BAC Information

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BAC

Clone NameB6Ng01-247L23
Chromosome3 (Build37)
Map Location 137,456,675 - 137,627,868
singlet/doubletdoublet
Overlap geneH2afz, Dnajb14, Map2k1ip1, Dapp1
Upstream genePpp3ca, LOC668870, LOC100039447, Emcn, EG229862, Ddit4l, LOC668874
Downstream geneEG329763, LOC100039528, Mttp, Rg9mtd2, 4930579F01Rik, Adh7, Adh1, Adh6a, LOC639769, Adh4, Adh5, Metap1, EG383925, EG668879, Eif4e, EG545570, LOC668881, LOC668882, Ppia-ps3_1437.1, Tspan5, LOC620771, Rap1gds1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-247L23.bB6Ng01-247L23.g
ACCGA056003GA056004
length1,112466
definitionB6Ng01-247L23.b B6Ng01-247L23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(137,456,675 - 137,457,777)(137,627,397 - 137,627,868)
sequence
gaattctcacaagctcaagggcagtgtgggctacagagtgagaccttgtt
tcaacacccaggcaaccaagctatgaagcgtactgtgcaggaacacagca
gtgtggcagtttgacagaatagaggactatgaaggctctaggaaactggg
gatttcctactgacagtgctctgtaagcccttgctggtctgcatttaatc
gcaatgcagttgtagctgcaaacttcaattcagacaggcattaattacat
ctctgtggcctgagtgctaagcaccagcagtggtctggtgtactatgatc
aagtaccaacagtggtctggtgtactgtgatcaagtaccagcagtggtct
ggtgtactgtgatcaagtaccagcagtggtctggtgtactgtgaccaagt
accagcagtggcctggtgtactgtgatcaagtaccagaggtcaaagcaga
gggagtgaatgggaaaggggacaaacttccatttttttctgcctaaaagg
cagggggtttttttttgtttgtttgttttgttttgtttttttgttcttat
ttttgtttttacaatacatgcatggtacataacagcactaagaataaagc
cacttttctgaacccagaaaggatgagaagggccttctaggacaacgctg
cacagcccataattcttcttgaacaaaactgaacacattcagtcactact
tgattttaatttagtctctgttgccaaggaaacatcaatatctgagtata
tccaagggaaatctttcttctttcgtgattttgaaggaattgtttattga
gggaacagcgactgagtttattcagtagacagccttagcaccagtctctg
ggtgaatctgctgggtcttcttgtgcctcggtttccttaacagataaagt
aacatgattttcttactgtagtgcaaagtaaatgattaatactggggcct
gctcccttttaacgggtgtatgggcttggacatctcactggacagggtca
ggaacctgtagattttaaggacctcttgattctgactaattcccgggaaa
agggaagcaacaaaagagttccctgtttaacagtggtcaacgtgtcacat
gttatgttcacg
ttgtggccttggctggacatgcagcaaaagctctatgctaataatgaccc
tggggggggggggctattggatgactgtggcagcactttcacaaacccag
gaagccttgctctcccctctctcctttctgttcctgacctccttgcacac
ttgggatggtagtcactacatcccagatgctgttcctcgctcctttgcgt
ctagttcagccattttggtttatttgggtttgggttttgttattaattaa
gtcttcctctccccttccctctccatctttccctccctccatttcccccc
tctcttcccccctcttctttcttcttcggttttggggtccaaactcaggt
tttcatgctttcaaagcatgtattttaccaactacactagcttcccaatc
tgggaaatacttttactctcttagctgtttctcaatcagggaggagggga
gaggagagagggagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_137456675_137457777
seq2: B6Ng01-247L23.b_44_1155

seq1  GAATTCTCACAAGCTCAAGGGCAGTGTGGGCTACAGAGTGAGACCTTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACAAGCTCAAGGGCAGTGTGGGCTACAGAGTGAGACCTTGTT  50

seq1  TCAACACCCAGGCAACCAAGCTATGAAGCGTACTGTGCAGGAACACAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACACCCAGGCAACCAAGCTATGAAGCGTACTGTGCAGGAACACAGCA  100

seq1  GTGTGGCAGTTTGACAGAATAGAGGACTATGAAGGCTCTAGGAAACTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGCAGTTTGACAGAATAGAGGACTATGAAGGCTCTAGGAAACTGGG  150

seq1  GATTTCCTACTGACAGTGCTCTGTAAGCCCTTGCTGGTCTGCATTTAATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCCTACTGACAGTGCTCTGTAAGCCCTTGCTGGTCTGCATTTAATC  200

seq1  GCAATGCAGTTGTAGCTGCAAACTTCAATTCAGACAGGCATTAATTACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGCAGTTGTAGCTGCAAACTTCAATTCAGACAGGCATTAATTACAT  250

seq1  CTCTGTGGCCTGAGTGCTAAGCACCAGCAGTGGTCTGGTGTACTATGATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGGCCTGAGTGCTAAGCACCAGCAGTGGTCTGGTGTACTATGATC  300

seq1  AAGTACCAACAGTGGTCTGGTGTACTGTGATCAAGTACCAGCAGTGGTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACCAACAGTGGTCTGGTGTACTGTGATCAAGTACCAGCAGTGGTCT  350

seq1  GGTGTACTGTGATCAAGTACCAGCAGTGGTCTGGTGTACTGTGACCAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTACTGTGATCAAGTACCAGCAGTGGTCTGGTGTACTGTGACCAAGT  400

seq1  ACCAGCAGTGGCCTGGTGTACTGTGATCAAGTACCAGAGGTCAAAGCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCAGTGGCCTGGTGTACTGTGATCAAGTACCAGAGGTCAAAGCAGA  450

seq1  GGGAGTGAATGGGAAAGGGGACAAACTTCCATTTTTTTCTGCCTAAAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTGAATGGGAAAGGGGACAAACTTCCATTTTTTTCTGCCTAAAAGG  500

seq1  CAGGGGGTTTTTTTTTGTTTGTTTGTTTTGTTTTGTTTTTTTGTTCTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGGTTTTTTTTTGTTTGTTTGTTTTGTTTTGTTTTTTTGTTCTTAT  550

seq1  TTTTGTTTTTACAATACATGCATGGTACATAACAGCACTAAGAATAAAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTTACAATACATGCATGGTACATAACAGCACTAAGAATAAAGC  600

seq1  CACTTTTCTGAACCCAGAAAGGATGAGAAGGGCCTTCTAGGACAACGCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTTCTGAACCCAGAAAGGATGAGAAGGGCCTTCTAGGACAACGCTG  650

seq1  CACAGCCCATAATTCTTCTTGAACAAAACTGAACACATTCAGTCACTACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCCCATAATTCTTCTTGAACAAAACTGAACACATTCAGTCACTACT  700

seq1  TGATTTTAATTTAGTCTCTGTTGCCAAGGAAACATCAATATCTGAGTATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTAATTTAGTCTCTGTTGCCAAGGAAACATCAATATCTGAGTATA  750

seq1  TCCAAGGGAAATCTTTCTTCTTTCGTGATTTTGAAGGAATTGTTTATTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGGGAAATCTTTCTTCTTTCGTGATTTTGAAGGAATTGTTTATTGA  800

seq1  GGGAACAGCGACTGAGTTTATTCAGTAGACAGCCTTAGCACCAGTCTCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACAGCGACTGAGTTTATTCAGTAGACAGCCTTAGCACCAGTCTCTG  850

seq1  GGTGAATCTGCTGGGTCTTCTTGTGCCTCGGTTTCCTTAACAGATAAAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAATCTGCTGGGTCTTCTTGTGCCTCGGTTTCCTTAACAGATAAAGT  900

seq1  AACATGATTTTCTTACTGTAGTGCAAAGTAAATGATTAATACT-GGGCCT  949
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AACATGATTTTCTTACTGTAGTGCAAAGTAAATGATTAATACTGGGGCCT  950

seq1  GCTCCC-TTTAACGGGTGTAT-GGCTT-GACATCTCACTGGACA-GGTCA  995
      |||||| |||||||||||||| ||||| |||||||||||||||| |||||
seq2  GCTCCCTTTTAACGGGTGTATGGGCTTGGACATCTCACTGGACAGGGTCA  1000

seq1  GGAACCTGTAGATTTTAAGGAACCTCCTGATTCTGACTAATTCCCGGG-A  1044
      |||||||||||||||||||| ||||| ||||||||||||||||||||| |
seq2  GGAACCTGTAGATTTTAAGG-ACCTCTTGATTCTGACTAATTCCCGGGAA  1049

seq1  AAGGAAGGCAACAAAAGAG-TCCCTGTTTACCAGT-GTCACGTTGTCACA  1092
      |||| | |||||||||||| |||||||||| |||| ||||   |||||||
seq2  AAGGGAAGCAACAAAAGAGTTCCCTGTTTAACAGTGGTCAACGTGTCACA  1099

seq1  TG-TATG-TCACG  1103
      || |||| |||||
seq2  TGTTATGTTCACG  1112

seq1: chr3_137627397_137627868
seq2: B6Ng01-247L23.g_67_538 (reverse)

seq1  TTCTCCCTCTCTCCTCTCCCCTCCTCCCTGATTGAGAAACAGCTAAGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCCTCTCTCCTCTCCCCTCCTCCCTGATTGAGAAACAGCTAAGAGA  50

seq1  GTAAAAGTATTTCCCAGATTGGGAAGCTAGTGTAGTTGGTAAAATACATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAGTATTTCCCAGATTGGGAAGCTAGTGTAGTTGGTAAAATACATG  100

seq1  CTTTGAAAGCATGAAAACCTGAGTTTGGACCCCAAAACCGAAGAAGAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAAAGCATGAAAACCTGAGTTTGGACCCCAAAACCGAAGAAGAAAG  150

seq1  AAGAGGGGGGAAGAGAGGGGGGAAATGGAGGGAGGGAAAGATGGAGAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGGGGGAAGAGAGGGGGGAAATGGAGGGAGGGAAAGATGGAGAGGG  200

seq1  AAGGGGAGAGGAAGACTTAATTAATAACAAAACCCAAACCCAAATAAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGAGAGGAAGACTTAATTAATAACAAAACCCAAACCCAAATAAACC  250

seq1  AAAATGGCTGAACTAGACGCAAAGGAGCGAGGAACAGCATCTGGGATGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGGCTGAACTAGACGCAAAGGAGCGAGGAACAGCATCTGGGATGTA  300

seq1  GTGACTACCATCCCAAGTGTGCAAGGAGGTCAGGAACAGAAAGGAGAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTACCATCCCAAGTGTGCAAGGAGGTCAGGAACAGAAAGGAGAGAG  350

seq1  GGGAGAGCAAGGCTTCCTGGGTTTGTGAAAGTGCTGCCACAGTCATCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGCAAGGCTTCCTGGGTTTGTGAAAGTGCTGCCACAGTCATCCAA  400

seq1  TAGCCCCCCCCCCCCAGGGTCATTATTAGCATAGAGCTTTTGCTGCATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCCCCCCCCCCAGGGTCATTATTAGCATAGAGCTTTTGCTGCATGT  450

seq1  CCAGCCAAGGCCACAAGAATTC  472
      ||||||||||||||||||||||
seq2  CCAGCCAAGGCCACAAGAATTC  472