BAC Information

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BAC

Clone NameB6Ng01-245M22
Chromosome3 (Build37)
Map Location 18,717,633 - 18,718,722
singlet/doubletsinglet
Overlap genenone
Upstream geneCypt12, LOC545508, Bhlhb5, Cyp7b1, LOC622921, LOC100040153
Downstream geneArmc1, Mtfr1, Pde7a, Dnajc5b, EG620290, Trim55, Crh, LOC665002
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-245M22.bB6Ng01-245M22.g
ACCGA054596GA054597
length1,1791,089
definitionB6Ng01-245M22.b B6Ng01-245M22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagggacttgaagtttttatcata
cagatctttcacttccttcgttagagtcacgccgagatattttatattat
ttgtggctatgagatggtgtgtttcctatttcttctcagctgttatcttg
tgtagagaacgcatgacttgtttgagttaattttattatccagctacttc
acgaaagctgtttatcagttaggggttcctctgatgaacttttgagttca
cttatattaactaatcctatcaactgcaactgaatttgaactcctcgttt
ccaatgtgatgcgctcatggagtatctct
gaattcttataatttctcattgactatgtaagcttttgttcccagtggtc
tgctttaaggtaacttaatgttgagtgttttcagtataattgtcatggtt
ccagaaagatgacatgagcttgtcttccttggtttctacttggttttgag
aatttcattcatcatacattttctgctattcagctgttatggaattagaa
agatttggaaatgctgggaactagaggcaggaggatacctttgagtggag
gtttgatccccctatgtctttttctttgctttattattctgggctgctcc
ctgcaagaacctttcttctcccaaaacaagcaagcttactggttcaagta
agagccagtctcttggttaatagcgacctttatttccaggagttatatat
caggtacacaaggcttccctttatttatttcactagggttacttagtaat
tacccagtcaagagaagagatggctttcatcctaattttcacaaaaattc
tatctccacctttatttgtttcaagagttatcttagaatatcaagtagct
ctagagaaaaagagagaaaatatcattaggcttctcaccatgttgatgac
acagtaatactgcacatttcttctacaccatgtatgtttcttttggcttt
agttctctagaccaacttacattctattttgcaattcttatttggcacct
ttcttaactacctagcattgcttatcttctacacctcgtctttgatattt
ttaatagcaattccaagacactagaagaagaacattaaaattttcttggg
atagatcttgtccctgtcatggctgaggttaagagataatgtacttctgt
caaaggaggtgtgggagtaacctcagatttaaggacagagtaacaagttc
ttaatggatttacctgggttcaggagtctctactaagtcagttgtgcttt
accagctaagtatatataagagaacttagtagtctttaccttttatatag
tcacaggcttgtaggaataaagagataccaaaccacacacactataattt
aaagaaagaagagacacattgtattagaacagtgtcaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_18717633_18718722
seq2: B6Ng01-245M22.g_66_1154 (reverse)

seq1  CTTGACACTG-TCTAATACAATGTTGGTCTC-TCTTTCTTT-AATTATAG  47
      |||||||||| |||||||||||||  ||||| ||||||||| ||||||||
seq2  CTTGACACTGTTCTAATACAATGT--GTCTCTTCTTTCTTTAAATTATAG  48

seq1  TTGTGTGTTGGTTTGGTATCTCTTTA-TCCTACAAGCCTGTGACTATTAT  96
       |||||| |||||||||||||||||| ||||||||||||||||||||   
seq2  -TGTGTG-TGGTTTGGTATCTCTTTATTCCTACAAGCCTGTGACTATATA  96

seq1  AAAGGTAAAGACTACTAAGTTCTCTTATATATACTTAGCTGGTAAAGCAC  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTAAAGACTACTAAGTTCTCTTATATATACTTAGCTGGTAAAGCAC  146

seq1  AACCTGACTTAGTAGAGACTCCTGAACCCAGGTAAATCCATTAAGAACTT  196
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AA-CTGACTTAGTAGAGACTCCTGAACCCAGGTAAATCCATTAAGAACTT  195

seq1  GTTACTCTGTCCTTAAATCTGAGGTTACTCCCACACCTCCTTTGACAGAA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTCTGTCCTTAAATCTGAGGTTACTCCCACACCTCCTTTGACAGAA  245

seq1  GTACATTATCTCTTAACCTCAGCCATGACAGGGACAAGATCTATCCCAAG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATTATCTCTTAACCTCAGCCATGACAGGGACAAGATCTATCCCAAG  295

seq1  AAAATTTTAATGTTCTTCTTCTAGTGTCTTGGAATTGCTATTAAAAATAT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTTTAATGTTCTTCTTCTAGTGTCTTGGAATTGCTATTAAAAATAT  345

seq1  CAAAGACGAGGTGTAGAAGATAAGCAATGCTAGGTAGTTAAGAAAGGTGC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGACGAGGTGTAGAAGATAAGCAATGCTAGGTAGTTAAGAAAGGTGC  395

seq1  CAAATAAGAATTGCAAAATAGAATGTAAGTTGGTCTAGAGAACTAAAGCC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAAGAATTGCAAAATAGAATGTAAGTTGGTCTAGAGAACTAAAGCC  445

seq1  AAAAGAAACATACATGGTGTAGAAGAAATGTGCAGTATTACTGTGTCATC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAACATACATGGTGTAGAAGAAATGTGCAGTATTACTGTGTCATC  495

seq1  AACATGGTGAGAAGCCTAATGATATTTTCTCTCTTTTTCTCTAGAGCTAC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGGTGAGAAGCCTAATGATATTTTCTCTCTTTTTCTCTAGAGCTAC  545

seq1  TTGATATTCTAAGATAACTCTTGAAACAAATAAAGGTGGAGATAGAATTT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATATTCTAAGATAACTCTTGAAACAAATAAAGGTGGAGATAGAATTT  595

seq1  TTGTGAAAATTAGGATGAAAGCCATCTCTTCTCTTGACTGGGTAATTACT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAAAATTAGGATGAAAGCCATCTCTTCTCTTGACTGGGTAATTACT  645

seq1  AAGTAACCCTAGTGAAATAAATAAAGGGAAGCCTTGTGTACCTGATATAT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAACCCTAGTGAAATAAATAAAGGGAAGCCTTGTGTACCTGATATAT  695

seq1  AACTCCTGGAAATAAAGGTCGCTATTAACCAAGAGACTGGCTCTTACTTG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCTGGAAATAAAGGTCGCTATTAACCAAGAGACTGGCTCTTACTTG  745

seq1  AACCAGTAAGCTTGCTTGTTTTGGGAGAAGAAAGGTTCTTGCAGGGAGCA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGTAAGCTTGCTTGTTTTGGGAGAAGAAAGGTTCTTGCAGGGAGCA  795

seq1  GCCCAGAATAATAAAGCAAAGAAAAAGACATAGGGGGATCAAACCTCCAC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGAATAATAAAGCAAAGAAAAAGACATAGGGGGATCAAACCTCCAC  845

seq1  TCAAAGGTATCCTCCTGCCTCTAGTTCCCAGCATTTCCAAATCTTTCTAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGGTATCCTCCTGCCTCTAGTTCCCAGCATTTCCAAATCTTTCTAA  895

seq1  TTCCATAACAGCTGAATAGCAGAAAATGTATGATGAATGAAATTCTCAAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATAACAGCTGAATAGCAGAAAATGTATGATGAATGAAATTCTCAAA  945

seq1  ACCAAGTAGAAACCAAGGAAGACAAGCTCATGTCATCTTTCTGGAACCAT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGTAGAAACCAAGGAAGACAAGCTCATGTCATCTTTCTGGAACCAT  995

seq1  GACAATTATACTGAAAACACTCAACATTAAGTTACCTTAAAGCAGACCAC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATTATACTGAAAACACTCAACATTAAGTTACCTTAAAGCAGACCAC  1045

seq1  TGGGAACAAAAGCTTACATAGTCAATGAGAAATTATAAGAATTC  1090
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAACAAAAGCTTACATAGTCAATGAGAAATTATAAGAATTC  1089