BAC Information

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BAC

Clone NameB6Ng01-249N24
Chromosome3 (Build37)
Map Location 77,289,309 - 77,290,395
singlet/doubletsinglet
Overlap genenone
Upstream geneFstl5, LOC100041625, LOC100041635
Downstream geneDnmt3a-ps1, EG626461, LOC667526, LOC626479, LOC100041691
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-249N24.bB6Ng01-249N24.g
ACCGA057581GA057582
length1,0951,180
definitionB6Ng01-249N24.b B6Ng01-249N24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcagtttagttctatgtctcattttttgattggtttgtttggtt
tttttggtgagtaacttcctaaattctttatatgttttggatagtatcac
tctatcggatttggggttagtgaggatttattcccaatctgtaggttgca
gatttgtcttattgactatatcctttgctttccagtatcatgaggtccca
tttattagttgttgatcttagagcatgagccattgaagttctgtttagta
gatttccccctgtgccactgagttcaaggttctttcccactttctctatt
ctttcttgtcactctgttatatggcccttcttattgctataaacaattta
atttctaattcatgatatctatacatatagagttttctacagctgtatga
aatgtaggtcccacaattaagagaaatacaatatttgtctttctgagact
gatttactttactttatatggttatctctagttacattcaaattcctgca
aatggcataacttcattttccttaggtagctggaatatattgtcttgggt
tagattatatatctgatgatgtgaagctttgctggagcaaatgattccca
ttgactctttgtagccttgtccaacttctacatgttgtaagatccaactt
tgtttaggagatcagagtccaaggctggagataattacagcaattgaaat
gtcatcttaatatcaataaatattttgttaagtcagacatattaaccttg
ttacaaaacaaggaagggaaaatgtcagccaaggatttgtctgagaaaga
aacatttattatcgaagaacattcttatccttagcacactaaggtcagaa
ggaaattgtagaagtaactgttattcacctgatgtatttgttgtctcaga
agcagccttagaagagtgctgaatgaactcactctttctagttatctctg
aactctggatagttgcttcatctctgctggtctggctcaaactactctcc
aagctgactgatttcaatctggatttctctcagccttctcacggaattct
ctggctgtatctcaaacttaacctttgggtaagttcttcctaatc

gaattcttccctgaggaataccgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggacacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataattggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaatgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgcaggggcctagcaaac
acagaagtggatgctcacagtcagttaatggatggatcataggctcccaa
tggaggagctagagaaagtagccaagagctaaggggatctgcaaccctat
agtggacacattatgaactaccagtaccccgagctctgacttctagctgg
catatatatcaaaggattgctagtcggcatcactgaaaggaaagccatgg
accttgccaactttaatggccagtacaggaactccaggtccaaggggtaa
gtgggcggggcctacgtgtaaattgcttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_77289309_77290395
seq2: B6Ng01-249N24.b_47_1141

seq1  GAATTCTCAGTTTAGTTCTATGTCTCATTTTTTGATTGGTTTGTTTGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGTTTAGTTCTATGTCTCATTTTTTGATTGGTTTGTTTGGTT  50

seq1  TTTTTGGTGAGTAACTTCCTAAATTCTTTATATGTTTTGGATAGTATCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGTGAGTAACTTCCTAAATTCTTTATATGTTTTGGATAGTATCAC  100

seq1  TCTATCGGATTTGGGGTTAGTGAGGATTTATTCCCAATCTGTAGGTTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCGGATTTGGGGTTAGTGAGGATTTATTCCCAATCTGTAGGTTGCA  150

seq1  GATTTGTCTTATTGACTATATCCTTTGCTTTCCAGTATCATGAGGTCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGTCTTATTGACTATATCCTTTGCTTTCCAGTATCATGAGGTCCCA  200

seq1  TTTATTAGTTGTTGATCTTAGAGCATGAGCCATTGAAGTTCTGTTTAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTAGTTGTTGATCTTAGAGCATGAGCCATTGAAGTTCTGTTTAGTA  250

seq1  GATTTCCCCCTGTGCCACTGAGTTCAAGGTTCTTTCCCACTTTCTCTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCCCCCTGTGCCACTGAGTTCAAGGTTCTTTCCCACTTTCTCTATT  300

seq1  CTTTCTTGTCACTCTGTTATATGGCCCTTCTTATTGCTATAAACAATTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTGTCACTCTGTTATATGGCCCTTCTTATTGCTATAAACAATTTA  350

seq1  ATTTCTAATTCATGATATCTATACATATAGAGTTTTCTACAGCTGTATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTAATTCATGATATCTATACATATAGAGTTTTCTACAGCTGTATGA  400

seq1  AATGTAGGTCCCACAATTAAGAGAAATACAATATTTGTCTTTCTGAGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAGGTCCCACAATTAAGAGAAATACAATATTTGTCTTTCTGAGACT  450

seq1  GATTTACTTTACTTTATATGGTTATCTCTAGTTACATTCAAATTCCTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTACTTTACTTTATATGGTTATCTCTAGTTACATTCAAATTCCTGCA  500

seq1  AATGGCATAACTTCATTTTCCTTAGGTAGCTGGAATATATTGTCTTGGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCATAACTTCATTTTCCTTAGGTAGCTGGAATATATTGTCTTGGGT  550

seq1  TAGATTATATATCTGATGATGTGAAGCTTTGCTGGAGCAAATGATTCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTATATATCTGATGATGTGAAGCTTTGCTGGAGCAAATGATTCCCA  600

seq1  TTGACTCTTTGTAGCCTTGTCCAACTTCTACATGTTGTAAGATCCAACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTCTTTGTAGCCTTGTCCAACTTCTACATGTTGTAAGATCCAACTT  650

seq1  TGTTTAGGAGATCAGAGTCCAAGGCTGGAGATAATTACAGCAATTGAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAGGAGATCAGAGTCCAAGGCTGGAGATAATTACAGCAATTGAAAT  700

seq1  GTCATCTTAATATCAATAAATATTTTGTTAAGTCAGACATATTAACCTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCTTAATATCAATAAATATTTTGTTAAGTCAGACATATTAACCTTG  750

seq1  TTACAAAACAAGGAAGGGAAAATGTCAGCCAAGGATTTGTCTGAGAAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAAACAAGGAAGGGAAAATGTCAGCCAAGGATTTGTCTGAGAAAGA  800

seq1  AACATTTATTATCGAAGAACATTCTTATCCTTAGCACACTAAGGTCAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTATTATCGAAGAACATTCTTATCCTTAGCACACTAAGGTCAGAA  850

seq1  GGAAATTGTAGAAGTAACTGTTATTCACCTGATGTATTTGTTGTCTCAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTGTAGAAGTAACTGTTATTCACCTGATGTATTTGTTGTCTCAGA  900

seq1  AGCAGCCTTAGAAGAGTGCTGAATGAACTCACTCTTTCTAGTTATCTCTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCCTTAGAAGAGTGCTGAATGAACTCACTCTTTCTAGTTATCTCTG  950

seq1  AACTCTGGATAGTTGCTTCATCTCTGCTGGTCTGGCTCAAACTACTCTCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGGATAGTTGCTTCATCTCTGCTGGTCTGGCTCAAACTACTCTCC  1000

seq1  AAGCTGACTGA-TTCAATCTGGA-TTCTCTCAG-CTTCTCACTGAATCCT  1047
      ||||||||||| ||||||||||| ||||||||| |||||||| |||| ||
seq2  AAGCTGACTGATTTCAATCTGGATTTCTCTCAGCCTTCTCACGGAATTCT  1050

seq1  CT-GCTGTATCTCAAAC-TAAC--TTTGGTAAGTTCTT-CTAATC  1087
      || |||||||||||||| ||||  || ||||||||||| ||||||
seq2  CTGGCTGTATCTCAAACTTAACCTTTGGGTAAGTTCTTCCTAATC  1095


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