BAC Information

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BAC

Clone NameB6Ng01-249O10
Chromosome3 (Build37)
Map Location 119,598,508 - 119,737,767
singlet/doubletdoublet
Overlap genenone
Upstream geneDpyd, LOC100043275, LOC100043278, Ptbp2
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-249O10.bB6Ng01-249O10.g
ACCGA057599GA057600
length547235
definitionB6Ng01-249O10.b B6Ng01-249O10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,737,221 - 119,737,767)(119,598,508 - 119,598,742)
sequence
gaattctccttagtgcccaggtttgtgatgcctaggatgctgcccactgc
acaacaatgacagttccatgtcattaactagctctttgtctattcacctt
gtctaggacagaaatgaaggcgatggcacaggatgtctctaagtaaagat
gccgaggtgcagctgcgctcacttgacttgtctcatcgactcctttgcat
ccatttatttaatttcactttacagtatttgcaagaagactattacagca
tttgttcttttagattcacatccaaattacttatcagtgttcattttaga
tttttctaatgctctctggaaaagaaatagtcaggagatggcttctgtat
ttaagaaaaattgactcatatacaaaggaataaagtttcttcacaaatat
gagaacagttaggtaaaatatattctactatcactgtggccttaaagaaa
agctgaatcaaatggcttatggggaaaaaggcttagcataagtatgtata
tatatatatatatatatatatatatatatatatatatatatatatat

ccccacccacaaagagcatgcaggcttttgaaacgttaagtttcagtgag
tgttgtgggtgtcaggtcacaacttctgcttctttgcagacagacagttc
atctccttggaagggacaaacagccttcatagaagctgcaggacatttga
ttgtatagactaactatggcatttatttcccctgagcagtattgttattt
gttacaggctcctttggggtgggttgggggtgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_119737221_119737767
seq2: B6Ng01-249O10.b_48_594 (reverse)

seq1  ATATATATATATATATATATATATATATATATATATATATATATATATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATATATATATATATATATATATATATAT  50

seq1  ACATACTTATGCTAAGCCTTTTTCCCCATAAGCCATTTGATTCAGCTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACTTATGCTAAGCCTTTTTCCCCATAAGCCATTTGATTCAGCTTTT  100

seq1  CTTTAAGGCCACAGTGATAGTAGAATATATTTTACCTAACTGTTCTCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAGGCCACAGTGATAGTAGAATATATTTTACCTAACTGTTCTCATA  150

seq1  TTTGTGAAGAAACTTTATTCCTTTGTATATGAGTCAATTTTTCTTAAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGAAGAAACTTTATTCCTTTGTATATGAGTCAATTTTTCTTAAATA  200

seq1  CAGAAGCCATCTCCTGACTATTTCTTTTCCAGAGAGCATTAGAAAAATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGCCATCTCCTGACTATTTCTTTTCCAGAGAGCATTAGAAAAATCT  250

seq1  AAAATGAACACTGATAAGTAATTTGGATGTGAATCTAAAAGAACAAATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAACACTGATAAGTAATTTGGATGTGAATCTAAAAGAACAAATGC  300

seq1  TGTAATAGTCTTCTTGCAAATACTGTAAAGTGAAATTAAATAAATGGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATAGTCTTCTTGCAAATACTGTAAAGTGAAATTAAATAAATGGATG  350

seq1  CAAAGGAGTCGATGAGACAAGTCAAGTGAGCGCAGCTGCACCTCGGCATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGAGTCGATGAGACAAGTCAAGTGAGCGCAGCTGCACCTCGGCATC  400

seq1  TTTACTTAGAGACATCCTGTGCCATCGCCTTCATTTCTGTCCTAGACAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTAGAGACATCCTGTGCCATCGCCTTCATTTCTGTCCTAGACAAG  450

seq1  GTGAATAGACAAAGAGCTAGTTAATGACATGGAACTGTCATTGTTGTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATAGACAAAGAGCTAGTTAATGACATGGAACTGTCATTGTTGTGCA  500

seq1  GTGGGCAGCATCCTAGGCATCACAAACCTGGGCACTAAGGAGAATTC  547
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCAGCATCCTAGGCATCACAAACCTGGGCACTAAGGAGAATTC  547


seq1: chr3_119598508_119598742
seq2: B6Ng01-249O10.g_75_309

seq1  CCCCACCCACAAAGAGCATGCAGGCTTTTGAAACGTTAAGTTTCAGTGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACCCACAAAGAGCATGCAGGCTTTTGAAACGTTAAGTTTCAGTGAG  50

seq1  TGTTGTGGGTGTCAGGTCACAACTTCTGCTTCTTTGCAGACAGACAGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTGGGTGTCAGGTCACAACTTCTGCTTCTTTGCAGACAGACAGTTC  100

seq1  ATCTCCTTGGAAGGGACAAACAGCCTTCATAGAAGCTGCAGGACATTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCTTGGAAGGGACAAACAGCCTTCATAGAAGCTGCAGGACATTTGA  150

seq1  TTGTATAGACTAACTATGGCATTTATTTCCCCTGAGCAGTATTGTTATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATAGACTAACTATGGCATTTATTTCCCCTGAGCAGTATTGTTATTT  200

seq1  GTTACAGGCTCCTTTGGGGTGGGTTGGGGGTGGGG  235
      |||||||||||||||||||||||||||||||||||
seq2  GTTACAGGCTCCTTTGGGGTGGGTTGGGGGTGGGG  235


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