BAC Information

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BAC

Clone NameB6Ng01-255A10
Chromosome3 (Build37)
Map Location 56,111,228 - 56,112,086
singlet/doubletsinglet
Overlap genenone
Upstream geneDclk1, Mab21l1, 4933417G07Rik
Downstream geneLOC100040139, LOC666585, Tm4sf1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255A10.bB6Ng01-255A10.g
ACCGA061337GA061338
length8591,166
definitionB6Ng01-255A10.b B6Ng01-255A10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttaatgcaaccaatttatattttaggaattcgagtttacaatac
ttcagcaactcttttgcaaatgagactaatttattattattggtttaata
aaaacaaattctatcttctctgagttatcagcattaattaacatacaaga
ctacatttttattctatgtcagtgtgcatttcataagcttctgcaggttt
attgatagaataagctactgttacttctactaaatatttaagattatgaa
aaatgcaaatatgtgtttaactaaattaaatcatcattccaacaaaattt
gttccaattgcatttgcattttgtaatatgttggataggtgattttcaag
acctttagctaacccggttactggactgacagatactaacctgagtgaac
tgatagctattcccaggcgacttggatcatctctaagtaagatgggatgg
agaagcagcaattactagacatcacttagagttttgtattttaattccct
tacttgtgtacagtatagagatgttacattattttttttaactgcagaaa
tacatgtgttcattttgcaatttgaaaatgtgtactaatgcgttcagaaa
tttatagagctcatacttagctatagtatgatggattcatgtatatgatt
ttcaaaagaaatccctaatatcaaatattatattggggaaaagtttttag
atttatcttttataatgacaaagctttcttagattactatttggataata
tagacaattctaacatgtaatctgccaaggtgacaaacttctatagcttt
ttgttttgttttgttttgttttgttgtctttttgggggtttttgtttgtt
tgttttttg

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggcggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaactgtggtacatctacacaatg
gagtactactcagctattaaaaagattgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcattgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttcgaaggagttacagagacaaagattggagctgagatga
aaggatggaccatgtagagactgccttatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgcccacagtcagctaatggatggatcacagggctccca
atggagagctagagaaagtaccaggagctaaagggatctgcaccctatag
gtgatcacgtatgactacagtaccccggagctctgactctagctgcatat
gtatcaaagatgctagtcgcatcacttgaagagaggcccatggacacaac
ctttaatgccagaaacgggaccaggtcaacggatgcagtacgggaattgg
cttacctcctatctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_56111228_56112086
seq2: B6Ng01-255A10.b_46_904 (reverse)

seq1  CAAAAAACAAACAAACAAAAACCCCCAAAAAGACAACAAAACAAAACAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAACAAACAAACAAAAACCCCCAAAAAGACAACAAAACAAAACAAA  50

seq1  ACAAAACAAAAAGCTATAGAAGTTTGTCACCTTGGCAGATTACATGTTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAACAAAAAGCTATAGAAGTTTGTCACCTTGGCAGATTACATGTTAG  100

seq1  AATTGTCTATATTATCCAAATAGTAATCTAAGAAAGCTTTGTCATTATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTCTATATTATCCAAATAGTAATCTAAGAAAGCTTTGTCATTATAA  150

seq1  AAGATAAATCTAAAAACTTTTCCCCAATATAATATTTGATATTAGGGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAAATCTAAAAACTTTTCCCCAATATAATATTTGATATTAGGGATT  200

seq1  TCTTTTGAAAATCATATACATGAATCCATCATACTATAGCTAAGTATGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGAAAATCATATACATGAATCCATCATACTATAGCTAAGTATGAG  250

seq1  CTCTATAAATTTCTGAACGCATTAGTACACATTTTCAAATTGCAAAATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATAAATTTCTGAACGCATTAGTACACATTTTCAAATTGCAAAATGA  300

seq1  ACACATGTATTTCTGCAGTTAAAAAAAATAATGTAACATCTCTATACTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATGTATTTCTGCAGTTAAAAAAAATAATGTAACATCTCTATACTGT  350

seq1  ACACAAGTAAGGGAATTAAAATACAAAACTCTAAGTGATGTCTAGTAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAGTAAGGGAATTAAAATACAAAACTCTAAGTGATGTCTAGTAATT  400

seq1  GCTGCTTCTCCATCCCATCTTACTTAGAGATGATCCAAGTCGCCTGGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTTCTCCATCCCATCTTACTTAGAGATGATCCAAGTCGCCTGGGAA  450

seq1  TAGCTATCAGTTCACTCAGGTTAGTATCTGTCAGTCCAGTAACCGGGTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTATCAGTTCACTCAGGTTAGTATCTGTCAGTCCAGTAACCGGGTTA  500

seq1  GCTAAAGGTCTTGAAAATCACCTATCCAACATATTACAAAATGCAAATGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAAGGTCTTGAAAATCACCTATCCAACATATTACAAAATGCAAATGC  550

seq1  AATTGGAACAAATTTTGTTGGAATGATGATTTAATTTAGTTAAACACATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGAACAAATTTTGTTGGAATGATGATTTAATTTAGTTAAACACATA  600

seq1  TTTGCATTTTTCATAATCTTAAATATTTAGTAGAAGTAACAGTAGCTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATTTTTCATAATCTTAAATATTTAGTAGAAGTAACAGTAGCTTAT  650

seq1  TCTATCAATAAACCTGCAGAAGCTTATGAAATGCACACTGACATAGAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCAATAAACCTGCAGAAGCTTATGAAATGCACACTGACATAGAATA  700

seq1  AAAATGTAGTCTTGTATGTTAATTAATGCTGATAACTCAGAGAAGATAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTAGTCTTGTATGTTAATTAATGCTGATAACTCAGAGAAGATAGA  750

seq1  ATTTGTTTTTATTAAACCAATAATAATAAATTAGTCTCATTTGCAAAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTTTTATTAAACCAATAATAATAAATTAGTCTCATTTGCAAAAGA  800

seq1  GTTGCTGAAGTATTGTAAACTCGAATTCCTAAAATATAAATTGGTTGCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTGAAGTATTGTAAACTCGAATTCCTAAAATATAAATTGGTTGCAT  850

seq1  TAAGAATTC  859
      |||||||||
seq2  TAAGAATTC  859


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