BAC Information

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BAC

Clone NameB6Ng01-246E12
Chromosome3 (Build37)
Map Location 76,530,016 - 76,530,981
singlet/doubletsinglet
Overlap genenone
Upstream geneGolph4, Fstl5
Downstream geneLOC100041625, LOC100041635, Dnmt3a-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-246E12.bB6Ng01-246E12.g
ACCGA054935GA054936
length1,1351,168
definitionB6Ng01-246E12.b B6Ng01-246E12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatttggactgactatagaaaaatttacccccaagggtactgtt
acaatgccaaaaggagccagcaatcagtgtagcttaacagctggacatca
tacctacaggcaaagatagctaaacagagcatttttgtaaagggataacc
aaaaagacccctgctagctaatctcattctatagtaactactaaaatgtc
aaggctgctcccactgagtcctgatgttgaaagctttatggtttgcaggg
gctatatctcaccacaaaagtcctgctaaatctttatacacaaataaaca
accattaggatgctctgttggatttgagatttgccacattgtaatataat
atgctttattttaaaacagagaaaaataatgaaaatgcaaaggaaaataa
gaataaaaattgtaacaggttaaaataagcagtcaaagtactatgtcaag
gactaggaaagagataggaagctctcaaaggaggcactgcacatgtctct
gaagctgaagcaagcaagttgaataagtcaattatatagcaatatctttc
caaaaggagacatctttaacaagagatggatataaaaaggaaaatgaatt
gaaacttgaaatgaaaggttgaacaactggggaaaaataattcattagaa
gatattcgaattggcaaaagacaacactagacccttaaggagagataaca
tgcttatgaaacagagtgagcattcagtgggtcggattcctaggaagatg
gtatgtcagcaaaggtttgattacttcaatctatataaacgctaagatgc
atgtttgtacatgaagaacagaattggaaagatggtttattggataaagt
atgttcatacaaaggaaacagccagtgtttggatcctcagcacccacata
aatagtggacagatatgtcacctctcttgtaatactgtccttgacaagca
gaaaccaatgatccttagatcatgttcactagctagatttgcttaatgaa
caaacctagccagtttacagagtctctgctcataaaatagagtaatagag
tgtatgaatataaagctctggcctccacatactgcagaatgatgattcca
cacacacaatgtgcatatttaatacatgtgtagaa

gaattcattctttgacctataggtagcctgggtttcctggataccatttg
ttgaagcaaactttttatatctaatgtctgtctgcttttgacactttggt
caaaacagtggttgtagcagtgtaggtattgttggcaggagaagtctctt
ttattccatctgtatatatgtctgttattttggtttttgccagctctatc
agtgctatgaaatacatattaataactaaggctttataacataatttgag
attagacattgtggtatttccattgcttctctttcacttagaattgttgt
gtcagtttgaggccttttgttttcagtcatgaattttagaacatttttta
gcagttcttgacataatatagtgaaattttgatgcatctaatttttacat
catttcaataatataataaattttataatagcaactcatctgatcatcat
agaatgtttctcccactgctaggatcaccttcagtttctttgttggatgt
tttattttgaaagaagtctttcatctattctctagatacatttctagaca
acttttgcttcgaaattaatcttaatgaaatttttcttggtttacttgtt
agcagtaggttattggtgtatatataggaaaagtactgctttcatatgga
ttttataaccttctcagttattggtacactggttatatcagctaggatat
tgaacatagatttctgtcaacagacggatgagtagacaaatgtggtacac
atacataatggaatttaattcatcaatagggtaaaattaaatcatgaaat
tttcagaaaaatggatggaactagaaattattgtgttcaacacaataacc
aaatttggagagaaaaacactttaggcttctcctttgaatgaacgttcac
agaaagaaactggagcttcagccgaacgtttctgcaggctaataacagac
tggaacttcagtggcttattgagagatttgaaagtgggagatccatacct
aattacatttatctagctattctttagcttctaaatgcattctgctactt
ctctgtgggaactatagtcttggcacacaatttagacgtattagaagatg
acgtttggtattacctagctgaatggattggtagcacttcgacagatctg
gggtggacatttctctac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_76530016_76530981
seq2: B6Ng01-246E12.b_222_1178

seq1  CTATAGTAACTACTAAAATGTCAAGGCTGCTCCCACTGAGTCCTGATGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGTAACTACTAAAATGTCAAGGCTGCTCCCACTGAGTCCTGATGTT  50

seq1  GAAAGCTTTATGGTTTGCAGGGGCTATATCTCACCACAAAAGTCCTGCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCTTTATGGTTTGCAGGGGCTATATCTCACCACAAAAGTCCTGCTA  100

seq1  AATCTTTATACACAAATAAACAACCATTAGGATGCTCTGTTGGATTTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTATACACAAATAAACAACCATTAGGATGCTCTGTTGGATTTGAG  150

seq1  ATTTGCCACATTGTAATATAATATGCTTTATTTTAAAACAGAGAAAAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCCACATTGTAATATAATATGCTTTATTTTAAAACAGAGAAAAATA  200

seq1  ATGAAAATGCAAAGGAAAATAAGAATAAAAATTGTAACAGGTTAAAATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAATGCAAAGGAAAATAAGAATAAAAATTGTAACAGGTTAAAATAA  250

seq1  GCAGTCAAAGTACTATGTCAAGGACTAGGAAAGAGATAGGAAGCTCTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCAAAGTACTATGTCAAGGACTAGGAAAGAGATAGGAAGCTCTCAA  300

seq1  AGGAGGCACTGCACATGTCTCTGAAGCTGAAGCAAGCAAGTTGAATAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGCACTGCACATGTCTCTGAAGCTGAAGCAAGCAAGTTGAATAAGT  350

seq1  CAATTATATAGCAATATCTTTCCAAAAGGAGACATCTTTAACAAGAGATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTATATAGCAATATCTTTCCAAAAGGAGACATCTTTAACAAGAGATG  400

seq1  GATATAAAAAGGAAAATGAATTGAAACTTGAAATGAAAGGTTGAACAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAAAAAGGAAAATGAATTGAAACTTGAAATGAAAGGTTGAACAACT  450

seq1  GGGGAAAAATAATTCATTAGAAGATATTCGAATTGGCAAAAGACAACACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAAAATAATTCATTAGAAGATATTCGAATTGGCAAAAGACAACACT  500

seq1  AGACCCTTAAGGAGAGATAACATGCTTATGAAACAGAGTGAGCATTCAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCTTAAGGAGAGATAACATGCTTATGAAACAGAGTGAGCATTCAGT  550

seq1  GGGTCGGATTCCTAGGAAGATGGTATGTCAGCAAAGGTTTGATTACTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCGGATTCCTAGGAAGATGGTATGTCAGCAAAGGTTTGATTACTTCA  600

seq1  ATCTATATAAACGCTAAGATGCATGTTTGTACATGAAGAACAGAATTGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATATAAACGCTAAGATGCATGTTTGTACATGAAGAACAGAATTGGA  650

seq1  AAGATGGTTTATTGGATAAAGTATGTTCATACAAAGGAAACAGCCAGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGGTTTATTGGATAAAGTATGTTCATACAAAGGAAACAGCCAGTGT  700

seq1  TTGGATCCTCAGCACCCACATAAATAGTGGACAGATATGTCACCTCTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATCCTCAGCACCCACATAAATAGTGGACAGATATGTCACCTCTCTT  750

seq1  GTAATACTGTCCTTGACAAGCAGAAACCAATGATCCTTAGATCATGTTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATACTGTCCTTGACAAGCAGAAACCAATGATCCTTAGATCATGTTCA  800

seq1  CTAGCTAGATTTGCTTAATGAACAAACCTAGCCAGTTTAACCAGAGTCTC  850
      |||||||||||||||||||||||||||||||||||||||  |||||||||
seq2  CTAGCTAGATTTGCTTAATGAACAAACCTAGCCAGTTTA--CAGAGTCTC  848

seq1  TGCCTCAATAAAAATTAAGAGTAAATAAGGAGGTGTATG-ATATAAAGCT  899
      || ||| ||||||    ||||| ||||  || ||||||| ||||||||||
seq2  TG-CTC-ATAAAA---TAGAGT-AATA--GA-GTGTATGAATATAAAGCT  889

seq1  CTGGCCTCCACATACTTGCAAGAATGATGA-TCCACACACA-AATGTGCA  947
      ||||||||||||||| ||| |||||||||| |||||||||| ||||||||
seq2  CTGGCCTCCACATAC-TGC-AGAATGATGATTCCACACACACAATGTGCA  937

seq1  TATTT-ATACATGTGTAGAA  966
      ||||| ||||||||||||||
seq2  TATTTAATACATGTGTAGAA  957


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