BAC Information

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BAC

Clone NameB6Ng01-251A20
Chromosome3 (Build37)
Map Location 20,841,741 - 20,842,565
singlet/doubletsinglet
Overlap genenone
Upstream geneCp, Hps3, Hltf, Gyg, Cpa3, EG664965, LOC100040283, Cpb1, Agtr1b
Downstream geneEG665094, LOC100040325, 7530428D23Rik, LOC100039465
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251A20.bB6Ng01-251A20.g
ACCGA058423GA058424
length1,0891,035
definitionB6Ng01-251A20.b B6Ng01-251A20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccatttctctgtagaaccaccacgctgatttccattatgactgt
gcatgttttcactgccacaaacaatggaggagtgtttagttcattttact
acatatcctcaccagctgtcatttgtcttactgatcttgtcaattttgtc
tgatataaaatgaaatctcaaaggagttttgatttgaatttccctgatgt
ctaaaggtgttaaacattactttgtttcttgacatttgaattctctctgt
tgatatttctctgtttagatttgtacctcatttataaaattatgttgttt
tcctgaagttctgggtttttctttagttctttatgtattttggattatga
cccttctaatggatgtttaattgaaaaaaaaaaaagttgcccattctgta
tattgtcactttgtccaaatgatggtgtcctttgccatgcagaaactttt
cagattcgtaaagtgacacttagtaattgttcttagtgtctgtgttatca
gtcttctgaaaacaaaatcttttcttgtgccaatgggttcaagactcttc
accactgtcttttctgtcagggttagtgaatctggccactttactcattt
ggagttgagctttgtgtagggtaataagtgtggatctatttgcattctct
tgcattcagatatccagtttgaccagcaccattttttaagatgctggttt
tcttccagtatgtatttctggtgtcctgatgagatatcagatatccatag
gtataaggacttaggaaatagcatcccaacaaggctaaataaacaatggg
gaaaactttaggaggagtggagctagagttgtatgtgacaaatggttgtg
attgggacatcttgcatcaaagagaaacgtttttcttagttgagaaagtg
tgcttacaccttttaaggttcagtggagataacacaaaagcacaggtttg
atgaaaaggaaaggtttgcaaatactgtgattaaacaaggcaaggttaac
acatctttaaggcatgtcaagttagatagacttactctgtttagccataa
gaataagtaatgatctttagcagggagtactttttagga
gaattcttcccccacctgatagtcaatcaactgatgtgccaaaaaacggg
tcatcgggccctcggtcccagggccctcaaagatatgggaaccggtttgt
caggacccaggaagcagtcagagaggcgacccaggaagacccacaagggt
ggacctgcgtgccgcctccgacttcctattaatgcctcaaatgagtattc
agccggtgccagtggagcctataccatccttgcccccgggaaccatgggc
cttattctcggccggggttcactcaccttgcagggcttagtagtccaccc
tggagttatggattgtcaacattcccctgaaatacaggtcctgtgctcaa
gccctaaaggcgttttttctattagtaaaggagataggatagctcagctg
ctgctcctccctgataataccagagagaaatctgcaggacctgagataaa
gaaaatgggctcctcaggaaatgattctgcctatttggttgtatctttaa
atgatagacctaagctccgccttaagatcaacggaaaagagtttgaaggc
atccttgataccggagcagataaaagtataatttctacacattggtggcc
caaagcgtggcccaccacagagtcatctcattcattacagggcctaggat
atcaatcatgtcccactataagctccgttgccttgacgtgggaatcctct
gaaggacagcaagggaaattcataccttatgtgctcccactcccggttaa
cctctggggaagggatattatgcagcatttgggccttattttgtccaatg
aaaacgccccatcgggagggtattcagctaaagcaaaaaatatcatggca
aagatgggttataagaaaggaaaagggttaggatgtcaagagcaagggaa
ggacagagctcaatatcaccttatatctaatgattgggccagttttagtt
accttcctttcagacaatagataacattatcgaacattcactttacagtt
gttcaaaatcatctgttgtgttccccaattactag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_20841741_20842565
seq2: B6Ng01-251A20.b_310_1133

seq1  TAGATTTGTACCTCATTTATAAAATTATGTTGTTTTCCTGAAGTTCTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTGTACCTCATTTATAAAATTATGTTGTTTTCCTGAAGTTCTGGG  50

seq1  TTTTTCTTTAGTTCTTTATGTATTTTGGATTATGACCCTTCTAATGGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTTTAGTTCTTTATGTATTTTGGATTATGACCCTTCTAATGGATG  100

seq1  TTTAATTGAAAAAAAAAAAAGTTGCCCATTCTGTATATTGTCACTTTGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTGAAAAAAAAAAAAGTTGCCCATTCTGTATATTGTCACTTTGTC  150

seq1  CAAATGATGGTGTCCTTTGCCATGCAGAAACTTTTCAGATTCGTAAAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGATGGTGTCCTTTGCCATGCAGAAACTTTTCAGATTCGTAAAGTG  200

seq1  ACACTTAGTAATTGTTCTTAGTGTCTGTGTTATCAGTCTTCTGAAAACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTAGTAATTGTTCTTAGTGTCTGTGTTATCAGTCTTCTGAAAACAA  250

seq1  AATCTTTTCTTGTGCCAATGGGTTCAAGACTCTTCACCACTGTCTTTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTTCTTGTGCCAATGGGTTCAAGACTCTTCACCACTGTCTTTTCT  300

seq1  GTCAGGGTTAGTGAATCTGGCCACTTTACTCATTTGGAGTTGAGCTTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGGTTAGTGAATCTGGCCACTTTACTCATTTGGAGTTGAGCTTTGT  350

seq1  GTAGGGTAATAAGTGTGGATCTATTTGCATTCTCTTGCATTCAGATATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGGTAATAAGTGTGGATCTATTTGCATTCTCTTGCATTCAGATATCC  400

seq1  AGTTTGACCAGCACCATTTTTTAAGATGCTGGTTTTCTTCCAGTATGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGACCAGCACCATTTTTTAAGATGCTGGTTTTCTTCCAGTATGTAT  450

seq1  TTCTGGTGTCCTGATGAGATATCAGATATCCATAGGTATAAGGACTTAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGTGTCCTGATGAGATATCAGATATCCATAGGTATAAGGACTTAGG  500

seq1  AAATAGCATCCCAACAAGGCTAAATAAACAATGGGGAAAACTTTAGGAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGCATCCCAACAAGGCTAAATAAACAATGGGGAAAACTTTAGGAGG  550

seq1  AGTGGAGCTAGAGTTGTATGTGACAAATGGTTGTGATTGGGACATCTTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAGCTAGAGTTGTATGTGACAAATGGTTGTGATTGGGACATCTTGC  600

seq1  ATCAAAGAGAAACG-TTTTCTTAGTTGAGAAAGTGTGCTTACACC-TTTA  648
      |||||||||||||| |||||||||||||||||||||||||||||| ||||
seq2  ATCAAAGAGAAACGTTTTTCTTAGTTGAGAAAGTGTGCTTACACCTTTTA  650

seq1  AGGTTCAGTGGAGATAACACAAAAGCACAGGTTTGATGAAAAGAAAAGGT  698
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AGGTTCAGTGGAGATAACACAAAAGCACAGGTTTGATGAAAAGGAAAGGT  700

seq1  TTGCAAATACTGTGATTAAAC-AGGC-AGGTTAACACATCTTTAAGGCAT  746
      ||||||||||||||||||||| |||| |||||||||||||||||||||||
seq2  TTGCAAATACTGTGATTAAACAAGGCAAGGTTAACACATCTTTAAGGCAT  750

seq1  GTCAAGTTAGGATAGACTTTACCCTG-TTAGCCATAAGAAATAAGTAATG  795
      ||||||||| ||||||| |||| ||| ||||||||||| |||||||||||
seq2  GTCAAGTTA-GATAGAC-TTACTCTGTTTAGCCATAAG-AATAAGTAATG  797

seq1  ATCTTTTAGCAAGGGAGTACTTTTTTAGGA  825
      ||| |||||| ||||||||| |||||||||
seq2  ATC-TTTAGC-AGGGAGTAC-TTTTTAGGA  824