BAC Information

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BAC

Clone NameB6Ng01-246B24
Chromosome3 (Build37)
Map Location 114,709,636 - 114,710,780
singlet/doubletsinglet
Overlap geneOlfm3
Upstream geneCol11a1, LOC100043220
Downstream geneEG546808, Edg1, Dph5, LOC626061, Slc30a7, Extl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-246B24.bB6Ng01-246B24.g
ACCGA054830GA054831
length1,1391,169
definitionB6Ng01-246B24.b B6Ng01-246B24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtggaagaaaacatcagtttttacttcctcaggaaacacttca
tttcagttagggtatctcttcggaatggatacaagcagattcacttctaa
cattttaaatcaattctttgaactccctcatatcttctatctctgatatc
tgttaccttgatttttttttaaattggtaagttcaatgtccaaattgtat
taatcacattgagcacaaaagttattaatattaaaaattgcacagatagt
gagtttcttacagcaaggctttgtagaactctagccacaagaatcttgtt
tactgaacatccttggctattgatggcagtctcttgttcttcatatttat
tctactatcgctttagcactgatttgtagcattatatatttgtcgtattt
tccttggccttatcacctgaattttagggttttctgtcctaaggcttcta
tattgttttctactgatctttctatgataatctaaaaggatatttgacct
catacatattaatctgaaaggaggttagcactgaaaaatccatgagaaac
atgagccaaacacatggcttgtcagaggactgacagaagatggaccccct
tgtgcctctaactgactctttaccacagacatgtatgatacattccatta
tcattatttctactttaaacatgatgagaccaaaatgtttaatgaaagaa
agcaaaatgctgaataccttttagtcagaaatttagattatgaattttat
acttacatggagcagaaatccagagggatatatgttggctggaggtagat
ttatagaggttgagaagaacaaagtgatatatacaaagggaccacataac
ataaatgaggtacttgactctcctctgacacttctatgatagctcccccc
tcaacttatatgtttgtatgagacctttataacctgcccaagtataaatt
ggaaattattataagttaagctataaatgtatgtagttgtcactatatca
gagaaagagttttaaaagaataaagcttggtatataaaagacaaacaatg
gagagggaacggaatcaaaaatatattgagctacaatgtccaaatttcgc
ttcaatattttctcttagtgcccttactagtacctataa

gaattcaagaaggtggactccataaaatcaaataaccccattaaaaatgg
ggctcagagctgaacaaagaactctcacctgaggaataccgaatggcaga
gaagcacctgaaaaaatgttcaacatccttaatcatcagggaaatgcaaa
tcaaaacaacactgagattccacctcacaccagtcagaatggataagatc
aaaaattcaggtgacagcagatgctggcaaggatgtggagaaagaggaac
actcctccattgttggtgggattgcaagcttgtacaaccactctggaaat
cagtctggcagttcctcagaaaagtggacatagtactaccggaggatgcc
gcaatacctctcctgggcatatatccagaagatgtcccaaccggtaagaa
ggacacatgctccactatgttcataacagccttatttataatagccagaa
gctgtaaagaacccagatgcccctcaacagagaaatggaacagaaaatgt
ggtacatttacacaatggagtactactcagctattaaaaataatgaattt
atgaaattcctaggcaaatgaatggacctggaggggatcatcctgagtga
ggtaacacaatcacaaaggaactcacccaatatgtactcactgataagtg
gattttagcccagaaacttaggatacccaagatataagatacaatttgct
aaacgcatgaaactcaagaagaaggaagaccaaagtgtggacactttgcc
ccttcttagaattgggaacaaaacacccatggaaggagttacagaggcaa
agtttgggagctgtgatgaaaggatggatcatctagagacttccatatct
ggggatccatcccataatcagctttcaaacgctgacaccattgcatacat
tagcaagattttgctgaaaggaccctgatatagctgtctcttgtgagact
atgccaggcttagcaaacacagaagtggatgctcacagtcagctatggat
ggatcacagacctccaataggaggagctagaagaaagttacctaggagca
agggatctgcatcccttatagttgaactacagtatgactaacaggtaact
cggagcctctgaaccttagctgcaatgttattccaaggactggctagtcc
ggcattacctgtgcaagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_114709636_114710780
seq2: B6Ng01-246B24.b_47_1185 (reverse)

seq1  TTATAGTTACTAGTAGGGGCAAACTTAGAGAAAATATTGAAAGCGAAATT  50
      |||||| |||||||| ||||  ||| ||||||||||||| ||||||||||
seq2  TTATAGGTACTAGTAAGGGC--ACTAAGAGAAAATATTG-AAGCGAAATT  47

seq1  T-GACATTGTAGCTCATTATATTTTTTGGTTCTGTTCCCTCTCCA-TGTT  98
      | |||||||||||||| |||| |||||| ||| |||||||||||| ||||
seq2  TGGACATTGTAGCTCAATATA-TTTTTGATTCCGTTCCCTCTCCATTGTT  96

seq1  TGTCTTTTTTATATACCAAGCTTTATTCTTTTAAAACTCTTTCTCTGATA  148
      ||||  ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTC--TTTTATATACCAAGCTTTATTCTTTTAAAACTCTTTCTCTGATA  144

seq1  TAGTGAACAACTTACATACATTTTATAGCTTAACTTATAATAATTTCCAA  198
      ||||| ||||| |||||||| |||||||||||||||||||||||||||||
seq2  TAGTG-ACAAC-TACATACA-TTTATAGCTTAACTTATAATAATTTCCAA  191

seq1  TTTATACTTGGGCAGGTTATAAAGGTCTCATACAAACATATAAGTTGAGG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATACTTGGGCAGGTTATAAAGGTCTCATACAAACATATAAGTTGAGG  241

seq1  GGGGAGCTATCATAGAAGTGTCAGAGGAGAGTCAAGTACCTCATTTATGT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGCTATCATAGAAGTGTCAGAGGAGAGTCAAGTACCTCATTTATGT  291

seq1  TATGTGGTCCC-TTGTATATATCACTTTGTTCTTCTCAACCTCTATAAAT  347
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TATGTGGTCCCTTTGTATATATCACTTTGTTCTTCTCAACCTCTATAAAT  341

seq1  CTACCTCCAGCCAACATATATCCCTCTGGATTTCTGCTCCATGTAAGTAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTCCAGCCAACATATATCCCTCTGGATTTCTGCTCCATGTAAGTAT  391

seq1  AAAATTCATAATCTAAATTTCTGACTAAAAGGTATTCAGCATTTTGCTTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCATAATCTAAATTTCTGACTAAAAGGTATTCAGCATTTTGCTTT  441

seq1  CTTTCATTAAACATTTTGGTCTCATCATGTTTAAAGTAGAAATAATGATA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCATTAAACATTTTGGTCTCATCATGTTTAAAGTAGAAATAATGATA  491

seq1  ATGGAATGTATCATACATGTCTGTGGTAAAGAGTCAGTTAGAGGCACAAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAATGTATCATACATGTCTGTGGTAAAGAGTCAGTTAGAGGCACAAG  541

seq1  GGGGTCCATCTTCTGTCAGTCCTCTGACAAGCCATGTGTTTGGCTCATGT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCCATCTTCTGTCAGTCCTCTGACAAGCCATGTGTTTGGCTCATGT  591

seq1  TTCTCATGGATTTTTCAGTGCTAACCTCCTTTCAGATTAATATGTATGAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCATGGATTTTTCAGTGCTAACCTCCTTTCAGATTAATATGTATGAG  641

seq1  GTCAAATATCCTTTTAGATTATCATAGAAAGATCAGTAGAAAACAATATA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAATATCCTTTTAGATTATCATAGAAAGATCAGTAGAAAACAATATA  691

seq1  GAAGCCTTAGGACAGAAAACCCTAAAATTCAGGTGATAAGGCCAAGGAAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCTTAGGACAGAAAACCCTAAAATTCAGGTGATAAGGCCAAGGAAA  741

seq1  ATACGACAAATATATAATGCTACAAATCAGTGCTAAAGCGATAGTAGAAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACGACAAATATATAATGCTACAAATCAGTGCTAAAGCGATAGTAGAAT  791

seq1  AAATATGAAGAACAAGAGACTGCCATCAATAGCCAAGGATGTTCAGTAAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGAAGAACAAGAGACTGCCATCAATAGCCAAGGATGTTCAGTAAA  841

seq1  CAAGATTCTTGTGGCTAGAGTTCTACAAAGCCTTGCTGTAAGAAACTCAC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATTCTTGTGGCTAGAGTTCTACAAAGCCTTGCTGTAAGAAACTCAC  891

seq1  TATCTGTGCAATTTTTAATATTAATAACTTTTGTGCTCAATGTGATTAAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGTGCAATTTTTAATATTAATAACTTTTGTGCTCAATGTGATTAAT  941

seq1  ACAATTTGGACATTGAACTTACCAATTTAAAAAAAAATCAAGGTAACAGA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTTGGACATTGAACTTACCAATTTAAAAAAAAATCAAGGTAACAGA  991

seq1  TATCAGAGATAGAAGATATGAGGGAGTTCAAAGAATTGATTTAAAATGTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGAGATAGAAGATATGAGGGAGTTCAAAGAATTGATTTAAAATGTT  1041

seq1  AGAAGTGAATCTGCTTGTATCCATTCCGAAGAGATACCCTAACTGAAATG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTGAATCTGCTTGTATCCATTCCGAAGAGATACCCTAACTGAAATG  1091

seq1  AAGTGTTTCCTGAGGAAGTAAAAACTGATGTTTTCTTCCACTGAATTC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTTTCCTGAGGAAGTAAAAACTGATGTTTTCTTCCACTGAATTC  1139


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