BAC Information

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BAC

Clone NameB6Ng01-246L05
Chromosome3 (Build37)
Map Location 77,426,967 - 77,428,062
singlet/doubletsinglet
Overlap genenone
Upstream geneFstl5, LOC100041625, LOC100041635, Dnmt3a-ps1
Downstream geneEG626461, LOC667526, LOC626479, LOC100041691
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-246L05.bB6Ng01-246L05.g
ACCGA055243GA055244
length1,2051,101
definitionB6Ng01-246L05.b B6Ng01-246L05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaacatcagctctaaagaattgcagagggtcttgtgccagcagga
acagaaatggaggaaccctacccaaccagatgctgggatccgttcaggtc
aggaccagccccatcataatctgcatgaacctggctgagggcaccagagg
agtctctacacctcgggacctctagcaaacccaggacctcatgatcacct
gagaggatgtgggtgacagaaggaacagagcttcttgttcaggggtccca
tagggccttcatcctcagccaggtggcagagctgagacacagacccctgg
gaaccttccttgccagaggagagtcagcctacagggagagttctgacccc
aggactcaggaggtggatcagagctccagacttttggacaactgctctgt
aagaggagagcttgcctgcagagagtactgtgaccactggaactcaggtg
agagttggactcccaggagtgctgacagaggctaacagaatcacaggagg
atcaagctccagccagagacagcttgaacattaacattagagattaccag
atggtgaaaggcaaacgtaagaaacttactaacagaaaccaataacactg
ggcatcatcagtatgcccaccacagctagttctggataccccaacacacc
ctaaaagcaagacacggatttaaaatcatatctcatgatgatggtagaag
attttaagaagggcattaataactcacttaaagaaatacaggagaacatg
gctaaacaggtagaagcccttaaagaggaaacacagaaatcccataaaga
attacaggaaaacacaaccaaacaggggatggaattcaacaaaaccatcc
aagatctaaaaatagaagtagaaacaatgaagaaaacacaaagtgagaca
gaaaccctaggaaacaaatcaggaaccataggatgagagcatcagtaaca
gaataccagagatataaaaggagaatctcaggtgcagaagattccatagg
ggaacatgtacaaaacaatcaagaaaaatgcaaaatgcaaaattattcct
aattcaaaatattcagggaatccaggacaccatgagaaggacgaacccta
cggataatagggaggtagatgagattgaagattttcacctgaagggactg
ataatccttcaacaactatagaaagaaaactttccctcaccaagtgagag
aagga
gaattctctaaggatccaagttacaactccttcttccattcccatcccac
tattgtcctagtggtgactggagtgatggcatagcagtacacatggtctt
gctttctattacctgtgctctctctttctcattcttccaaaatttcagat
tgctgggccaccagaacatctaccaagatcattagcaatggtagggctca
caaatcctttgatattctataaagcacacacacacaatggagcatggaca
tgtacaaggacagacacacacagatatgttaaaaaccacacatacacata
tacacacacaaattgcacacaaaagcatccccacacataaacacacatgt
acaaacaagcacacagctatgaagtccatatacacgaacatacatacaca
ctcagacatacatacttacaagaataaacatacaaacgcacccacaagaa
cacacatgtgcatgtacctatattattttttcttttattgttgaaaatac
atttttttcagatatcatatctcaaagtgtgctatttggacagctcagca
atgcatttgctctaacatggtaagttaatatttcatagatcactcagcct
tctgtctagtaatgtctcttctcttttattgttttattacatctttactt
tactatgtttgttaaaaacaaatttataacgacaaaagaataatccttgc
tttggttacatagactcacctacattcattgtgtttaaaacaatacttta
aatttaaaatacaataaattaaatgtcttcatcatttctaatttttattt
tctacataacaacagaatgttcagcttataatgttctatttacttttcat
gagaggttattgttagaaatgcaaataacatctcctttctaactctatat
ggaagttattttgcacaggccctcttcgttcccttcctttccatcgtatt
tatcatttttgactgtagctctcaggtggtgctcaaagctcacaccattt
cttatattcaaagaaaaaaatttcatgagttgacttcttcttcttccaca
ttgttcacagctctatcgctgaatataagacatatcgtggcataagtttt
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_77426967_77428062
seq2: B6Ng01-246L05.g_68_1168

seq1  GAATTCTCTAAGGATCCAAGTTACAACTCCTTCTTCCATTCCCATCCCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAAGGATCCAAGTTACAACTCCTTCTTCCATTCCCATCCCAC  50

seq1  TATTGTCCTAGTGGTGACTGGAGTGATGGCATAGCAGTACACATGGTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTCCTAGTGGTGACTGGAGTGATGGCATAGCAGTACACATGGTCTT  100

seq1  GCTTTCTATTACCTGTGCTCTCTCTTTCTCATTCTTCCAAAATTTCAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCTATTACCTGTGCTCTCTCTTTCTCATTCTTCCAAAATTTCAGAT  150

seq1  TGCTGGGCCACCAGAACATCTACCAAGATCATTAGCAATGGTAGGGCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGCCACCAGAACATCTACCAAGATCATTAGCAATGGTAGGGCTCA  200

seq1  CAAATCCTTTGATATTCTATAAAGCACACACACACAATGGAGCATGGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCCTTTGATATTCTATAAAGCACACACACACAATGGAGCATGGACA  250

seq1  TGTACAAGGACAGACACACACAGATATGTTAAAAACCACACATACACATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAAGGACAGACACACACAGATATGTTAAAAACCACACATACACATA  300

seq1  TACACACACAAATTGCACACAAAAGCATCCCCACACATAAACACACATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACACACAAATTGCACACAAAAGCATCCCCACACATAAACACACATGT  350

seq1  ACAAACAAGCACACAGCTATGAAGTCCATATACACGAACATACATACACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAGCACACAGCTATGAAGTCCATATACACGAACATACATACACA  400

seq1  CTCAGACATACATACTTACAAGAATAAACATACAAACGCACCCACAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGACATACATACTTACAAGAATAAACATACAAACGCACCCACAAGAA  450

seq1  CACACATGTGCATGTACCTATATTATTTTTTCTTTTATTGTTGAAAATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATGTGCATGTACCTATATTATTTTTTCTTTTATTGTTGAAAATAC  500

seq1  ATTTTTTTCAGATATCATATCTCAAAGTGTGCTATTTGGACAGCTCAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTCAGATATCATATCTCAAAGTGTGCTATTTGGACAGCTCAGCA  550

seq1  ATGCATTTGCTCTAACATGGTAAGTTAATATTTCATAGATCACTCAGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATTTGCTCTAACATGGTAAGTTAATATTTCATAGATCACTCAGCCT  600

seq1  TCTGTCTAGTAATGTCTCTTCTCTTTTATTGTTTTATTACATCTTTACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTAGTAATGTCTCTTCTCTTTTATTGTTTTATTACATCTTTACTT  650

seq1  TACTATGTTTGTTAAAAACAAATTTATAACGACAAAAGAATAATCCTTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATGTTTGTTAAAAACAAATTTATAACGACAAAAGAATAATCCTTGC  700

seq1  TTTGGTTACATAGACTCACCTACATTCATTGTGTTTAAAACAATACTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTACATAGACTCACCTACATTCATTGTGTTTAAAACAATACTTTA  750

seq1  AATTTAAAATACAATAAATTAAATGTCTTCATCATTTCTAATTTTTATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAAAATACAATAAATTAAATGTCTTCATCATTTCTAATTTTTATTT  800

seq1  TCTACATAACAACAGAATGTTCAGCTTATAATGTTCTATTTACTTTTCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACATAACAACAGAATGTTCAGCTTATAATGTTCTATTTACTTTTCAT  850

seq1  GAGAGGTTATTGTTAGAAATGCAAATAACATCTCCTTTCTAACTCTATAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGTTATTGTTAGAAATGCAAATAACATCTCCTTTCTAACTCTATAT  900

seq1  GGAAGTTATTTTGCACAGG-CCTCTTCGTTCCCTTCCTTTCCATCGTATT  949
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GGAAGTTATTTTGCACAGGCCCTCTTCGTTCCCTTCCTTTCCATCGTATT  950

seq1  TATCATTTTTGACTGTAGCTCTCAGGT-GTGCTCAAAAGCTCACACCATT  998
      ||||||||||||||||||||||||||| |||||| |||||||||||||||
seq2  TATCATTTTTGACTGTAGCTCTCAGGTGGTGCTC-AAAGCTCACACCATT  999

seq1  TCTTATATCAAAAGAAAAAAATTCCATGAGTTGACTTCT--CTCTT-CAC  1045
      ||||||||  ||||||||||||| |||||||||||||||   |||| |||
seq2  TCTTATATTCAAAGAAAAAAATTTCATGAGTTGACTTCTTCTTCTTCCAC  1049

seq1  ATTGTTTCACAGCCTCTATCGCTG-ATATAGACCATATCGT-GCATAA-T  1092
      |||| ||||||| ||||||||||| |||||   |||||||| |||||| |
seq2  ATTG-TTCACAG-CTCTATCGCTGAATATAAGACATATCGTGGCATAAGT  1097

seq1  TTTA  1096
      ||||
seq2  TTTA  1101