BAC Information

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BAC

Clone NameB6Ng01-255P14
Chromosome14 (Build37)3 (Build37)
Map Location 78,321,459 - 78,321,82170,920,593 - 70,921,725
singlet/doubletsingletsinglet
Overlap geneEpsti1
Upstream geneLOC100043201, 9030625A04Rik, Ccdc122, D230005D02Rik, LOC100043755, LOC676171, EG629678, Gm1587, Dnajc15
Downstream geneAU021034, Tnfsf11, LOC219180, Akap11, Dgkh, LOC673649, 1300010F03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255P14.bB6Ng01-255P14.g
ACCGA062052GA062053
length9991,126
definitionB6Ng01-255P14.b B6Ng01-255P14.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(78,321,459 - 78,321,821)(70,920,593 - 70,921,725)
sequence
gaattctgactcttggctatgtactttattattcaggtttggaatatgca
ttcaataaccattcataactggctgagattggtgttgagtggtttgcatg
gctatttctggactacctctgagactgaaacattgcatcctacaggggaa
gctccctaaacagaaaggtaaacaactcaaaataacttttggaagtttct
gagagtgaacagtttccctggtcccttccctcccaaagtaagaaatgagg
ctcctgagagtcacaatcagacaaaagaaattgcaaagaagacattgaga
tttgacaagctttcgggaagaagcagaaactagctcagctgcctgaaaga
gcattagactgagtcacgtgaaagacatacactctaaccttttgagcttc
ctgcaggctgtgctgtgtgctccaggttctcagtttgtgagttgtcctgt
aatggggtggactttggcaagcaactattcttgagtaatttatgatcttg
taagtaacaccaataaaatacaattgcactttgaacaattcatattttgt
cttccttgggctccttttctgtcaagagtaggggtgtgtgtgtgtgcgtg
tgcgtgtgtgcgtgtgtgtgtgtgtgtgtgtgtgcgcacgtgtgtgtgtg
ttgcttctttcccaggaaaaagtattataataaattcctgtctctttctt
tgatggtttcatatgatgtaaatttttcattattgttgtacactccttga
aatgcacaccttataaaactattttaaattccctatgctagtatactgaa
atagtactgttttaagaacatttctaaatgaagtctgagaatattatgct
ttctaaatattgcttcatgtgatctatttaaattttggttctactaaaga
tttggggttgaatattattatttctggcactggtcttgctgtaactcgtt
atttatcccctgataaaattatttccacttctttcctctttaaaaatgg

gaattccagtggaccctagggatgccaacagtaactcacatctcagtaat
tccacaggctgttttctgttatctgttgctttattccatgcagtgatccc
agcaggtagaccaagcatggtttagtattgctcttctacactgtgacagc
aaaaaaacaccccagtgtttatgtggttcttggccattttgtatagaatg
taaatagccctggtcaatgttccgacatttcattaaaatttcagcttttc
tctttggttttgggatgtcaaaattatgctatcctcttgtcagtatttct
gtgttatttactgaacaatattttaatcatgttctctgaataatgctcaa
ttaatgactctagtcctaaattcctttataaataaaaattagaaaacatt
tataactcagaaagttccctaagtccttcttaagtatttattcatgactt
tagaaacagtatattattataatatattctgttgttagaacaatgcttcc
tcttatgttgaagaggtcatagagtcataagtatatatagaaatgtatta
tcacagacctagcactcactgaggtagaccagatagcagtgtgcagctga
ttgtgtaaaactaacaaattaaaagcacacacttttcttttcttttttat
tccattttttattaggtatttagctcatttacatttccaatgctatacca
aaagtcccccatacccacccacccccaatcccctacccacccactccccc
tttttggccatggcattcccctgtactggggcatataaagtttgcgtgtc
ccatgggcctctctttccagtgatggccgactaggccatcttttgataca
tatgcagctagagtcaagagctccggggtactggttagtccataatgttt
tttccgcctatagagttgcagatccctttaagctcctgggctactttctc
tagctcctccattgggagccctgtgatcatccaatagctgactggtgagc
atctccttctgggttggctagtgcctggcatgtctcaacagaagacagct
actatggatccttcaataaatcttgctaggtatgccatgtgtcacgttgt
atgcggattatgggggattcctggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr14_78321459_78321821
seq2: B6Ng01-255P14.b_645_1046

seq1  GTGTGCGCGTGCGTGTGCGTGTGTGTGTGTGTGTGTGGGGGGG---GGGT  47
        ||| ||||  ||||||||||||||||||||||||| | | |   | ||
seq2  --GTGTGCGT--GTGTGCGTGTGTGTGTGTGTGTGTGTGTGCGCACGTGT  46

seq1  GTGTGTGT-------------GTGAAGGGTAGCCGCATA-----------  73
      ||||||||             |  ||  |||     |||           
seq2  GTGTGTGTTGCTTCTTTCCCAGGAAAAAGTATTATAATAAATTCCTGTCT  96

seq1  --TTCTTCAATTGTTTCTCCACTATGT---GTTTTGAGAATGGGTCTAGA  118
        |||||  || |||||   |  ||||    |||| |  || | | || |
seq2  CTTTCTTTGATGGTTTC-ATATGATGTAAATTTTTCATTATTGTTGTACA  145

seq1  GCTGAACCTGG---GGCTCA-CTGAT-TGGCTAAGCTGGCTGCCCAGCAC  163
       ||   ||| |    || || || ||    |||   |   | |||    |
seq2  -CT---CCTTGAAATGCACACCTTATAAAACTATTTTAAATTCCCTATGC  191

seq1  TGATTGGCTAAACTGG--CTGCCCCCCTCCCCCCTCCCCA--AGCCCTAG  209
      |  |   || || | |  |||         |   ||   |  |   ||  
seq2  TAGTATACTGAAATAGTACTGTTTTAAGAACATTTCTAAATGAAGTCTGA  241

seq1  GGATCTGCTTGTCTCTACCTCCTCACACACTGGGGTTACCTCTCTGGACT  259
      | || |  |  | ||||  |  |    ||     || | || | |  | |
seq2  GAATATTATGCTTTCTAAATATTGCTTCA----TGTGATCTATTTAAATT  287

seq1  ----TTTTAC-ACAGATTCCTACGATCTGAATTCACATCCTGATGTTTGC  304
          || ||| | |||||  |  | | |||||    ||  | || |    
seq2  TTGGTTCTACTAAAGATT--TGGGGT-TGAAT----ATTATTATTT----  326

seq1  ACAGCAGACATTTGACTTCCTGAGCCTCCT--------CCC------AAG  340
          | | || | | ||| |||   ||| |        |||      || 
seq2  ----CTGGCACTGGTCTTGCTGTAACTCGTTATTTATCCCCTGATAAAAT  372

seq1  T-------CTCCCTTCCTCTTTAAAAATGG  363
      |       || | |||||||||||||||||
seq2  TATTTCCACTTCTTTCCTCTTTAAAAATGG  402


seq1: chr3_70920593_70921725
seq2: B6Ng01-255P14.g_68_1193

seq1  GAATTCCAGTGGACCCTAGGGATGCCAACAGTAACTCACATCTCAGTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTGGACCCTAGGGATGCCAACAGTAACTCACATCTCAGTAAT  50

seq1  TCCACAGGCTGTTTTCTGTTATCTGTTGCTTTATTCCATGCAGTGATCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAGGCTGTTTTCTGTTATCTGTTGCTTTATTCCATGCAGTGATCCC  100

seq1  AGCAGGTAGACCAAGCATGGTTTAGTATTGCTCTTCTACACTGTGACAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGTAGACCAAGCATGGTTTAGTATTGCTCTTCTACACTGTGACAGC  150

seq1  AAAAAAACACCCCAGTGTTTATGTGGTTCTTGGCCATTTTGTATAGAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAACACCCCAGTGTTTATGTGGTTCTTGGCCATTTTGTATAGAATG  200

seq1  TAAATAGCCCTGGTCAATGTTCCGACATTTCATTAAAATTTCAGCTTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAGCCCTGGTCAATGTTCCGACATTTCATTAAAATTTCAGCTTTTC  250

seq1  TCTTTGGTTTTGGGATGTCAAAATTATGCTATCCTCTTGTCAGTATTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGGTTTTGGGATGTCAAAATTATGCTATCCTCTTGTCAGTATTTCT  300

seq1  GTGTTATTTACTGAACAATATTTTAATCATGTTCTCTGAATAATGCTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTATTTACTGAACAATATTTTAATCATGTTCTCTGAATAATGCTCAA  350

seq1  TTAATGACTCTAGTCCTAAATTCCTTTATAAATAAAAATTAGAAAACATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGACTCTAGTCCTAAATTCCTTTATAAATAAAAATTAGAAAACATT  400

seq1  TATAACTCAGAAAGTTCCCTAAGTCCTTCTTAAGTATTTATTCATGACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACTCAGAAAGTTCCCTAAGTCCTTCTTAAGTATTTATTCATGACTT  450

seq1  TAGAAACAGTATATTATTATAATATATTCTGTTGTTAGAACAATGCTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAACAGTATATTATTATAATATATTCTGTTGTTAGAACAATGCTTCC  500

seq1  TCTTATGTTGAAGAGGTCATAGAGTCATAAGTATATATAGAAATGTATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATGTTGAAGAGGTCATAGAGTCATAAGTATATATAGAAATGTATTA  550

seq1  TCACAGACCTAGCACTCACTGAGGTAGACCAGATAGCAGTGTGCAGCTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGACCTAGCACTCACTGAGGTAGACCAGATAGCAGTGTGCAGCTGA  600

seq1  TTGTGTAAAACTAACAAATTAAAAGCACACACTTTTCTTTTCTTTTTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTAAAACTAACAAATTAAAAGCACACACTTTTCTTTTCTTTTTTAT  650

seq1  TCCATTTTTTATTAGGTATTTAGCTCATTTACATTTCCAATGCTATACCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTTTTTATTAGGTATTTAGCTCATTTACATTTCCAATGCTATACCA  700

seq1  AAAGTCCCCCATACCCACCCACCCCCAATCCCCTACCCACCCACTCCCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCCCCCATACCCACCCACCCCCAATCCCCTACCCACCCACTCCCCC  750

seq1  TTTTTGGCCATGGCATTCCCCTGTACTGGGGCATATAAAGTTTGCGTGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGCCATGGCATTCCCCTGTACTGGGGCATATAAAGTTTGCGTGTC  800

seq1  CAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATACA  850
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATACA  850

seq1  TATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGTTCATAATG-TT  899
      ||||||||||||||||||||||||||||||||||||||| ||||||| ||
seq2  TATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGTCCATAATGTTT  900

seq1  TTTCCGCCTATAGAGTTGCAGATCCCTTT-AGCTCCTTGGCTACTTTCTC  948
      ||||||||||||||||||||||||||||| ||||||| ||||||||||||
seq2  TTTCCGCCTATAGAGTTGCAGATCCCTTTAAGCTCCTGGGCTACTTTCTC  950

seq1  TAGCTCCTCCATTGGGAGCCCTGTGATCCATCCATTAGCTGACT-GTGAG  997
      ||||||||||||||||||||||||||| |||||| ||||||||| |||||
seq2  TAGCTCCTCCATTGGGAGCCCTGTGAT-CATCCAATAGCTGACTGGTGAG  999

seq1  CATCCACTTCTGGGTTTGCTAGTCCCTGGCATAGTCTC-ACAAGAGACAG  1046
      ||||  |||||||||| |||||| |||||||| ||||| |||  ||||||
seq2  CATCTCCTTCTGGGTTGGCTAGTGCCTGGCAT-GTCTCAACAGAAGACAG  1048

seq1  CTACATATGGGTCCTTTCAATAAAATCTTGCTAGTGTATGCAATGGTGTC  1096
      |||| ||||| ||| |||||| |||||||||||| |||||| || |||||
seq2  CTAC-TATGGATCC-TTCAAT-AAATCTTGCTAG-GTATGCCAT-GTGTC  1093

seq1  AGCGTTTGGATGCGGATTATGGGGTGGATCCCTGGAT  1133
      | || ||| ||||||||||||||  |||| |||||||
seq2  A-CG-TTGTATGCGGATTATGGG--GGATTCCTGGAT  1126


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