MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-253K02
Chromosome	3 (Build37)
Map Location	56,182,116 - 56,182,685
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Dclk1, Mab21l1, 4933417G07Rik
Downstream gene	LOC100040139, LOC666585, Tm4sf1, LOC383862
Link	Open Mouse BAC browser

Click to get alignment info.

name	Dclk1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13175 MGI:1330861
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mab21l1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17116 MGI:1333773
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4933417G07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71182 MGI:1918432
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 5 Proteins

name	LOC100040139 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040139
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC666585 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666585
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 ESTs, 8 Proteins pseudo : _no_value

name	Tm4sf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17112 MGI:104678
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC383862 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383862
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 13 Proteins pseudo : _no_value

name	Dclk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130532 GeneID:13175 MGI:1330861
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : doublecortin-like kinase 1 transcript_id : NM_019978.2

name	Mab21l1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560806 GeneID:17116 MGI:1333773
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mab-21-like 1 (C. elegans) transcript_id : NM_010750.2

name	Tm4sf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:88900519 GeneID:17112 MGI:104678
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane 4 superfamily member 1 transcript_id : NM_008536.3

name	Dclk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9910164 CCDS:CCDS17359.1 GeneID:13175 MGI:1330861
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007409 - axonogenesis [Evidence IMP]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0030900 - forebrain development [Evidence IMP]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0007399 - nervous system development [Evidence IEA]; GO:0001764 - neuron migration [Evidence IGI]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : doublecortin-like kinase; CLICK-I beta; doublecortin and calcium/calmodulin-dependent protein kinase-like 1 product : double cortin and calcium/calmodulin-dependent protein kinase-like 1 protein_id : NP_064362.1

name	Mab21l1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754598 CCDS:CCDS17360.1 GeneID:17116 MGI:1333773
definition	GO_process : GO:0001747 - eye development (sensu Mammalia) [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence IMP] codon_start : 1 product : mab-21-like 1 protein_id : NP_034880.1

name	Tm4sf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678762 GeneID:17112 MGI:104678
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 note : membrane component, surface marker 1; L6 antigen; 12A8 target antigen product : transmembrane 4 superfamily member 1 protein_id : NP_032562.1

name	LOC100040139 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040139
definition	number : 1 pseudo : _no_value

name	4933417G07Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94369549 GeneID:71182 MGI:1918432
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 5 Proteins product : RIKEN cDNA 4933417G07 gene transcript_id : XR_002339.1

name	LOC666585 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149251157 GeneID:666585
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 ESTs, 8 Proteins product : hypothetical LOC666585 pseudo : _no_value transcript_id : XR_031577.1

name	LOC383862 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149251158 GeneID:383862
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 13 Proteins product : similar to fructose-1,6-bisphosphate aldolase A pseudo : _no_value transcript_id : XR_031586.1

clone name	MSMg01-343H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-204D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-214A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-126K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-491P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-252F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315B06
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-253K02.b	B6Ng01-253K02.g
ACC	GA060310	GA060311
length	1,273	564
definition	B6Ng01-253K02.b	B6Ng01-253K02.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	catgaccgtcgccctcttggctccctttttaggggagagagatcccgcgg aatttcttgccgggcatggtggcgcacgccttttatcccagcactcggga ggcagaggcaggcggatttctgagtttgaggccagcctggtctacaaagt gagtttcaggacagccaggactatacagagaaaccctgcctcaaaaacac caaaaaaaaaaaaattctttcatttttcaagtttgtatttgtttggtttc tttgtgtgtatatgtagtttaagagaataggcaatcaattcagaatacat ttggtcctgtgtgccatcatatggccttactactaaattaaatttctgta tcttttctatactgacgacacatggtatctacaacttagctgagtccttg gcttttgatttatactggaaaacactgcattggggctggcttacagttca gaagtttagtctattattgtcatggtaggaagcatggtgatgtgcaggca gatatggtgctggagaaggagctgacagtcctacgtctagatcagtaggc agctgggagagagaaagtcactgtcttgagcctttgaaacctcaaagccc acccccagtgacatccttctccaacaaggccacactcactccaacatggc catatgtcctaatagtattattccctatgaacctacaagggccatgttca ttcaaaacacagcacaagttgaaagtcactgataacatgtactgaggaag tctgaggcatcataggtttctttttttttttttttccattttttattagg tatttaactcatttacatttccaatgctataccaaaagtcccccatatcc acccacccccactcccctgcccacccactccccctttttggccctggtat tcccctgtactggggcatataaagtttgcaagtccaatgggcctctcttt ccagtgatggccgactagggccatcttttgatatatatgcagctaggagt caagagctccggggtactggttagctcaataatgtgttccactatagggt gcagaatcccttagctccttggctactttctctagcctcctccatgggga gcctatggattcatcatagctgactgtggagcatccacttcttgtgttgg ctgggacccggcattagtcctacacaaaaagagacagcctactctgggcg tcttcaataaatctgctaggtaatgcatgggtgtcaagcgcgttgggaga tgcgtagcaattatatcgagcgt	tagtttgcttggtactgtaatctgtatcttccattgataggttttgggtt tttttgttttttgttttttttttcctgcttgatatagcacagtgccaagc agaaaggctgagaagcctcagggcactgaaactgtaggcagcctgcaggc aggctaggggtaacatggtaagtgccttgcaatgtaggctggggattgac actgtgcggaccatgcaggcagacttgggggtaacattgggcaccataca ggcaggctgggggtgacaagtcactgtagctattactatctgacctagca ttcctgatttcatggtatgacaaagaaacgggtgtactctgcaggctttt gtgtttctgtaaaacaaaatacctgacggaaaaaaaaaacttgatcaaag ggttatttcagttcatggtttaggggaatagctccattatggtgggagga agtgtgagctgaacaaacaattcatgcctggacatttagaaagcagagaa ggtgagagagagacacagagagaagggggagagaagaagagagagggaga gagagagagtgggg
quality values	Open. Hide. 5 3 2 3 2 2 5 5 3 3 5 5 5 5 11 5 6 7 4 7 5 9 11 6 8 4 4 6 7 9 8 5 5 5 5 12 13 14 10 6 19 18 11 10 11 12 16 13 9 6 6 9 9 7 9 7 9 16 13 13 13 18 28 42 25 25 28 52 52 46 62 45 39 43 52 33 17 19 20 31 39 9 9 8 7 8 8 8 6 5 8 9 21 29 51 56 56 62 62 41 44 47 56 56 54 49 47 59 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 51 45 51 56 34 46 38 46 43 50 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 50 62 50 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 45 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 51 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 54 62 62 62 62 62 62 62 62 62 62 62 47 54 62 62 62 62 62 62 62 62 62 49 54 52 62 62 58 58 54 58 52 58 54 58 58 28 58 58 31 58 58 46 58 58 58 54 52 58 48 54 58 58 58 54 58 52 58 58 54 58 49 49 47 51 58 54 58 58 48 58 58 58 52 58 58 58 58 52 58 35 58 42 58 46 58 58 58 52 58 58 52 54 58 58 58 58 58 58 58 58 50 54 58 54 51 51 51 58 58 50 41 58 54 58 46 58 58 53 58 58 54 50 51 58 58 58 49 49 51 47 58 42 50 50 58 51 50 58 58 50 49 50 40 50 51 50 52 50 50 58 50 51 50 52 50 51 58 53 52 49 48 50 37 46 58 52 50 51 58 58 51 47 50 50 52 51 58 50 50 49 48 58 58 52 53 50 40 50 42 53 52 39 51 50 58 58 43 52 41 47 49 40 33 50 51 52 52 46 41 35 58 47 44 40 50 40 58 52 49 50 39 53 58 50 30 54 54 51 38 45 53 53 42 52 42 39 51 53 42 54 53 52 53 54 49 38 52 45 38 47 47 50 40 37 32 41 38 39 42 51 45 37 39 45 51 47 28 47 52 53 31 39 42 45 32 54 13 51 32 32 45 52 36 47 47 23 44 32 54 40 53 43 54 54 54 54 54 54 54 54 54 54 54 54 54 25 33 29 21 34 52 52 52 53 37 33 26 31 52 29 39 30 28 21 53 39 31 31 30 40 40 34 34 53 52 34 39 25 32 52 32 31 26 23 45 36 45 31 30 27 30 34 33 28 36 51 46 35 36 33 31 51 51 51 38 25 28 30 31 34 32 28 30 51 31 31 31 51 51 51 30 30 33 31 37 46 46 29 32 31 27 46 31 38 35 46 43 43 32 31 31 46 37 46 28 44 46 46 46 31 31 22 28 46 28 26 43 42 16 28 33 35 32 46 46 29 18 36 31 24 31 28 31 46 46 29 24 21 19 30 19 25 46 32 30 23 46 26 31 31 36 27 31 38 33 31 26 30 24 46 44 29 38 33 32 34 27 22 21 48 34 30 32 32 31 18 13 21 16 35 11 14 25 23 37 22 35 31 8 38 12 29 24 20 14 27 32 48 48 32 30 23 12 20 19 20 21 27 18 25 34 32 22 34 20 21 15 5 9 14 32 32 32 34 11 31 8 27 22 13 25 25 48 43 19 11 19 24 32 28 28 8 16 18 17 32 32 13 17 6 9 9 31 24 25 29 5 4 6 26 9 6 17 11 20 14 10 14 34 16 3 5 7 6 7 8 28 11 9 31 18 16 9 13 20 28 13 11 21 6 7 14 16 9 13 15 11 27 29 20 21 16 15 21 19 10 16 5 5 20 13 24 12 23 12 24 18 38 29 12 28 10 30 22 12 17 13 8 5 10 8 5 22 10 10 12 3 3 3 4 12 12 18 22 10 10 23 7 8 6 5 6 22 9 15 21 19 8 14 17 7 12 7 5 9 8 16 4 15 6 8 21 9 21 26 10 1 3 26 18 6 7 6 19 9 9 6 4 6 9 7 8 5 6 5 10 4 12 9 7 3 5 7 5 7 8 9 6 7 10 13 7 1 2 3 7 19 10 6 5 9 4 3 2 5 2 3 4 5 18 12 5 1 2 4 3 4 9 9 8 12 7 5 8 7 18 9 11 3 16 13 8 4 9 7 8 9 5 8 9 6 1 1 2 4 4 8 8 10 4 5 7 6 3 4 12 5 6 5 16 8 10 5 6 5 6 3 3 3 4 1 2 5 5	Open. Hide. 62 59 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 54 59 59 62 62 62 62 62 62 62 59 62 62 62 62 59 62 59 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 35 59 62 62 59 62 62 62 62 62 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 56 62 62 62 62 62 56 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 58 58 54 54 54 58 58 54 54 52 52 54 54 52 54 58 52 52 54 52 58 40 52 47 41 58 46 54 54 54 58 58 54 58 54 58 45 54 54 58 58 54 58 54 54 54 45 58 58 50 48 58 58 58 58 58 50 51 49 49 58 51 52 51 58 58 58 51 58 58 58 46 48 51 58 49 49 51 58 58 39 50 50 51 58 54 58 51 58 58 58 51 49 58 46 58 39 58 51 41 58 39 58 58 39 58 39 58 40 58 40 35 37 46 58 51 39 58 32 51 37 58 51 37 58 58 58 58 54 29 54 30 54 54 17 54 54 32 54 38 54 50 54 44 54 50 54 24 42 38 54 19 54 39 54 34 54 44 51 44 46 24 14

Alignment Information

BAC End 1

BAC End 2

seq1: chr3_56182116_56182685
seq2: B6Ng01-253K02.g_67_636

seq1  GAATTCTAGTTTGCTTGGTACTGTAATCTGTATCTTCCATTGATAGGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGTTTGCTTGGTACTGTAATCTGTATCTTCCATTGATAGGTTT  50

seq1  TGGGTTTTTTTGTTTTTTGTTTTTTTTTTCCTGCTTGATATAGCACAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTTTTTTGTTTTTTGTTTTTTTTTTCCTGCTTGATATAGCACAGTG  100

seq1  CCAAGCAGAAAGGCTGAGAAGCCTCAGGGCACTGAAACTGTAGGCAGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCAGAAAGGCTGAGAAGCCTCAGGGCACTGAAACTGTAGGCAGCCT  150

seq1  GCAGGCAGGCTAGGGGTAACATGGTAAGTGCCTTGCAATGTAGGCTGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCAGGCTAGGGGTAACATGGTAAGTGCCTTGCAATGTAGGCTGGGG  200

seq1  ATTGACACTGTGCGGACCATGCAGGCAGACTTGGGGGTAACATTGGGCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGACACTGTGCGGACCATGCAGGCAGACTTGGGGGTAACATTGGGCAC  250

seq1  CATACAGGCAGGCTGGGGGTGACAAGTCACTGTAGCTATTACTATCTGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAGGCAGGCTGGGGGTGACAAGTCACTGTAGCTATTACTATCTGAC  300

seq1  CTAGCATTCCTGATTTCATGGTATGACAAAGAAACGGGTGTACTCTGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCATTCCTGATTTCATGGTATGACAAAGAAACGGGTGTACTCTGCAG  350

seq1  GCTTTTGTGTTTCTGTAAAACAAAATACCTGACGGAAAAAAAAAACTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTGTGTTTCTGTAAAACAAAATACCTGACGGAAAAAAAAAACTTGA  400

seq1  TCAAAGGGTTATTTCAGTTCATGGTTTAGGGGAATAGCTCCATTATGGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGGGTTATTTCAGTTCATGGTTTAGGGGAATAGCTCCATTATGGTG  450

seq1  GGAGGAAGTGTGAGCTGAACAAACAATTCATGCCTGGACATTTAGAAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAAGTGTGAGCTGAACAAACAATTCATGCCTGGACATTTAGAAAGC  500

seq1  AGAGAAGGTGAGAGAGAGACACAGAGAGAAGGGGGAGAGAAGAAGAGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGGTGAGAGAGAGACACAGAGAGAAGGGGGAGAGAAGAAGAGAGA  550

seq1  GGGAGAGAGAGAGAGTGGGG  570
      ||||||||||||||||||||
seq2  GGGAGAGAGAGAGAGTGGGG  570

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information