BAC Information

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BAC

Clone NameB6Ng01-255P01
Chromosome3 (Build37)
Map Location 72,979,406 - 72,980,476
singlet/doubletsinglet
Overlap genenone
Upstream gene2010204N08Rik, Slitrk3
Downstream geneBche, LOC667425
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255P01.bB6Ng01-255P01.g
ACCGA062026GA062027
length1,074655
definitionB6Ng01-255P01.b B6Ng01-255P01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaagatgggaataataagtaggatattgagtctgtataaacta
tggagagtcacgtaattatgaggataatggattcatctaagtaaaacact
ggaacatcacatagaagttacttctgtattggaggatttttttctcagaa
tagtaactggatgcagtatatactcatttgtccttactaacagatatgca
atgctttggggggagaatggcagtctactctctattcaggaactcaagta
attttatgccactattttgcttcttcctttggggaaaaaaaatggatcgt
tttctgggaattttgtgcaaattgttttagtcatttctacctgtccccca
tcacctcccaatatattcatcttctctctccatctaaatgtatttcctgt
taagatctatcaagtccaatttgtgcttcctatttcattaatatgtaatt
tcatttgaaaactatataccattatatctagaaattatttccttatttgt
ttagggattcactatcagtaattcattcatttaacaaaattttaatgagg
attagcacgaaagcaaacttttcttttttttttttccattttttatttgg
tatttaactcatttacatttccaatgctataccaaaagtcccccatatcc
acccacccccactcccctgcccacccactccccctttttggccctggtgt
tcccctgtactggggcatataaagtttgcaagtccaatgggcctctcttt
ccagtgatggccgactaggccatcttttgatatatatgcagctagagtca
agagctccggggtactggttagttcataatgttgttccaccttatagggt
tgcagatccctttagctccttgggtactttctctagctcctccattggga
gccctatgatccatccatttagctgactgtgagcatccactttctgtgtt
tgctagccccggcatagtctcacaagagacagctacatctggtcctttca
ataaaatcttgctagtgtatgcagtgtgtcagcgtttgatgctgaattat
ggggatgaatcctggattggcagt

gaattcccaggcccataattaaacttatactaccattttgctaaatggac
ctattaccacactaacctctaacttcatatctttatgcccacggatcaat
ttagttcttcagacccaagcaaagaactatattttcacagtggatgatgg
ttaatacagaaactcacaaaaagtgaatgtgcaaaaaaaaaaaaaaaagt
ctatgaaatactcaggcaagaatggggcatcaaccgcacagtcccctctc
caagtgtcaggggccactctagaagaggaagtgggaagattgtaagagct
aggaatttgggaggatgagaaaaaaatactcagcatctttctaacataac
tgagctgatgtactcctgtacttagaagctacaacagtcacgcaatgcaa
cagctcagagagtcaaaattctagaattgtgaagaaagataaacctcata
cctaattaagaagatgtaggtgctatgggaaactgatgttttctggacaa
gaaaatcagttttctgtaagattttggctccttgtggtttgtccatagtc
aagtagttggctacacacccaaagtatgtggacaatacagtttggagttg
gtagactatttagaaagaggtttaatatatagggaaatgggtggatgtgg
gagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_72979406_72980476
seq2: B6Ng01-255P01.b_49_1118 (reverse)

seq1  ACTGCCATATCCAGGGATCCACCCCATAA-TCAGCATCCAAACGCTGACA  49
      ||||||| |||||||  ||  |||||||| ||||||| ||||||||||||
seq2  ACTGCCA-ATCCAGGATTCATCCCCATAATTCAGCAT-CAAACGCTGACA  48

seq1  CCATTGCATACACTAGCAAGATTTTATTGAAAGGACCCAGATGTAGCTGT  99
       || ||||||||||||||||||||||||||||||| ||||||||||||||
seq2  -CACTGCATACACTAGCAAGATTTTATTGAAAGGA-CCAGATGTAGCTGT  96

seq1  CTCTTGTGAGACTATGCCGGGGCCTAGCAAACACAG-AAGTGGATGCTCA  148
      |||||||||||||||||||||| ||||||||||||| |||||||||||||
seq2  CTCTTGTGAGACTATGCCGGGG-CTAGCAAACACAGAAAGTGGATGCTCA  145

seq1  CAGTCAGCT-AATGGATGGATCATAGGGCTCCCAATGGAGGAGCTAGAGA  197
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCAGCTAAATGGATGGATCATAGGGCTCCCAATGGAGGAGCTAGAGA  195

seq1  AAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTAT-AGGTGGAACAACA  246
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAAGGTGGAACAACA  245

seq1  TTATGAACTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCATATATAT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAACTAACCAGTACCCCGGAGCTCTTGACTCTAGCTGCATATATAT  295

seq1  CAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACTT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACTT  345

seq1  GCAAACTTTATATGCCCCAGTACAGGGGAACACCAGGGCCAAAAAGGGGG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACTTTATATGCCCCAGTACAGGGGAACACCAGGGCCAAAAAGGGGG  395

seq1  AGTGGGTGGGCAGGGGAGTGGGGGTGGGTGGATATGGGGGACTTTTGGTA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGTGGGCAGGGGAGTGGGGGTGGGTGGATATGGGGGACTTTTGGTA  445

seq1  TAGCATTGGAAATGTAAATGAGTTAAATACCAAATAAAAAATGGAAAAAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATTGGAAATGTAAATGAGTTAAATACCAAATAAAAAATGGAAAAAA  495

seq1  AAAAAAGAAAAGTTTGCTTTCGTGCTAATCCTCATTAAAATTTTGTTAAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGAAAAGTTTGCTTTCGTGCTAATCCTCATTAAAATTTTGTTAAA  545

seq1  TGAATGAATTACTGATAGTGAATCCCTAAACAAATAAGGAAATAATTTCT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGAATTACTGATAGTGAATCCCTAAACAAATAAGGAAATAATTTCT  595

seq1  AGATATAATGGTATATAGTTTTCAAATGAAATTACATATTAATGAAATAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATAATGGTATATAGTTTTCAAATGAAATTACATATTAATGAAATAG  645

seq1  GAAGCACAAATTGGACTTGATAGATCTTAACAGGAAATACATTTAGATGG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCACAAATTGGACTTGATAGATCTTAACAGGAAATACATTTAGATGG  695

seq1  AGAGAGAAGATGAATATATTGGGAGGTGATGGGGGACAGGTAGAAATGAC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAAGATGAATATATTGGGAGGTGATGGGGGACAGGTAGAAATGAC  745

seq1  TAAAACAATTTGCACAAAATTCCCAGAAAACGATCCATTTTTTTTCCCCA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAATTTGCACAAAATTCCCAGAAAACGATCCATTTTTTTTCCCCA  795

seq1  AAGGAAGAAGCAAAATAGTGGCATAAAATTACTTGAGTTCCTGAATAGAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGAAGCAAAATAGTGGCATAAAATTACTTGAGTTCCTGAATAGAG  845

seq1  AGTAGACTGCCATTCTCCCCCCAAAGCATTGCATATCTGTTAGTAAGGAC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGACTGCCATTCTCCCCCCAAAGCATTGCATATCTGTTAGTAAGGAC  895

seq1  AAATGAGTATATACTGCATCCAGTTACTATTCTGAGAAAAAAATCCTCCA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAGTATATACTGCATCCAGTTACTATTCTGAGAAAAAAATCCTCCA  945

seq1  ATACAGAAGTAACTTCTATGTGATGTTCCAGTGTTTTACTTAGATGAATC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGAAGTAACTTCTATGTGATGTTCCAGTGTTTTACTTAGATGAATC  995

seq1  CATTATCCTCATAATTACGTGACTCTCCATAGTTTATACAGACTCAATAT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATCCTCATAATTACGTGACTCTCCATAGTTTATACAGACTCAATAT  1045

seq1  CCTACTTATTATTCCCATCTTGAGA  1071
      |||||||||||||||||||||||||
seq2  CCTACTTATTATTCCCATCTTGAGA  1070


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