BAC Information

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BAC

Clone NameB6Ng01-245B07
Chromosome3 (Build37)
Map Location 147,250,350 - 147,251,534
singlet/doubletsinglet
Overlap genenone
Upstream geneDnase2b, Uox, 4930503B20Rik, Gm1652, LOC670100, Prkacb, LOC100040540, Ttll7, Ppia-ps3_1528.1
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-245B07.bB6Ng01-245B07.g
ACCGA054058GA054059
length1,1901,201
definitionB6Ng01-245B07.b B6Ng01-245B07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccccaacagaacctggaagaatgaatgagccttggccttgctgta
tattcctaacagaggcaacagagacagccactaaagtagggatagggaat
atgagcaccattgtgaaatttaactagtgtaataacagtggttagagaca
gagtaaacaaattagatatgagtactttaaaaatacaggcatacacacac
atacatttatatatttatattcacatacatgccacataattataaggcac
ttaggagaaatacaacaaattataaatatcaaattaaaagaagacaaaga
acgatcgaaaatgagagccgtggaaaagactctcttctttctagcttttg
tgcattgatcagtacagatactattaataattacattaaacataaatgtt
ccaaattctccaaatattgtgtagagattttattttctggttaacaaagt
aagactcaactatatgttaccaaaatggctgtgctttaaatagaaataaa
tgtggaatttaagtaaacaggaaaagatgctatatgcagaatggatgcac
agactatgttttatccatgtaatcaagtgctacacagtggttttaaaagg
tgatgcaaagatatttcaaccacaagaatgagtgtaaaagtcctcatgat
gagctaaggaagttttacttacataaaattctacatgagagaaacgaaca
taattacagaaagtgatatgagtgaagtctgaagtaaacataaagacatc
taaggacagaaggaaaatctgggacttaatggggaggtttgaatcctagt
attgctggtggtgtagttaaagtacctctgacttattctgagtaaattat
tttaaatatagagataattctaataaaacagtatatatcatctaaagccc
gagaaaaccagtatgtgattgggtattggtcccccacttctttatacatc
ttcatatcttactacaggacacggaggagaaacaaagtagaaactaggag
gtcattactcatttctaagaaaactacatttttccctcagtttcctcctc
agaaatgacgtttttaaatagaagagtcagaagatacttttggaaagttt
gaacatccagaattctcattcacaacttgctgttgtgaagtggaagtcta
actctggtgattacagtcattcgtctacaaaatattggag
gaattctcaaaaggagaaaacaaatagctatgagattttcaagggagttt
tcgtcacctgtaggaagtggagaaattcaagtcaaaccaactttgagatt
tccacttaccccagtcagaatggcaaagatcaagaaaagagttgacaagg
aatgaaggggcgactgcgggaaaaagaacccctactcagtttgtggggct
actccagtggaaatctgctagaaaaatcctcaaaaatatgaaaatacatc
tacactatgtcccacctatgcccctctttggcatgtgcccaaaggtttag
tatcctactccacaaatatttgctcagccatgttagttactgctctagcc
agaatagctaggaaatggaaacaacccaattgtccttcaacaggtgaatg
gataatgaacatgaggcactgtagactatagaatgccatttaactctaga
gaaaactgaaatcaagaactttcaggaaaacaggcagaactagaaaagat
cattgagtggggcaacccagccccagcaagcaaaccacggctgttctctt
gtctgaagttcttagccccaaaacttcagatgtgaaaacacaacctggat
aaactgcagaaatcaaagatgttataatggtgaaagaaacatgggaaaca
ttctgagataatttactattctttcacatttaagaactatagagtagaat
gctgcatttctgtatcatgctaagttctgcagcaatgttaatatcatctt
catgagcaatgcacatggatcaaatgactttagaatggatcccatgtaaa
atatgctagatgatctaaatttcatttcaacagctgatttgtttcataga
gtgatgtaaaatgtatagtaaatgtgttttcatattcaataaccctggac
tatacaatcccagttatctccttcactgcctatttgtctgtggcatgtag
tacattctggtgtagcctgattttgtatatttaatctttattttggacta
gtaaagttgtacagaatttttataaagtattaatatatttctattttttt
tgacacttttttataagcagcttctgtgaagcaatgggtatcagggtgct
aaattgtatgtgagaattctgaaatcaatatctattaggatctatttgac
atgaacaatacttctttaaatattttaagccaaccattgaagggggtgtc
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_147250350_147251534
seq2: B6Ng01-245B07.b_49_1238

seq1  GAATTCCCCAACAGAACCTGGAAGAATGAATGAGCCTTGGCCTTGCTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCAACAGAACCTGGAAGAATGAATGAGCCTTGGCCTTGCTGTA  50

seq1  TATTCCTAACAGAGGCAACAGAGACAGCCACTAAAGTAGGGATAGGGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCTAACAGAGGCAACAGAGACAGCCACTAAAGTAGGGATAGGGAAT  100

seq1  ATGAGCACCATTGTGAAATTTAACTAGTGTAATAACAGTGGTTAGAGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCACCATTGTGAAATTTAACTAGTGTAATAACAGTGGTTAGAGACA  150

seq1  GAGTAAACAAATTAGATATGAGTACTTTAAAAATACAGGCATACACACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAACAAATTAGATATGAGTACTTTAAAAATACAGGCATACACACAC  200

seq1  ATACATTTATATATTTATATTCACATACATGCCACATAATTATAAGGCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTTATATATTTATATTCACATACATGCCACATAATTATAAGGCAC  250

seq1  TTAGGAGAAATACAACAAATTATAAATATCAAATTAAAAGAAGACAAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAGAAATACAACAAATTATAAATATCAAATTAAAAGAAGACAAAGA  300

seq1  ACGATCGAAAATGAGAGCCGTGGAAAAGACTCTCTTCTTTCTAGCTTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGATCGAAAATGAGAGCCGTGGAAAAGACTCTCTTCTTTCTAGCTTTTG  350

seq1  TGCATTGATCAGTACAGATACTATTAATAATTACATTAAACATAAATGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTGATCAGTACAGATACTATTAATAATTACATTAAACATAAATGTT  400

seq1  CCAAATTCTCCAAATATTGTGTAGAGATTTTATTTTCTGGTTAACAAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATTCTCCAAATATTGTGTAGAGATTTTATTTTCTGGTTAACAAAGT  450

seq1  AAGACTCAACTATATGTTACCAAAATGGCTGTGCTTTAAATAGAAATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTCAACTATATGTTACCAAAATGGCTGTGCTTTAAATAGAAATAAA  500

seq1  TGTGGAATTTAAGTAAACAGGAAAAGATGCTATATGCAGAATGGATGCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAATTTAAGTAAACAGGAAAAGATGCTATATGCAGAATGGATGCAC  550

seq1  AGACTATGTTTTATCCATGTAATCAAGTGCTACACAGTGGTTTTAAAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTATGTTTTATCCATGTAATCAAGTGCTACACAGTGGTTTTAAAAGG  600

seq1  TGATGCAAAGATATTTCAACCACAAGAATGAGTGTAAAAGTCCTCATGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCAAAGATATTTCAACCACAAGAATGAGTGTAAAAGTCCTCATGAT  650

seq1  GAGCTAAGGAAGTTTTACTTACATAAAATTCTACATGAGAGAAACGAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTAAGGAAGTTTTACTTACATAAAATTCTACATGAGAGAAACGAACA  700

seq1  TAATTACAGAAAGTGATATGAGTGAAGTCTGAAGTAAACATAAAGACATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTACAGAAAGTGATATGAGTGAAGTCTGAAGTAAACATAAAGACATC  750

seq1  TAAGGACAGAAGGAAAATCTGGGACTTAATGGGGAGGTTTGAATCCTAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGACAGAAGGAAAATCTGGGACTTAATGGGGAGGTTTGAATCCTAGT  800

seq1  ATTGCTGGTGGTGTAGTTAAAGTACCTCTGACTTATTCTGAGTAAATTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTGGTGGTGTAGTTAAAGTACCTCTGACTTATTCTGAGTAAATTAT  850

seq1  TTTAAATATAGAGATAATTCTAATAAAACAGTATATATCATCTAAAGCCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATATAGAGATAATTCTAATAAAACAGTATATATCATCTAAAGCCC  900

seq1  GAGAAAACCAGTATGTGATTTGGTATTGGT-CCCCACTTCTTTATACATC  949
      |||||||||||||||||||| ||||||||| |||||||||||||||||||
seq2  GAGAAAACCAGTATGTGATTGGGTATTGGTCCCCCACTTCTTTATACATC  950

seq1  TTCATATCTTACTACAGGACACGGA-GAGAAACAAAGTAGAAACTAGGAG  998
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTCATATCTTACTACAGGACACGGAGGAGAAACAAAGTAGAAACTAGGAG  1000

seq1  GTCATTACTCATTTCTAAGAAAACTACATTTTTCCCTCAGTTTCCTCCTC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTACTCATTTCTAAGAAAACTACATTTTTCCCTCAGTTTCCTCCTC  1050

seq1  AGAAAATGACGTTTTTAAATAGAAGAGTCAGAAGATAATTTTGGAAAAGT  1098
      || |||||||||||||||||||||||||||||||||| |||||||||  |
seq2  AG-AAATGACGTTTTTAAATAGAAGAGTCAGAAGATACTTTTGGAAAGTT  1099

seq1  TGAACATTCAG-ATTCTCATTCACAAACTGGTTGTGTG-AGTGG-AGTCT  1145
      ||||||| ||| ||||||||||||||  || |  |||| ||||| |||||
seq2  TGAACATCCAGAATTCTCATTCACAACTTGCTGTTGTGAAGTGGAAGTCT  1149

seq1  AACCTCT-GTGGTTACAGTTTAATCGTCTACAAA--ATTGGAG  1185
      || |||| ||| |||||| | | |||||||||||  |||||||
seq2  AA-CTCTGGTGATTACAG-TCATTCGTCTACAAAATATTGGAG  1190