BAC Information

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BAC

Clone NameB6Ng01-244P13
Chromosome3 (Build37)
Map Location 151,163,442 - 151,164,573
singlet/doubletsinglet
Overlap geneEltd1
Upstream geneLOC100040463, LOC623554
Downstream geneIfi44, H28, Ptgfr, LOC100040741, LOC100040597, LOC676548, Gipc2, Dnajb4, Fubp1, Nexn, C030011O14Rik, Usp33, Zzz3, Ak5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-244P13.bB6Ng01-244P13.g
ACCGA053977GA053978
length1,1891,136
definitionB6Ng01-244P13.b B6Ng01-244P13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtaccccattttttttagttgggttatttga
atttctgaagtccagcttcttgagctctttgtatatattggatattagtc
ctctattagatttaggattggtaaaaatccttttctaatctgttggtggc
ctttttgtcttattgacactgtcttttgccttacagaagctttgcaactt
tatgaggtcctatttgtcaattcttgatcttacagcacaagccattgctg
tcctgtttaggaattccccccttgtgcccatatctttgcggcttttcccc
actttctcctctataaatttcagtgtctctggtcttatgagaagatgttt
gatctacttagacttgaatttgtacaaggagataagaatggatcaatttg
cattcttctacatgatacccaccagttgtgccagcaccatttgttgaaaa
tgctgtcttttttccactggatggttttagctcccttgtcaaagatcaag
tgaccataggtgtgtggattcatttctggatcttcaattctattccattg
atctacctgtctgtagctgtaccagtaccatgcagttttttatcactatt
gctctgtagtacagcttaaggtcaggcatggtgattccaccagaggttct
tttattgttgagaatagtttttgctatcctaggttttttattattccaaa
tgaacttgcaaattgccctttctaactcagtgaagaattgagttgaaatt
ttgatggggattgcattgaatctgtagattgcttttggcaggatagccat
tttgactatattaatcctgtcaatccatgagcatgggagattatttccat
cttctgagatcttcaatttctttcttcagagacttgaagttcttatcata
cagatcttcacttctttagttagagtcaccaccaaggtatttttatatta
tttgtgactattgtgaagggtctttgtttccctaatttcttttctcagcc
atttaatccttttgtgtgagaaagccaattatttgttgagttatttatat
ccagctactacactgaagctgtttatcagtttagaggtctctgccttgaa
tttttaagtcacttataatataccctatccattcatctgcactagtgata
tttggaaccttcctcccttcccaactttatttatccttg
gaattctcagtttgatatgaattctactgacttgggtaaggcctgggagt
aaaaggtctgcttctaagcaggagcatttaccaagcccgacagtaaggag
aaggtcttgatgtgttaacttacacccaggtttttcaatgcagaaatgaa
tgttggttcatagcaccagagcaatatgaaggaagaaccatgctgacaga
aaggcggatgttcccctgtctttattgcctccccttttctagtcatgaac
tatcgatcatgaaaattagcagaaggtatagctcccttctcaaactcact
cagtgatctcctgacattaacctacaatatttacattagaaattgtggat
ataatattttaaaatttctctttggaaatgctttgccttgtgataacatg
aggccattgtaataatgaagtacaattttatactctgtgtagtttactga
aaaaaatactaaagttagggttaatgttgaagatggttatgaacagttct
gaagaagcaaagtattctatgaagaaatcattctatatgtctatattata
tgtttggctgatatcctgcttgacagtagtatattgacagaatgaatgat
catctcattggtattcattacttacccaatttaagaatgaaaaggatgaa
gttaatatgtaggcatactatgcttctttgtttctccataaaggacatgc
taatgtacctccaaagtaaattattactcaaaaatctaattctgtccgtg
tttctttcaacagttagtcgtatttacattgtggatagttaacaggtatt
tccaactttttgacattgtggcaagacattgtcatctacaaagctcacac
tgagaaacaaacatccagttgcaaaataggggaaaaaaaccctgaaggtt
ttaactaagttactattttgggtgatgccatacttatagcttttcttggt
gaatactgcctacaggctgtaggtgaaggcagaacctacagacactactg
tcctcagtgcttagggacctaagtggtggatgctctgccttgtgtagaac
aattttcatttttttttttgacttcagtaatggaataactattggaacct
cattagttcaacgggaaaaaaaagaaattccaggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_151163442_151164573
seq2: B6Ng01-244P13.g_68_1203

seq1  GAATTCTCAGTTTGATATGAATTCTACTGACTTGGGTAAGGCCTGGGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGTTTGATATGAATTCTACTGACTTGGGTAAGGCCTGGGAGT  50

seq1  AAAAGGTCTGCTTCTAAGCAGGAGCATTTACCAAGCCCGACAGTAAGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGTCTGCTTCTAAGCAGGAGCATTTACCAAGCCCGACAGTAAGGAG  100

seq1  AAGGTCTTGATGTGTTAACTTACACCCAGGTTTTTCAATGCAGAAATGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCTTGATGTGTTAACTTACACCCAGGTTTTTCAATGCAGAAATGAA  150

seq1  TGTTGGTTCATAGCACCAGAGCAATATGAAGGAAGAACCATGCTGACAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGTTCATAGCACCAGAGCAATATGAAGGAAGAACCATGCTGACAGA  200

seq1  AAGGCGGATGTTCCCCTGTCTTTATTGCCTCCCCTTTTCTAGTCATGAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCGGATGTTCCCCTGTCTTTATTGCCTCCCCTTTTCTAGTCATGAAC  250

seq1  TATCGATCATGAAAATTAGCAGAAGGTATAGCTCCCTTCTCAAACTCACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCGATCATGAAAATTAGCAGAAGGTATAGCTCCCTTCTCAAACTCACT  300

seq1  CAGTGATCTCCTGACATTAACCTACAATATTTACATTAGAAATTGTGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGATCTCCTGACATTAACCTACAATATTTACATTAGAAATTGTGGAT  350

seq1  ATAATATTTTAAAATTTCTCTTTGGAAATGCTTTGCCTTGTGATAACATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATTTTAAAATTTCTCTTTGGAAATGCTTTGCCTTGTGATAACATG  400

seq1  AGGCCATTGTAATAATGAAGTACAATTTTATACTCTGTGTAGTTTACTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCATTGTAATAATGAAGTACAATTTTATACTCTGTGTAGTTTACTGA  450

seq1  AAAAAATACTAAAGTTAGGGTTAATGTTGAAGATGGTTATGAACAGTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATACTAAAGTTAGGGTTAATGTTGAAGATGGTTATGAACAGTTCT  500

seq1  GAAGAAGCAAAGTATTCTATGAAGAAATCATTCTATATGTCTATATTATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGCAAAGTATTCTATGAAGAAATCATTCTATATGTCTATATTATA  550

seq1  TGTTTGGCTGATATCCTGCTTGACAGTAGTATATTGACAGAATGAATGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGGCTGATATCCTGCTTGACAGTAGTATATTGACAGAATGAATGAT  600

seq1  CATCTCATTGGTATTCATTACTTACCCAATTTAAGAATGAAAAGGATGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCATTGGTATTCATTACTTACCCAATTTAAGAATGAAAAGGATGAA  650

seq1  GTTAATATGTAGGCATACTATGCTTCTTTGTTTCTCCATAAAGGACATGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATATGTAGGCATACTATGCTTCTTTGTTTCTCCATAAAGGACATGC  700

seq1  TAATGTACCTCCAAAGTAAATTATTACTCAAAAATCTAATTCTGTCCGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTACCTCCAAAGTAAATTATTACTCAAAAATCTAATTCTGTCCGTG  750

seq1  TTTCTTTCAACAGTTAGTCGTATTTACATTGTGGATAGTTAACAGGTATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCAACAGTTAGTCGTATTTACATTGTGGATAGTTAACAGGTATT  800

seq1  TCCAACTTTTTGACATTGTGGCAAGACATTGTCATCTACAAAGCTCACAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACTTTTTGACATTGTGGCAAGACATTGTCATCTACAAAGCTCACAC  850

seq1  TGAGAAACAAACAATCCAGTTGCAAAAATAGGGGAAAAAAACCCTGAAGG  900
      |||||||||||| |||||||||| ||||||||||||||||||||||||||
seq2  TGAGAAACAAAC-ATCCAGTTGC-AAAATAGGGGAAAAAAACCCTGAAGG  898

seq1  TTTTAACTAAGTTACTATTTTGGGTGATGCCATACTTATAGCTTTTCTTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAACTAAGTTACTATTTTGGGTGATGCCATACTTATAGCTTTTCTTG  948

seq1  GTGAATACTGCCTACAGGCTGTAGGTG-AGGCAG-ACCTACAAGACACTA  998
      ||||||||||||||||||||||||||| |||||| |||||| ||||||||
seq2  GTGAATACTGCCTACAGGCTGTAGGTGAAGGCAGAACCTAC-AGACACTA  997

seq1  CTGTCCTCAGTGCTTTAGGAACTAAGT-GTGGATGCTCTTGCCTGTGTAG  1047
      |||||||||||||||  ||| |||||| |||||||||||  | |||||||
seq2  CTGTCCTCAGTGCTTAGGGACCTAAGTGGTGGATGCTCTGCCTTGTGTAG  1047

seq1  A--CATTTTCATTTTTTTTTTTTGAACTCAGTAAT-GATTAGACTAT--G  1092
      |   ||||||| |||||||||||||  |||||||| || || |||||  |
seq2  AACAATTTTCA-TTTTTTTTTTTGACTTCAGTAATGGAATA-ACTATTGG  1095

seq1  AA-CTCAATAG-TCAACGGAAAAAAAAAGAAATTCCGAGGTT  1132
      || |||| ||| ||||||| |||||||||||||||| |||||
seq2  AACCTCATTAGTTCAACGGGAAAAAAAAGAAATTCC-AGGTT  1136