BAC Information

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BAC

Clone NameB6Ng01-255K04
Chromosome3 (Build37)
Map Location 15,278,324 - 15,279,485
singlet/doubletsinglet
Overlap genenone
Upstream geneEG622229, LOC668062, Slc7a12, LOC668068, Lrrcc1, E2f5, 1810022K09Rik, LOC100039929, Car13, EG545507, Car1, LOC100041785, Car3, Car2, EG634323, LOC100039985
Downstream geneLOC751864, Sirpb1, LOC668101, LOC100038947, LOC622425, LOC664795, LOC381484, Ythdf3, LOC100040034
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255K04.bB6Ng01-255K04.g
ACCGA061796GA061797
length9581,154
definitionB6Ng01-255K04.b B6Ng01-255K04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatcctgaatggcagagaagcacctgaaaaaatg
ttcaatatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagataaaaaattcaggtgacagc
agatgctggcaaggttgtggataaagaggaacactcctccattgttggtg
gtattgcaagcttgtacaaccactctggaaatcaatctggcggttcctca
gaaaattggacatagtactactggaagatcctgtaatatctctcctgggc
atatatccagaagatgttccaactggtaagaaggactcatgctccactat
gttcatagtagccttatttgtaatagccagaactggaaggaactcagatg
cccctcaacagaggaatggatacagaaaaggcggtacatttacacaaagg
agtactgctcagctattaaaaagaatgaatttatgaaattcctaggcaaa
tggatgaacctggagggcatcatcctgagtgaggtaacccaatcacagag
aaactcacacaatatgtactcactgataagtggatatgagaccagaaact
taggatacccaagatataagatataatttgctaaacacatgaaactccag
tagaaggaagaccaacgtgtggacactttgccccttcttagaattgggaa
caaaacacccgtggaaaggagttacagagacaaagtttggagctgtaaca
aaaggatggaccatctagagactgccatatctggtgatccatcccctaat
cagcttccaaacgctgacaccattgcatacactagcaagattttgctgaa
aggacccagatagagcttctttttgtgagactattgccagggacctagca
aacagagattggatgcctcactgtcagcctattggatgggaccacagggc
ttcctaat
gaattcttgtttctgtcagactttcaaaatgagcatctggctgcctcatc
tggtgtatgaagatcatccccatggagacaatctccagaaggcaagccat
aacatttgcccaaacctgcagtgtctgttagggtaggtccctgatatgaa
atgatctttgatagtcccaagtcaagggcctagcttggttgacacatcta
aagcagggctgagcaattccacatgaaatgtgggcatatctcacattttc
agagtgtgctatgaataaagtggtaacaaaaaaagtacaccattccctgg
gtctatcacttcgtgcattgatgtgtttttcctcctgggtgggaggagat
aaacatcttggatagtgttcctgcttaacaacctcctgccatctctgttg
ccataaataatggaacatgacttaagtatgccctgtgaaaagaaagaaaa
gacttaattagggaagcaagctcactatggagtcagtaggccttggctga
ccctaagaagacagccagttctcagggtctttatgaagacactaagttgg
gacagattgagaactaagtgatttgtggcaggcagacaaggttatggatt
taccccctttcccaggtggggaagctctagcaaatacttctcctcagcct
cctttattcacagttggagaagttaccctatgaacaggagggtcttttcc
acacatgattctcacttgttgcaattggaatactggactttatttcaacc
tgttggagatatcagaaatagaaggaaagtgtagtacttaccaaatacaa
ataactcagtgtctcccacagactgactctcctttggcagagtctgccat
gttgaacttcacacagtagtaggtacaagcatcagcatgtatgacattac
taatgaagatggaaaagtccagattgtttctcattgaagcatctgaaaga
tttgttaccctggggtttggctatcctatgaaatttcatattatgttgct
gactgtgtctcacagccctgaccacttcatgggctgcacaggtacagatg
tcacagtgcacttcagaagtgctgacccatcacagccacagaaaaggtgt
ttctcagctgaatcacctcagctatcccacagtatttccttcgaacatca
gtta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_15278324_15279485
seq2: B6Ng01-255K04.g_69_1222

seq1  GAATTCTTGTTTCTGTCAGACTTTCAAAATGAGCATCTGGCTGCCTCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTTTCTGTCAGACTTTCAAAATGAGCATCTGGCTGCCTCATC  50

seq1  TGGTGTATGAAGATCATCCCCATGGAGACAATCTCCAGAAGGCAAGCCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTATGAAGATCATCCCCATGGAGACAATCTCCAGAAGGCAAGCCAT  100

seq1  AACATTTGCCCAAACCTGCAGTGTCTGTTAGGGTAGGTCCCTGATATGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTGCCCAAACCTGCAGTGTCTGTTAGGGTAGGTCCCTGATATGAA  150

seq1  ATGATCTTTGATAGTCCCAAGTCAAGGGCCTAGCTTGGTTGACACATCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCTTTGATAGTCCCAAGTCAAGGGCCTAGCTTGGTTGACACATCTA  200

seq1  AAGCAGGGCTGAGCAATTCCACATGAAATGTGGGCATATCTCACATTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGGGCTGAGCAATTCCACATGAAATGTGGGCATATCTCACATTTTC  250

seq1  AGAGTGTGCTATGAATAAAGTGGTAACAAAAAAAGTACACCATTCCCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGTGCTATGAATAAAGTGGTAACAAAAAAAGTACACCATTCCCTGG  300

seq1  GTCTATCACTTCGTGCATTGATGTGTTTTTCCTCCTGGGTGGGAGGAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATCACTTCGTGCATTGATGTGTTTTTCCTCCTGGGTGGGAGGAGAT  350

seq1  AAACATCTTGGATAGTGTTCCTGCTTAACAACCTCCTGCCATCTCTGTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATCTTGGATAGTGTTCCTGCTTAACAACCTCCTGCCATCTCTGTTG  400

seq1  CCATAAATAATGGAACATGACTTAAGTATGCCCTGTGAAAAGAAAGAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAAATAATGGAACATGACTTAAGTATGCCCTGTGAAAAGAAAGAAAA  450

seq1  GACTTAATTAGGGAAGCAAGCTCACTATGGAGTCAGTAGGCCTTGGCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTAATTAGGGAAGCAAGCTCACTATGGAGTCAGTAGGCCTTGGCTGA  500

seq1  CCCTAAGAAGACAGCCAGTTCTCAGGGTCTTTATGAAGACACTAAGTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAGAAGACAGCCAGTTCTCAGGGTCTTTATGAAGACACTAAGTTGG  550

seq1  GACAGATTGAGAACTAAGTGATTTGTGGCAGGCAGACAAGGTTATGGATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGATTGAGAACTAAGTGATTTGTGGCAGGCAGACAAGGTTATGGATT  600

seq1  TACCCCCTTTCCCAGGTGGGGAAGCTCTAGCAAATACTTCTCCTCAGCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCCCTTTCCCAGGTGGGGAAGCTCTAGCAAATACTTCTCCTCAGCCT  650

seq1  CCTTTATTCACAGTTGGAGAAGTTACCCTATGAACAGGAGGGTCTTTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTATTCACAGTTGGAGAAGTTACCCTATGAACAGGAGGGTCTTTTCC  700

seq1  ACACATGATTCTCACTTGTTGCAATTGGAATACTGGACTTTATTTCAACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATGATTCTCACTTGTTGCAATTGGAATACTGGACTTTATTTCAACC  750

seq1  TGTTGGAGATATCAGAAATAGAAGGAAAGTGTAGTACTTACCAAATACAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGAGATATCAGAAATAGAAGGAAAGTGTAGTACTTACCAAATACAA  800

seq1  ATAACTCAGTGTCTCCCACAGACTGACTCTCC-TTGGCAGAGTCTGCCAT  849
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ATAACTCAGTGTCTCCCACAGACTGACTCTCCTTTGGCAGAGTCTGCCAT  850

seq1  GTTGAACTTCACACAGTAGTAGGTACAAGCATCAGCATGTATGACATTAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAACTTCACACAGTAGTAGGTACAAGCATCAGCATGTATGACATTAC  900

seq1  TAATGAAGATGGAAAAGTCCAGATTGTTTCTCATTGAAGCATCTGAAAGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAAGATGGAAAAGTCCAGATTGTTTCTCATTGAAGCATCTGAAAGA  950

seq1  TTTGTTACCCTGGGGTTTGGCTATCCTATGAAATTTCATATTATGTTGCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTACCCTGGGGTTTGGCTATCCTATGAAATTTCATATTATGTTGCT  1000

seq1  GACTGTGTCTCACAGCCCTGAACCACTTCATGGGCTGCACAGGGAACAGG  1049
      |||||||||||||||||||| |||||||||||||||||||| || |||  
seq2  GACTGTGTCTCACAGCCCTG-ACCACTTCATGGGCTGCACA-GGTACA--  1046

seq1  GTGGTCACAGTGCACTTCAGAGTGGCTGACCCATCAACAGCAACAG-AAA  1098
      |  ||||||||||||||||||   ||||||||||| ||||| |||| |||
seq2  GATGTCACAGTGCACTTCAGAAGTGCTGACCCATC-ACAGCCACAGAAAA  1095

seq1  GTGGTTTCTCCAGCTGAATCAACTTCAGCTATTCCACAGTTATTCCTTCA  1148
      |  |||||| |||||||||| || |||||||| |||||||  ||||||| 
seq2  GGTGTTTCT-CAGCTGAATC-ACCTCAGCTATCCCACAGTATTTCCTTC-  1142

seq1  GAAAACATCAGTTA  1162
         |||||||||||
seq2  --GAACATCAGTTA  1154