BAC Information

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BAC

Clone NameB6Ng01-250C11
Chromosome3 (Build37)
Map Location 46,913,883 - 46,915,023
singlet/doubletsinglet
Overlap genenone
Upstream geneEG241989, LOC545517, LOC383849
Downstream geneLOC383850, LOC100039426, LOC666202
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250C11.bB6Ng01-250C11.g
ACCGA057779GA057780
length1,2331,141
definitionB6Ng01-250C11.b B6Ng01-250C11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttctttagctctgtaccccattttaatggggttatttgatttt
ttggagtctaccttcttaagttctttatatatattggatattagtcccct
atctgaattaggataggtaaagatcctttctcaatctgtcggtggccttt
ttgtgttattgacagtgtcttttgccattttatgaggtcccatttgttaa
tacttgatcttacagtacaagccattgctgttctgtttaggaatttttcc
cctgtgtccttatattcgaggcttttcttccccactttctcctctataaa
tttcattgtctctggttttatctggaggtctttgacccacttagacttga
gctttgtacaaagaaataagaatggatcaatttcccattcttctacatga
taactgccagttgtgccagcaccatttgttgaaaatgctgtcatttttcc
actggatggttttagatcccttatcaaagatcaagtgagcacagttttgt
ggattcatttctgggtcttcaattctattccattgatctacctgtctgtc
attgtaccagtaccatgcagtttttatcacaattgctctgtagtacagct
tgaggtcaggcagggtgattccagcagagattcttttactgttgaaaata
gttttcgctgtcctaggttttctgttatttcagatgaattttcaaattgc
cctttctaagtcagtgaagaattgagttggaattttgatggggattgcat
tgaatctgtagattgctttaggcaggatagctattttgactatataaatc
ctgccaatccatgagaataggagatctttccatcttctgagatcttcttc
aatttctttcttcagagacatgagattcttatcatacagaactttcactt
ccttagttagagtcacaccaagttattttatattatttgtaattattgtg
aaaggtattgtttccctaatttctttctcagcctgtttatcctttgtgca
agagaaaggccattgatttgtttatgtaattttgttattcagctactgca
cctgaagctgttattcagttagaaggtctctggtgaatttttagggtcac
tatatattaactaatcatatcattggcataatggtatttgactctcttca
tgattcctgaatctcttatgtgaatggcttcgctgaactagaacaatgag
caagtatgcgtctgaactccaataggtacttcc

gaattcagcctctgccataagagagaaaagtcctgaaatgtgaaagatta
gatcattcgaggacaatggactgttttgtctgtggacacggcaatctaca
gagatgtagttctgttcagctgaatttcacatctaatgctgccatctctc
tataaagacatataaatagttgtaaaggagttattctttcaaatgactgg
gcatataaaagtagatatgttctattaataaaataaaagagtaatttgct
gtcttatgcccagaactactctgattagccttatgaagatcttaagcaag
tcttgtattatttctgtaggtgagaagacattatgaatagctgtggaatt
tgtggaaatataataagtgtccctatgttttttgctcagaattcatgact
aaaatgcccttccttgatgatgtagcccttacaacacataattaggtttc
ttttttcaagggaattgaatatgagtattcctgttagcagcaacttgtaa
tgaaatattgatccaatagatgaaaatggcatctcatacttttgtctagc
tccatttaataattgggcttattgataagaataatggaaattttcatcac
tgttttgacatttagaataatattgtatataagatggctctagagcacct
aaatattctcaactttgatatatttcaacaacatgatcacatggacttct
aggatatatatgagttggcggttacagaaaagaaactcaatcatgtaaag
ttacagctagaaacttaattatatgttttctttacaaacaaatccctaaa
ctaaaagtctttgttacattccatagtttataggtattcttaacagacag
taaaatccacaaagttattatgagcaacttctttaaagacatgtgatcac
atacattaatttcagcaagataatcataagataccagatgatgtcagaca
ttttaaaggtagaataacaaaacactacagaatatttattttcacatttc
ctcaaggtcaatgatcacttctcacagtataaaaaataatttcagatcac
tattatggtatctatggtaatatactccctgggctttttgtataaaaaca
ttttaaggtggtatcttaggttatacttattcaatatatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_46913883_46915023
seq2: B6Ng01-250C11.g_68_1208

seq1  GAATTCAGCCTCTGCCATAAGAGAGAAAAGTCCTGAAATGTGAAAGATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCCTCTGCCATAAGAGAGAAAAGTCCTGAAATGTGAAAGATTA  50

seq1  GATCATTCGAGGACAATGGACTGTTTTGTCTGTGGACACGGCAATCTACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATTCGAGGACAATGGACTGTTTTGTCTGTGGACACGGCAATCTACA  100

seq1  GAGATGTAGTTCTGTTCAGCTGAATTTCACATCTAATGCTGCCATCTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGTAGTTCTGTTCAGCTGAATTTCACATCTAATGCTGCCATCTCTC  150

seq1  TATAAAGACATATAAATAGTTGTAAAGGAGTTATTCTTTCAAATGACTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGACATATAAATAGTTGTAAAGGAGTTATTCTTTCAAATGACTGG  200

seq1  GCATATAAAAGTAGATATGTTCTATTAATAAAATAAAAGAGTAATTTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATAAAAGTAGATATGTTCTATTAATAAAATAAAAGAGTAATTTGCT  250

seq1  GTCTTATGCCCAGAACTACTCTGATTAGCCTTATGAAGATCTTAAGCAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTATGCCCAGAACTACTCTGATTAGCCTTATGAAGATCTTAAGCAAG  300

seq1  TCTTGTATTATTTCTGTAGGTGAGAAGACATTATGAATAGCTGTGGAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTATTATTTCTGTAGGTGAGAAGACATTATGAATAGCTGTGGAATT  350

seq1  TGTGGAAATATAATAAGTGTCCCTATGTTTTTTGCTCAGAATTCATGACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAAATATAATAAGTGTCCCTATGTTTTTTGCTCAGAATTCATGACT  400

seq1  AAAATGCCCTTCCTTGATGATGTAGCCCTTACAACACATAATTAGGTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGCCCTTCCTTGATGATGTAGCCCTTACAACACATAATTAGGTTTC  450

seq1  TTTTTTCAAGGGAATTGAATATGAGTATTCCTGTTAGCAGCAACTTGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCAAGGGAATTGAATATGAGTATTCCTGTTAGCAGCAACTTGTAA  500

seq1  TGAAATATTGATCCAATAGATGAAAATGGCATCTCATACTTTTGTCTAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATATTGATCCAATAGATGAAAATGGCATCTCATACTTTTGTCTAGC  550

seq1  TCCATTTAATAATTGGGCTTATTGATAAGAATAATGGAAATTTTCATCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTTAATAATTGGGCTTATTGATAAGAATAATGGAAATTTTCATCAC  600

seq1  TGTTTTGACATTTAGAATAATATTGTATATAAGATGGCTCTAGAGCACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGACATTTAGAATAATATTGTATATAAGATGGCTCTAGAGCACCT  650

seq1  AAATATTCTCAACTTTGATATATTTCAACAACATGATCACATGGACTTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTCTCAACTTTGATATATTTCAACAACATGATCACATGGACTTCT  700

seq1  AGGATATATATGAGTTGGCGGTTACAGAAAAGAAACTCAATCATGTAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATATATATGAGTTGGCGGTTACAGAAAAGAAACTCAATCATGTAAAG  750

seq1  TTACAGCTAGAAACTTAATTATATGTTTTCTTTACAAACAAATCCCTAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGCTAGAAACTTAATTATATGTTTTCTTTACAAACAAATCCCTAAA  800

seq1  CTAAAAGTCTTTGTTACATTCCATAGTTTATAGGTATTCTTAACAGACAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAGTCTTTGTTACATTCCATAGTTTATAGGTATTCTTAACAGACAG  850

seq1  TAAAATCCACAAAGTTATTATGAGCAACTTCTTTAAAGACATGTGATCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCCACAAAGTTATTATGAGCAACTTCTTTAAAGACATGTGATCAC  900

seq1  ATACATTAATTTCAGCAAGATAATCATAAGATACCAGATGATGTCAGACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTAATTTCAGCAAGATAATCATAAGATACCAGATGATGTCAGACA  950

seq1  TTTTAAAGGTAGAATAACAAAACACTACAGAATATTTATTTTCACATTTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAGGTAGAATAACAAAACACTACAGAATATTTATTTTCACATTTC  1000

seq1  CTCAAAGGTCAATGATCACTTCTCCACAGTAT-AAAAATAATTTCAGATC  1049
      ||| ||||||||||||||||||| |||||||| |||||||||||||||||
seq2  CTC-AAGGTCAATGATCACTTCT-CACAGTATAAAAAATAATTTCAGATC  1048

seq1  AACTATTTATGTATCTATGTTATATA-ACTCCCTGG--CTTTTGTATAAA  1096
       ||||||   ||||||||| || ||| |||||||||   |||||||||||
seq2  -ACTATTATGGTATCTATGGTA-ATATACTCCCTGGGCTTTTTGTATAAA  1096

seq1  AACATTTTAA-GTGGTATCTTAAGTTATAACTTATTAAATATATGC  1141
      |||||||||| ||||||||||| ||||| ||||||| |||||||||
seq2  AACATTTTAAGGTGGTATCTTAGGTTAT-ACTTATTCAATATATGC  1141


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