BAC Information

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BAC

Clone NameB6Ng01-255G17
Chromosome3 (Build37)
Map Location 23,787,132 - 23,944,085
singlet/doubletdoublet
Overlap geneEG635702
Upstream geneLOC623751, LOC100039548
Downstream geneEG665189
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255G17.bB6Ng01-255G17.g
ACCGA061630GA061631
length1,2171,036
definitionB6Ng01-255G17.b B6Ng01-255G17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,942,843 - 23,944,085)(23,787,132 - 23,788,172)
sequence
gaattccactgaaagagaacaaaggatttgtaagcattttgatttcttca
gtctcatctcagtagttttagcctcgaaatcattctgacccagttttccc
catccagaaagagtgcgttaagtgtatgcagtaaagggtttatttagaat
cttgaagtagaaaaaaagaaaagaaaaaaagaaagaaagaaagaaaacct
gtacctatatgttaaagatatctcctcatctttaaatctgtatagagttg
ctttatttttatctattcatgaatcttatctgaggattataaatttcaca
tcccttcctattttgagacacttctaatttatgaagtatgtactcatgta
agtcatacttagaatctgcatttgaaaatttaacagtatatcgaaggtat
attttaaacatctaccagtataaatattatatgtataaatatatatgttt
tatatatatattatttttctctcaatattcaaaaaatatacaatgcgaaa
ctatatacatttacactgtcttatatatttttaatgagttagacatcatt
taaagtatgacaataatatataatcaagaaacaaatttaaagttgttgta
tacaatgcatttgaacatgcaatgattttgttatacatatgaagtctcag
aagcaaagcctcatgagtattgtcttagtgtctattactgtgatagagct
acaaaaaggtaacttgggtaggggaagggtttacttctttgtttagttca
aagtccatcactgatggaagcttcagaaggaactaaagcagcagggaaca
tggaatctgtaactgaagcagaaaaaaatgaaggaaatgtaactggtttg
cttaaccagcttggttcaagcacccagaaccactgaccaacattggtact
gcccgtagtaatctcaaccttcccaataatcaatcaaaagggcaccacag
gccaacccagtacaattccttccatcttcccaaatgactctagcttggtg
tcaagttatttaaagtagccaacagatactaatttgcaattaagaataaa
cggtgtatgatatcctacgatcatgacatgacaaaatgaagataattttg
ggtagttgttctcttatgcttaataggctccaagtcagggtaaggccatt
gaccatcatgatataagactctggtgatccggattagatcctatactcaa
taattccgagaagctgc

gaattcacagaaaattagaaataataattttggcttatattcatttttga
acataagaaataactgaatatgagagaaacttacctaatcacttacagat
acctaaagcctttttaggaagtgtaactataaaaatatatttaagagaat
acttgagatacatgtatatgtgtataggcttgtgcagtttaaatttgaac
actaaaaatatacaggtatacatataaatgatttatataaatatcttaca
tatatgtgcatatactttaaaaatctgaaattatacaaatacacacacgt
atatatttatatatatttatatatatttatatgtatatatatatgtatat
atatatattcttctgcatatttgtggtaatctttataaatctgtacgtgg
tattttctgtataaatatatgtagtatattttatatacatatgtgtaaat
attcatacatgcatagtcactatataaatattataataaaatttagtcac
accaactaaaacatatttatatgtataatatttctcatatacttgtgcta
aacatctcatcattttaggttaaagaagatttcatggtggtatatttcca
tgaacaccatattcaatctgtcctttgtacaatgtcaattttgttcactt
tactcctttccacctactttcagctctttacaataaagttcaccatacag
aactatttccatgatattggacttacaagtatgtgtattgatcattccta
actttccattctctgcttcaagtataaaaatgagtatgtcttgaaaatag
gtcctatctctctcttctagcttctttctcttccagctatatttgtgatc
tttatagtaatctgtctactctatctgagcatgtcttcttactacctatg
gactatcattgctagatcacatacaggtttctccctctttcaacccaagt
gtagatgtgagagaccttacctatcactgcagaatacttaaatcctctta
ggaagtgtaactttccttaaaatacatctattgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_23942843_23944085
seq2: B6Ng01-255G17.b_50_1266 (reverse)

seq1  GCAGCTTCT-GATATTATTGAGTATATATGAATTCTCTAAAATCATGAAT  49
      ||||||||| |  |||||||||||||   | |   |||  ||||  ||  
seq2  GCAGCTTCTCGGAATTATTGAGTATA---GGA---TCT--AATCCGGA--  40

seq1  TCACAGGAGTCTTAATATCATTGATAGTCAATTGGGCCTTTACACCTGAC  99
      ||||  ||||||| |||||| |||| ||||||  |||| |||| ||||||
seq2  TCACCAGAGTCTT-ATATCA-TGATGGTCAAT--GGCC-TTAC-CCTGAC  84

seq1  CTGGGAAGCTAATTATAGCAT-AGAGACAAACTACCCAAAATTTATCTTC  148
       |||  |||  |||| ||||| |||||  |||||||||||| ||||||||
seq2  TTGG--AGCCTATTA-AGCATAAGAGAACAACTACCCAAAA-TTATCTTC  130

seq1  AATATTTTGTCATGTCATGATCGTAGGATAATCAATACA-CGTTTATTCT  197
         |||||||||||||||||||||||||| ||| ||||| ||||||||||
seq2  ---ATTTTGTCATGTCATGATCGTAGGAT-ATC-ATACACCGTTTATTCT  175

seq1  TAATTGCAAATTAGTATCTGTTTGGCTACTTTTAAAATAACTTGACA-CA  246
      |||||||||||||||||||| |||||||||||  ||||||||||||| ||
seq2  TAATTGCAAATTAGTATCTG-TTGGCTACTTT--AAATAACTTGACACCA  222

seq1  AGCTAGAGTCATTTGGGAAGATGGAAGGAATTGTACTGGGTTGGCCTGTG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGAGTCATTTGGGAAGATGGAAGGAATTGTACTGGGTTGGCCTGTG  272

seq1  GTGCCCTTTTTGATTGATTATTGGGAAGGTTGAGATTACTACGGGCAGTA  346
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCC-TTTTGATTGATTATTGGGAAGGTTGAGATTACTACGGGCAGTA  321

seq1  CCAATGTTGGTCAGTGGTTCTGGGTGCTTGAACCAAGCTGGTTAAGCAAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGTTGGTCAGTGGTTCTGGGTGCTTGAACCAAGCTGGTTAAGCAAA  371

seq1  CCAGTTACATTTCCTTCATTTTTTTCTGCTTCAGTTACAGATTCCATGTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTACATTTCCTTCATTTTTTTCTGCTTCAGTTACAGATTCCATGTT  421

seq1  CCCTGCCTGCTTTAGTTCCTTCTGAAGCTTCCATCAGTGATGGACTTTGA  496
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTG-CTGCTTTAGTTCCTTCTGAAGCTTCCATCAGTGATGGACTTTGA  470

seq1  ACTAAACAAAGAAGTAAACCCTTCCCCTACCCAAGTTACCTTTTTGTAGC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAACAAAGAAGTAAACCCTTCCCCTACCCAAGTTACCTTTTTGTAGC  520

seq1  TCTATCACAGTAATAGACACTAAGACAATACTCATGAGGCTTTGCTTCTG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCACAGTAATAGACACTAAGACAATACTCATGAGGCTTTGCTTCTG  570

seq1  AGACTTCATATGTATAACAAAATCATTGCATGTTCAAATGCATTGTATAC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTCATATGTATAACAAAATCATTGCATGTTCAAATGCATTGTATAC  620

seq1  AACAACTTTAAATTTGTTTCTTGATTATATATTATTGTCATACTTTAAAT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACTTTAAATTTGTTTCTTGATTATATATTATTGTCATACTTTAAAT  670

seq1  GATGTCTAACTCATTAAAAATATATAAGACAGTGTAAATGTATATAGTTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTCTAACTCATTAAAAATATATAAGACAGTGTAAATGTATATAGTTT  720

seq1  CGCATTGTATATTTTTTGAATATTGAGAGAAAAATAATATATATATAAAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCATTGTATATTTTTTGAATATTGAGAGAAAAATAATATATATATAAAA  770

seq1  CATATATATTTATACATATAATATTTATACTGGTAGATGTTTAAAATATA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATATTTATACATATAATATTTATACTGGTAGATGTTTAAAATATA  820

seq1  CCTTCGATATACTGTTAAATTTTCAAATGCAGATTCTAAGTATGACTTAC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCGATATACTGTTAAATTTTCAAATGCAGATTCTAAGTATGACTTAC  870

seq1  ATGAGTACATACTTCATAAATTAGAAGTGTCTCAAAATAGGAAGGGATGT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTACATACTTCATAAATTAGAAGTGTCTCAAAATAGGAAGGGATGT  920

seq1  GAAATTTATAATCCTCAGATAAGATTCATGAATAGATAAAAATAAAGCAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTATAATCCTCAGATAAGATTCATGAATAGATAAAAATAAAGCAA  970

seq1  CTCTATACAGATTTAAAGATGAGGAGATATCTTTAACATATAGGTACAGG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATACAGATTTAAAGATGAGGAGATATCTTTAACATATAGGTACAGG  1020

seq1  TTTTCTTTCTTTCTTTCTTTTTTTCTTTTCTTTTTTTCTACTTCAAGATT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTCTTTCTTTCTTTTTTTCTTTTCTTTTTTTCTACTTCAAGATT  1070

seq1  CTAAATAAACCCTTTACTGCATACACTTAACGCACTCTTTCTGGATGGGG  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATAAACCCTTTACTGCATACACTTAACGCACTCTTTCTGGATGGGG  1120

seq1  AAAACTGGGTCAGAATGATTTCGAGGCTAAAACTACTGAGATGAGACTGA  1196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGGGTCAGAATGATTTCGAGGCTAAAACTACTGAGATGAGACTGA  1170

seq1  AGAAATCAAAATGCTTACAAATCCTTTGTTCTCTTTCAGTGGAATTC  1243
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCAAAATGCTTACAAATCCTTTGTTCTCTTTCAGTGGAATTC  1217


seq1: chr3_23787132_23788172
seq2: B6Ng01-255G17.g_66_1101

seq1  GAATTCACAGAAAATTAGAAATAATAATTTTGGCTTATATTCATTTTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGAAAATTAGAAATAATAATTTTGGCTTATATTCATTTTTGA  50

seq1  ACATAAGAAATAACTGAATATGAGAGAAACTTACCTAATCACTTACAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAGAAATAACTGAATATGAGAGAAACTTACCTAATCACTTACAGAT  100

seq1  ACCTAAAGCCTTTTTAGGAAGTGTAACTATAAAAATATATTTAAGAGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAAAGCCTTTTTAGGAAGTGTAACTATAAAAATATATTTAAGAGAAT  150

seq1  ACTTGAGATACATGTATATGTGTATAGGCTTGTGCAGTTTAAATTTGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAGATACATGTATATGTGTATAGGCTTGTGCAGTTTAAATTTGAAC  200

seq1  ACTAAAAATATACAGGTATACATATAAATGATTTATATAAATATCTTACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAAATATACAGGTATACATATAAATGATTTATATAAATATCTTACA  250

seq1  TATATGTGCATATACTTTAAAAATCTGAAATTATACAAATACACACACGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTGCATATACTTTAAAAATCTGAAATTATACAAATACACACACGT  300

seq1  ATATATTTATATATATTTATATATATTTATATGTATATATATATGTATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTTATATATATTTATATATATTTATATGTATATATATATGTATAT  350

seq1  ATATATATTCTTCTGCATATTTGTGGTAATCTTTTAAAATCTATACATGG  400
      ||||||||||||||||||||||||||||||||||  |||||| ||| |||
seq2  ATATATATTCTTCTGCATATTTGTGGTAATCTTTATAAATCTGTACGTGG  400

seq1  TATTTTCTGTATAAATATATGTAGTATATTTTATATACATATGTGTAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCTGTATAAATATATGTAGTATATTTTATATACATATGTGTAAAT  450

seq1  ATTCATACATGCATAGTCACTATATAAATATTATAATAAAATTTAGTCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATACATGCATAGTCACTATATAAATATTATAATAAAATTTAGTCAC  500

seq1  ACCAACTAAAACATATTTATATGTATAATATTTCTCATATACTTGTGCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACTAAAACATATTTATATGTATAATATTTCTCATATACTTGTGCTA  550

seq1  AACATCTCATCATTTTAGGTTAAAGAAGATTTCATGGTGGTATATTTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCTCATCATTTTAGGTTAAAGAAGATTTCATGGTGGTATATTTCCA  600

seq1  TGAACACCATATTCAATCTGTCCTTTGTACAATGTCAATTTTGTTCACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACACCATATTCAATCTGTCCTTTGTACAATGTCAATTTTGTTCACTT  650

seq1  TACTCCTTTCCACCTACTTTCAGCTCTTTACAATAAAGTTCACCATACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCTTTCCACCTACTTTCAGCTCTTTACAATAAAGTTCACCATACAG  700

seq1  AACTATTTCCATGATATTGGACTTACAAGTATGTGTATTAATCATTCCTA  750
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AACTATTTCCATGATATTGGACTTACAAGTATGTGTATTGATCATTCCTA  750

seq1  ACTTTCCATTCTCTGCTTCAAGTATAAAAATG-GTATGTCTTGAAAATAG  799
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ACTTTCCATTCTCTGCTTCAAGTATAAAAATGAGTATGTCTTGAAAATAG  800

seq1  GTCCTATCTCTCTCTTCTAGCTTCTTTCTTCTTCCAGCTATATTTGTGAT  849
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GTCCTATCTCTCTCTTCTAGCTTCTTTC-TCTTCCAGCTATATTTGTGAT  849

seq1  CTTTATTAGTAATCTGTCTTACTCTATCTTGAGCATGTCTTCTTACTACC  899
      ||||| |||||||||||| ||||||||| |||||||||||||||||||||
seq2  CTTTA-TAGTAATCTGTC-TACTCTATC-TGAGCATGTCTTCTTACTACC  896

seq1  TATGGACTATCATTGCTAGATCACATACAGGTTTCTCCCTCTTTCAAACC  949
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TATGGACTATCATTGCTAGATCACATACAGGTTTCTCCCTCTTTC-AACC  945

seq1  CAAGTGGTAGATGTGAGAGAACCTTACCTAATCACCTGCAGATACCTAAA  999
      ||||| ||||||||||||| ||||||||| |||| |||||||   || ||
seq2  CAAGT-GTAGATGTGAGAG-ACCTTACCT-ATCA-CTGCAGAATACTTAA  991

seq1  ATCTTCTTAGGAAGTGTAACTT--CCTAAAATACATCTA-TGTGA  1041
      ||| ||||||||||||||||||  | ||||||||||||| |||||
seq2  ATCCTCTTAGGAAGTGTAACTTTCCTTAAAATACATCTATTGTGA  1036


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