BAC Information

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BAC

Clone NameB6Ng01-256E19
Chromosome3 (Build37)
Map Location 119,187,611 - 119,188,716
singlet/doubletsinglet
Overlap genenone
Upstream geneDpyd
Downstream geneLOC100043275, LOC100043278, Ptbp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256E19.bB6Ng01-256E19.g
ACCGA062294GA062295
length1,0991,143
definitionB6Ng01-256E19.b B6Ng01-256E19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctagacaagaaaagaaaagaaaggaaaagagagatatagaaaaac
tagaaaagatttcacatacttattatgggagttccagaagaagaagaaga
agaagacagggataggagtagagaaataagtgacaaaattaagattgtat
tttcgtcagattattgacaaatactcactgataatgacatctcatagaat
gcaaagcagcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagaaaagaaa
gaaagaaagaaagaaaagaaaccataaaacaacccaaacacagtaatcca
ctaaaaatggacttgtaactgctatacttcatagattcaaacgtaaagag
aagcaggaaccatggtgtgttgtgagtagaggagatggtcttaactttac
aacagtgaacctaaggatgacacctgatctctccacagaaactacagcag
ggaaagggaatagaagggaatgaaatattaaaagctttgaggaaataatg
aacccccagacaaaataaaacagatcagtaggaatgctgtactccatatc
aaaagtgaaggaaatggaaagaggaagacattgctgaccattcagttgaa
aaaataactaatatacaagtatacaaggtgactcaaattcttagcaaaat
cagtgacttgaatagatacttgccaaccgaagaattctcatggccaaaaa
ccaagagaaaaaaatcttggcttcataaaccattgagagaaaaatcaata
aaatgattcctaatgttattctgctgtacttatagattctagtccagtca
tcatcagagatgtttcttctggcagctgatggggacacatgcagagtccc
acagccaaatattagttggagaggagagaaagagagtaagttggggattt
ctatctgttcccttcccttggagctttgggaatcccatgaggaggcaaga
agagaattgtagggtcagattgttgagacaccatgggacatgtccacaga
atcagtcaggatcataggatccacagagactgcattagcaaccaagagct
gcagtctgcactagttctcaggctatggtatacttgctagataggtgtt
gaattcctctggtacatgtgtgctgagggccatgggccagcccatgcatg
ctctttggttggtggcttagtctctgtgagctcccaggggtctcagtctt
ctgatggggtttccatcccttttagctccttcaatcctttcccctaactc
ttccatagggatccctatcctaagtccaatggttgtctgtaagtatctgc
atctgtctcaatcagctgcaggtagagcctctcagaggaaaaccatgcta
ggctccagtctgcaagcacaacatggcatcgataataatgtcagggtttg
gtgcccacccatgggatagatccaagtcaggcccatcactggatgacttt
tcctttaatctctgctgctccattttgtcccttcatttcttttaaacagg
aacaattctgggtcaaattttttgaaggtaggttggtgaccccatccatt
cactaggggctatgtctaactactgaatgttgactcttcagggacaattt
cccactactggccatttcggctaaggccatcctcattgagtcctgggagc
ctctcacacgccagatctctgggactttctagtggtttctccctacccta
ccccatcccacttctgcctactaccttccatggcttcaaatttccaatca
ttctcatggtcttctgggcttctttcctgtctctcccaaacctagtcctg
ccctctttttccttccccctcccctcccccagttaggtcccttcatccct
ctggctcctgtgattatttgtgaatattttgatcctccttctaggtagga
ttgaagcatcatcacatgggccttcctacttgttaaacttcttagggttg
tatcatgggtattttgtaatttttggctaatagacactcatgaaaatggg
atggaactagaaaataccatcttgactgaggtaacccagaccctaaagta
cagagtagagatgtatgtactcacagattccttatattttattatgtgta
tgagtgtgtctgtcacatgatcagtcacgtctatctggagctgagtacag
tagccctgactacttgattggagtgcctggagagcctgactagtcctggt
cagagttagttgtgctcttaaaccacctgtgagcccaactgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_119187611_119188716
seq2: B6Ng01-256E19.b_54_1144 (reverse)

seq1  AACACCTATCTAGCAAGTATAACATAGGCTGAGGACCTAGTGCAGACCCT  50
      ||||||||||||||||||||| ||||| |||| || |||||||||||   
seq2  AACACCTATCTAGCAAGTATACCATAGCCTGA-GAACTAGTGCAGAC---  46

seq1  TGCAGGCTCTGTGGTTGCTAATGCAGTCTCTGTGAATCCTTATGATCCCT  100
      |||| ||||| ||||||||||||||||||||||| |||| |||||| |||
seq2  TGCA-GCTCT-TGGTTGCTAATGCAGTCTCTGTGGATCC-TATGAT-CCT  92

seq1  GACTGATTCTGTGGACCATGTTCCCATGGTGTCCTCAACAATTCTGACCC  150
      ||||||||||||||| |||| ||||||||||| |||||||| ||||| ||
seq2  GACTGATTCTGTGGA-CATG-TCCCATGGTGT-CTCAACAA-TCTGA-CC  137

seq1  CTACAATTCTTCTTCCTGCCTCCCTCATGGGATTCCCAAAGCTCCAAGGG  200
      ||||||||| ||||| ||||| ||||||||||||||||||||||||||||
seq2  CTACAATTC-TCTTCTTGCCT-CCTCATGGGATTCCCAAAGCTCCAAGGG  185

seq1  AAGGGAACAGATAGAAATCCCCAACTTACTCTCTTTCTCTCCTCTCCAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAACAGATAGAAATCCCCAACTTACTCTCTTTCTCTCCTCTCCAAC  235

seq1  TAATATTTGGCTGTGGGACTCTGCATGTGTCCCCATCAGCTGCCAGAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTTGGCTGTGGGACTCTGCATGTGTCCCCATCAGCTGCCAGAAGA  285

seq1  AACATCTCTGATGATGACTGGACTAGAATCTATAAGTACAGCAGAATAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCTCTGATGATGACTGGACTAGAATCTATAAGTACAGCAGAATAAC  335

seq1  ATTAGGAATCATTTTATTGATTTTTCTCTCAATGGTTTATGAAGCCAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGAATCATTTTATTGATTTTTCTCTCAATGGTTTATGAAGCCAAGA  385

seq1  TTTTTTTCTCTTGGTTTTTGGCCATGAGAATTCTTCGGTTGGCAAGTATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCTCTTGGTTTTTGGCCATGAGAATTCTTCGGTTGGCAAGTATC  435

seq1  TATTCAAGTCACTGATTTTGCTAAGAATTTGAGTCACCTTGTATACTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAAGTCACTGATTTTGCTAAGAATTTGAGTCACCTTGTATACTTGT  485

seq1  ATATTAGTTATTTTTTCAACTGAATGGTCAGCAATGTCTTCCTCTTTCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAGTTATTTTTTCAACTGAATGGTCAGCAATGTCTTCCTCTTTCCA  535

seq1  TTTCCTTCACTTTTGATATGGAGTACAGCATTCCTACTGATCTGTTTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTCACTTTTGATATGGAGTACAGCATTCCTACTGATCTGTTTTAT  585

seq1  TTTGTCTGGGGGTTCATTATTTCCTCAAAGCTTTTAATATTTCATTCCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTGGGGGTTCATTATTTCCTCAAAGCTTTTAATATTTCATTCCCT  635

seq1  TCTATTCCCTTTCCCTGCTGTAGTTTCTGTGGAGAGATCAGGTGTCATCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTCCCTTTCCCTGCTGTAGTTTCTGTGGAGAGATCAGGTGTCATCC  685

seq1  TTAGGTTCACTGTTGTAAAGTTAAGACCATCTCCTCTACTCACAACACAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTTCACTGTTGTAAAGTTAAGACCATCTCCTCTACTCACAACACAC  735

seq1  CATGGTTCCTGCTTCTCTTTACGTTTGAATCTATGAAGTATAGCAGTTAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTTCCTGCTTCTCTTTACGTTTGAATCTATGAAGTATAGCAGTTAC  785

seq1  AAGTCCATTTTTAGTGGATTACTGTGTTTGGGTTGTTTTATGGTTTCTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCATTTTTAGTGGATTACTGTGTTTGGGTTGTTTTATGGTTTCTTT  835

seq1  TCTTTCTTTCTTTCTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTTCTTTCTTTCTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTT  885

seq1  TTTTGCTGCTTTGCATTCTATGAGATGTCATTATCAGTGAGTATTTGTCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTGCTTTGCATTCTATGAGATGTCATTATCAGTGAGTATTTGTCA  935

seq1  ATAATCTGACGAAAATACAATCTTAATTTTGTCACTTATTTCTCTACTCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCTGACGAAAATACAATCTTAATTTTGTCACTTATTTCTCTACTCC  985

seq1  TATCCCTGTCTTCTTCTTCTTCTTCTTCTGGAACTCCCATAATAAGTATG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCTGTCTTCTTCTTCTTCTTCTTCTGGAACTCCCATAATAAGTATG  1035

seq1  TGAAATCTTTTCTAGTTTTTCTATATCTCTCTTTTCCTTTCTTTTCTTTT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATCTTTTCTAGTTTTTCTATATCTCTCTTTTCCTTTCTTTTCTTTT  1085

seq1  CTTGTC  1106
      ||||||
seq2  CTTGTC  1091