BAC Information

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BAC

Clone NameB6Ng01-256B02
Chromosome3 (Build37)
Map Location 13,126,395 - 13,127,519
singlet/doubletsinglet
Overlap genenone
Upstream geneEG621965, LOC100039798, EG668033, LOC668037
Downstream geneLOC100039823, LOC100039861, 0710005M24Rik, LOC100041679, LOC100041667, LOC100039882
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256B02.bB6Ng01-256B02.g
ACCGA062120GA062121
length1,1991,123
definitionB6Ng01-256B02.b B6Ng01-256B02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcaattctgagccccattttttaatggggttatttgatt
ttctggcgtccaccctcttcagttctttatatatattggatattagtctc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacagtatcttttgccttgcagaaggtttgcattttca
tgaggtcccatttgtcaatcctcgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtgcccatatcttcgaggcttttccccac
tctctcctctataagtttcagtgtctctagttttatgtgaagttccttga
tccccttagatttgaccttagtacaaggagataggaatggatcaattcgt
attcttctacatgataacaaccagttgtgccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgttgaagatcaagt
ggccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctgcttgtctgtcactataccttgcagtttttatcacaattgctctgta
gtaaagctttatgtcagggatgatgattccaccagaggttcttttatcct
tgagaagagtttttgcaatcctaggttttttgttattccagatgaatttg
cagattgctctttctaatttgttgaaaaattgagttggaattttgatggg
gattgcattgaatctgtagatttcttttagcaagatagccatttttataa
tgttgatcctgccaatccatgaacatgggagatcattccatcttctgaga
tcttctttaattttctttcttcataggctttgaagttcttatcatacaga
tctttcactttcctttagttagagtcacaccaagattttttgatattatt
tgtgactattgaagaaagtgttgtttgtttccctaatttctttctcagct
tgtttaattcttttgttgtagagaaaaggcccattgacttgtttgaagtt
aattcattatcctgctactcacctaaggcatttttatcagttttaaggag
tttcttctggtggcatttttccggttcacttaatattattctattcaaat
tgtcttaggaaaaagtgaatattctggactcctcatttccccaaaactg
gaattcagctcgggaaaagggtgaggagcctgtgaacctgcaccacatga
ctgtgggcaatccatatagataatgcctgtgagaaccttaaccacaagga
aattctccttaacagatatgtctcttgtaatgcaagtgaaaaaaaaagtt
tgccaaaaaaaaaaaaaaaaaaaaaacacacagattcaacagtttctgaa
aggaactatttgttacatggaaggggaatagtaataggaactgtgaaggt
tagtgctgagatcctgagaccatgtcatcattgtttatactagcagtcta
ccaagagtaaatcttagacaaattatttgagtctgtatatgacgctcagt
ccctgcagtaatctagctatgattaatttatgcagctactcaggtccatt
tcctattaatagtgtgtttatcatatagctgtatttaatggcttagcttt
ttatctgatttataaacacatttagtatgttttgccaatgcgagttttaa
cacatttaataaaatgctctataaactttattattaatgtgcaaattcca
tagataactgagtagataatacattcatatctaggtcatattttaaacaa
tttacaatgatttttaatgtgttatttagttgcctttggaatatggaatg
aagggttggataggagggagcctacagctgcttcaaagtttcctttgaga
tacatagtttaaaatagatctgcatgtacattgttggatcattcttttct
gtggaataaaacctatgaacagaaagaaattttgtcatgttccctcataa
catctgaaaacatagttctgttctggtgaactgaattgtgctgtattaaa
catcaatgttcttttcttatcatgtgtttgtgtgagaaagacttcacata
cacaagaatccatgcatgtgtgcctgttatatggaactccaccacatgtc
agcaatagacacatgtagctgctcatgagccatacctgactgtctgtgct
gggatgccaatagttattttgttttacactgcagtactcttgtagccagg
ccacaaagttactgaagaatttagtatattgaccaagcaactctacactt
tctacttactaccctccacagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_13126395_13127519
seq2: B6Ng01-256B02.g_66_1188

seq1  GAATTCAGCTCGGGAAAAGGGTGAGGAGCCTGTGAACCTGCACCACATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTCGGGAAAAGGGTGAGGAGCCTGTGAACCTGCACCACATGA  50

seq1  CTGTGGGCAATCCATATAGATAATGCCTGTGAGAACCTTAACCACAAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGGCAATCCATATAGATAATGCCTGTGAGAACCTTAACCACAAGGA  100

seq1  AATTCTCCTTAACAGATATGTCTCTTGTAATGCAAGTGAAAAAAAAAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTCCTTAACAGATATGTCTCTTGTAATGCAAGTGAAAAAAAAAGTT  150

seq1  TGCCAAAAAAAAAAAAAAAAAAAAAACACACAGATTCAACAGTTTCTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAAAAAAAAAAAAAAAAAAAAACACACAGATTCAACAGTTTCTGAA  200

seq1  AGGAACTATTTGTTACATGGAAGGGGAATAGTAATAGGAACTGTGAAGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACTATTTGTTACATGGAAGGGGAATAGTAATAGGAACTGTGAAGGT  250

seq1  TAGTGCTGAGATCCTGAGACCATGTCATCATTGTTTATACTAGCAGTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGCTGAGATCCTGAGACCATGTCATCATTGTTTATACTAGCAGTCTA  300

seq1  CCAAGAGTAAATCTTAGACAAATTATTTGAGTCTGTATATGACGCTCAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAGTAAATCTTAGACAAATTATTTGAGTCTGTATATGACGCTCAGT  350

seq1  CCCTGCAGTAATCTAGCTATGATTAATTTATGCAGCTACTCAGGTCCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCAGTAATCTAGCTATGATTAATTTATGCAGCTACTCAGGTCCATT  400

seq1  TCCTATTAATAGTGTGTTTATCATATAGCTGTATTTAATGGCTTAGCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATTAATAGTGTGTTTATCATATAGCTGTATTTAATGGCTTAGCTTT  450

seq1  TTATCTGATTTATAAACACATTTAGTATGTTTTGCCAATGCGAGTTTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTGATTTATAAACACATTTAGTATGTTTTGCCAATGCGAGTTTTAA  500

seq1  CACATTTAATAAAATGCTCTATAAACTTTATTATTAATGTGCAAATTCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTAATAAAATGCTCTATAAACTTTATTATTAATGTGCAAATTCCA  550

seq1  TAGATAACTGAGTAGATAATACATTCATATCTAGGTCATATTTTAAACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAACTGAGTAGATAATACATTCATATCTAGGTCATATTTTAAACAA  600

seq1  TTTACAATGATTTTTAATGTGTTATTTAGTTGCCTTTGGAATATGGAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAATGATTTTTAATGTGTTATTTAGTTGCCTTTGGAATATGGAATG  650

seq1  AAGGGTTGGATAGGAGGGAGCCTACAGCTGCTTCAAAGTTTCCTTTGAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTTGGATAGGAGGGAGCCTACAGCTGCTTCAAAGTTTCCTTTGAGA  700

seq1  TACATAGTTTAAAATAGATCTGCATGTACATTGTTGGATCATTCTTTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAGTTTAAAATAGATCTGCATGTACATTGTTGGATCATTCTTTTCT  750

seq1  GTGGAATAAAACCTATGAACAGAAAGAAATTTTGTCATGTTCCCTCATAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAATAAAACCTATGAACAGAAAGAAATTTTGTCATGTTCCCTCATAA  800

seq1  CATCTGAAAACATAGTTCTGTTCTGGTGAACTGAATTGTGCTGTATTAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGAAAACATAGTTCTGTTCTGGTGAACTGAATTGTGCTGTATTAAA  850

seq1  CATCAATGTTCTTTTCTTATCATGTGTTTGTGTGAGAAAGACTTCACATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAATGTTCTTTTCTTATCATGTGTTTGTGTGAGAAAGACTTCACATA  900

seq1  CACAAGAATCCATGCATGTGTGCCTGTTATATGGAACT-CACCACATGTC  949
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CACAAGAATCCATGCATGTGTGCCTGTTATATGGAACTCCACCACATGTC  950

seq1  AGCAATAGACACATGTAGCCTGGCTCATGAGCCATACCTGACTGTCTGTG  999
      |||||||||||||||||||   ||||||||||||||||||||||||||||
seq2  AGCAATAGACACATGTAGC--TGCTCATGAGCCATACCTGACTGTCTGTG  998

seq1  CTGGGATGCCCAATAG-TATTTGTTTTAACACTGCAGTACTCTGTTAGCC  1048
      |||||||| ||||||| |||||  ||| |||||||||||||||  |||||
seq2  CTGGGATG-CCAATAGTTATTTTGTTTTACACTGCAGTACTCTTGTAGCC  1047

seq1  A-GCCACAAAAGTACTGAGAGATTTAGTATAATGACC-AGCAACTCTACA  1096
      | ||||||||  ||||||   |||||||||| ||||| ||||||||||| 
seq2  AGGCCACAAAGTTACTGAAGAATTTAGTATATTGACCAAGCAACTCTAC-  1096

seq1  ACTTTCTAACCTTACTACCTCCCACAGAG  1125
      ||||||||  |||||||||  ||||||||
seq2  ACTTTCTA--CTTACTACCCTCCACAGAG  1123