTATTTGAGCAAACTCTTAAGTGCCAGAAAATAT  1095
      |||||||||| |||   |||||| |||||||||||| ||||||||||
seq2  GTAACTATTT-CAT--ATTGAGC-AACTCTTAAGTG-CAGAAAATAT  1090