BAC Information

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BAC

Clone NameB6Ng01-251E06
Chromosome3 (Build37)
Map Location 119,431,034 - 119,432,201
singlet/doubletsinglet
Overlap genePtbp2
Upstream geneDpyd, LOC100043275, LOC100043278
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251E06.bB6Ng01-251E06.g
ACCGA058575GA058576
length1,2111,168
definitionB6Ng01-251E06.b B6Ng01-251E06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgtgagaaatacatacatacatacatacatacatacatacata
catatgtccatacttctaatacacaatggcacagaataaacaattctccc
ttccaaaataaaggaaaggtaaggtcaaagcaaggcaaaaataaattaag
gcaaataccgagcccggcagctttgtgtctggagttgaaacttaatgatg
ccatcatctggagtccagtggtcacggatacctctgcccttgcagtactg
ctgtctgcagcagttggggctatttggggttatctatactcagtgtcctc
atcttttcttgctgagcattgaaagttctggcttctgggctctccactgc
aatttgggcttcacatttaacccttcacttgaagcctactcgggagctcc
gtgcagagaatttgattctactacacattgcttggactcactagctttct
caacatacaatacaagactgcaagacccccttcttagagtaccttccata
cctacaaactgattgctgtattgatgacattaagttctgctacaatttca
aggtgtatcccaaactttggaggacaacttctgtgtgcactcataactga
aactgagaaactcttccctaggtcgttgtttgccagtaaaggattccatc
gatcccacttcaagctccaaatgaatgtatacggtttgtttttattattg
gttattttatttattcatatctcagatgttttccctcttcccattttccc
tccatgaaccccctatcccatcctcctgccccttgcttctatgtgggtgc
tcccctacccacctactccctgcttctcctcccacacctgatcctccaca
agaccaagggcctcccctctgtttgatgtcagatgaggccattctctgtt
acatatgcagctggagccatgggtccctccatgtgtactctttggttggt
ggtttactccctggagctctgggggatctggttggttgatatttttttcc
tatgggttgcaaaccccttcaggctcttcagtcccttccctaactcctca
tggatccgatcccttgtgctcagtctgaatgttgctgccaaacatctgca
atctgtatgatcaggctcttgcagaacctctcagggaacagctataccat
gctctttgtcagcagtattcttggcaccagtcaataactgctgctcgcga
cacatactcgt
gaattcattgcttctgttttgaaacttttcttgggtgaaatttgagcagt
ctttttattaaaaggtaatatttattaaaattcagcttagacttttaaac
tgtctcttgaatctataacaatttacatttgccttttaattcacaattat
tttaggttcatttaaataattctcttaatgacattttatgacctaaagct
ttatctaaatatttaacatcaaatttgctcccttataaaacacagatgta
aaaacctggagtatttcttttaaacaattatgttttaatatttagtattt
tgaataaattctctacttattaatttttttgataattttgttagagtatt
gaattgttatcatgggaaaaaaatgtatcttaaaagaagaaaaagagttt
tcccaaaagtgaagtaagtactaagtatacttagatagaaatcttgttaa
tagtttaatgatttattattatttttttaaataaaacaggaaaacaagta
agtgattaggactgtcactagtctgtaattttaactacataccttgatac
tcctttttaaatgtcattacagcattctttctttgaaatgaattgtctgt
taaataccttagtactttttaatattaagggtactatttataaaatatta
ccaaagattgtagggaatctcttaatgtctgatagggagctccacagatc
aaaatatgacattaatactaaaataggttttgagttttgattcttgattt
ttctcattggtatgcataggagctttattctgtgcatcaggcttaaggct
aatagagtacatgattatatgttctcttggttttaatttggttgtaaaag
tcagtaggtataactcagataaaagcttgttctcctcagtcattttaagt
gtaaaagggagacatgagagcaaaaggtttcaattttgttttagcctagt
tacaaagctcaaggagctcggatcctaaacaagagatgttaagagttaga
ggttacagagaaaagaacaagagatctgaaaattcctgagatgtttttat
tttttgttgttagttatggctggatttcagtaaagtttttttgactactg
ggctgagagcatctcttactgttaattgaaaatagccattaatgaaggtt
gaatttctcatttgttgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_119431034_119432201
seq2: B6Ng01-251E06.g_67_1233 (reverse)

seq1  CAACAAATG---AAATCAA-CTTCATTTATGGGCTATTTTCAATTTTAAC  46
      |||||||||   || |||| ||||||| || ||||||||||||  |||||
seq2  CAACAAATGAGAAATTCAACCTTCATTAAT-GGCTATTTTCAA--TTAAC  47

seq1  AGGTAAGGAGATGCTCTCAAGGCCAGTAACTCAAAAAACTTTTACTGAAA  96
      | |||| ||||||||||| || ||||| | ||||||||  ||||||| ||
seq2  A-GTAA-GAGATGCTCTC-AGCCCAGT-AGTCAAAAAAACTTTACTG-AA  92

seq1  ACCCAGCCATAACTTAACAC-AAAAATAAAACAATCTCAGGAATTTTCAG  145
      | |||||||||||| |  || ||||||||||  |||||||||||||||||
seq2  ATCCAGCCATAACTAACAACAAAAAATAAAAACATCTCAGGAATTTTCAG  142

seq1  ATCTCTTG-TCTTTTCTCTGT-ACCTCTAACTCTTAACATCTCTTGTTTA  193
      |||||||| |||||||||||| ||||||||||||||||||||||||||||
seq2  ATCTCTTGTTCTTTTCTCTGTAACCTCTAACTCTTAACATCTCTTGTTTA  192

seq1  GGATCCGAGCTCCTTGAGCTTTGTAACTAGGCTAAAACAAAATTGAAACC  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCCGAGCTCCTTGAGCTTTGTAACTAGGCTAAAACAAAATTGAAACC  242

seq1  TTTTGCTCTCATGTCTCCCTTTTACACTTAAAATGACTGAGGAGAACAAG  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTCTCATGTCTCCCTTTTACACTTAAAATGACTGAGGAGAACAAG  292

seq1  CTTTTATCTGAGTTATACCTACTGACTTTTACAACCAAATTAAAACCAAG  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTATCTGAGTTATACCTACTGACTTTTACAACCAAATTAAAACCAAG  342

seq1  AGAACATATAATCATGTACTCTATTAGCCTTAAGCCTGATGCACAGAATA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACATATAATCATGTACTCTATTAGCCTTAAGCCTGATGCACAGAATA  392

seq1  AAGCTCCTATGCATACCAATGAGAAAAATCAAGAATCAAAACTCAAAACC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCCTATGCATACCAATGAGAAAAATCAAGAATCAAAACTCAAAACC  442

seq1  TATTTTAGTATTAATGTCATATTTTGATCTGTGGAGCTCCCTATCAGACA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAGTATTAATGTCATATTTTGATCTGTGGAGCTCCCTATCAGACA  492

seq1  TTAAGAGATTCCCTACAATCTTTGGTAATATTTTATAAATAGTACCCTTA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAGATTCCCTACAATCTTTGGTAATATTTTATAAATAGTACCCTTA  542

seq1  ATATTAAAAAGTACTAAGGTATTTAACAGACAATTCATTTCAAAGAAAGA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAAAAAGTACTAAGGTATTTAACAGACAATTCATTTCAAAGAAAGA  592

seq1  ATGCTGTAATGACATTTAAAAAGGAGTATCAAGGTATGTAGTTAAAATTA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGTAATGACATTTAAAAAGGAGTATCAAGGTATGTAGTTAAAATTA  642

seq1  CAGACTAGTGACAGTCCTAATCACTTACTTGTTTTCCTGTTTTATTTAAA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTAGTGACAGTCCTAATCACTTACTTGTTTTCCTGTTTTATTTAAA  692

seq1  AAAATAATAATAAATCATTAAACTATTAACAAGATTTCTATCTAAGTATA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAATAATAAATCATTAAACTATTAACAAGATTTCTATCTAAGTATA  742

seq1  CTTAGTACTTACTTCACTTTTGGGAAAACTCTTTTTCTTCTTTTAAGATA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTACTTACTTCACTTTTGGGAAAACTCTTTTTCTTCTTTTAAGATA  792

seq1  CATTTTTTTCCCATGATAACAATTCAATACTCTAACAAAATTATCAAAAA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTTTCCCATGATAACAATTCAATACTCTAACAAAATTATCAAAAA  842

seq1  AATTAATAAGTAGAGAATTTATTCAAAATACTAAATATTAAAACATAATT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATAAGTAGAGAATTTATTCAAAATACTAAATATTAAAACATAATT  892

seq1  GTTTAAAAGAAATACTCCAGGTTTTTACATCTGTGTTTTATAAGGGAGCA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAAAGAAATACTCCAGGTTTTTACATCTGTGTTTTATAAGGGAGCA  942

seq1  AATTTGATGTTAAATATTTAGATAAAGCTTTAGGTCATAAAATGTCATTA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGATGTTAAATATTTAGATAAAGCTTTAGGTCATAAAATGTCATTA  992

seq1  AGAGAATTATTTAAATGAACCTAAAATAATTGTGAATTAAAAGGCAAATG  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATTATTTAAATGAACCTAAAATAATTGTGAATTAAAAGGCAAATG  1042

seq1  TAAATTGTTATAGATTCAAGAGACAGTTTAAAAGTCTAAGCTGAATTTTA  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTGTTATAGATTCAAGAGACAGTTTAAAAGTCTAAGCTGAATTTTA  1092

seq1  ATAAATATTACCTTTTAATAAAAAGACTGCTCAAATTTCACCCAAGAAAA  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATATTACCTTTTAATAAAAAGACTGCTCAAATTTCACCCAAGAAAA  1142

seq1  GTTTCAAAACAGAAGCAATGAATTC  1168
      |||||||||||||||||||||||||
seq2  GTTTCAAAACAGAAGCAATGAATTC  1167