BAC Information

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BAC

Clone NameB6Ng01-256I03
Chromosome3 (Build37)
Map Location 78,724,365 - 78,725,427
singlet/doubletsinglet
Overlap genenone
Upstream geneEG626461, LOC667526, LOC626479, LOC100041691, LOC383883, LOC100041748
Downstream geneLOC100041716, LOC100041725, LOC100041766, Rapgef2, LOC100041741, LOC100041793, LOC667613, Ppid, Etfdh, 4930579G24Rik, Rxfp1, Tmem144, 1110032E23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256I03.bB6Ng01-256I03.g
ACCGA062449GA062450
length1,0651,155
definitionB6Ng01-256I03.b B6Ng01-256I03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgtatactcaggctttaagagaaaatacacagataaggagaaa
gaatgcaatgcaattagtttatcgcaagggtcgaggtattacaagaacta
tgtccagttgaaagactttgcaaggggaagatgcatctcagaatgtaaaa
aaggacagttgtgatatgactttaaatggataaggctgagagtttactgt
tatccaacagcccaattttcaaaacccaggcaaggtcttcactattaagc
aattcacggagacccctttcaaaagcccaggatattgtattcagtttgag
gcatttcactgctaggaagatgaaggcaaacagagatgggaattcagagt
tgaaaaatacacatactcaaaaaaatatttcagggtctagggaggattgg
cttttcaagggaaagtatgaataaatagaataaataatagcttggttcac
aacatctaaagagagggagataattcaataaatgccttaaatttaactgt
aaaattacaaagtagccggtgctgtctcattctgcctcatttaaatttta
ccaacttttcagtgatcagggtgcttcctcagttcatataaaggtacagg
cattatctattggtattttctgtatacgaaacattttgaaagcatatata
cagcgcagtccttttctttccttcctctgtattctttctatgttatcact
gtggatttttttctctatactggcaattgaacccaaggctttgcacatgc
tttcagatatctctgtcagtgagccatatcccagccctcatttcagagat
atttgaaactgtaccttccacagtgtctcctaaagacttccactgcttgg
ctgaacccaaggctgccaatcctgcattgctaaagccaacggctgtaaaa
tcctcagagatacccatcgtggtctttcccaagtctcacttttgcttgtg
tgagctactgaggggagcagtggttggaggagagactgtagttttgtctt
atacaattgggatcatggatgcgacatgggtggaactcagcaaagaaaac
agaattaaattattt
gaattcaaaagcagcaagggaaagggccaggtaagatataaaggcagacc
tataggaattacacccgatttctcacctgagactttaaaagctagaaggg
catgggcagactctaagagaccacagatgtcattccagactgttataccc
agtaaaactttcaatcagcatggatggagaaaccaagatattccatagca
aagccaaatttaaacaaaacctttccatgaactggaccctacagagctta
cttgaaggaaacttaagaaaacacaaagaataaataatttcacactttta
aaaccaatagaagagagagaaacacacactagcaacatcaaaataacagg
aagtaacaatcattggtcattaatatttcacaacattaatggactcaatt
ctccaataaaaagactcaacagagtggctgcataacagaatctaccattc
tgctgtatagaagagatatttctcagcaacaaagatagtcaccacctcag
tataaaaggctgtcaaaaaaggtttcccaagcaaaaggaccaaagaaacg
ggttgaagtagccattctaatagcaaataaaatagacttccaactgaaag
taatcaagaaagatagacaaggatacttcatacacatcaaaggaaaaaat
gcacatctcagttctgaacatctaagtcccaaatgcaagggcacacacat
ttgtaaaagaaacactactaaagtaaatgacacatcgatcccccacacat
taatagtggaagacctcaacaccatatgctcaccaatagacaggtcatca
aaatataaactaaacagagaaataatactcctgcctacgtgatgtgctgg
gataatggaggctcagaacttgtggagtgtccaacccatgactgggtcta
atttgagacccgcaccatgagagagagcccatgctcaccagtgcctggat
gaccaggacagaaacttgatagtccagaaacctagatctagatgggggag
agggcagaaaaatcaataaatgatcttaagatagtctctactcatagatg
tgctaggccagtcattcctcagaagagaccttccactgaacggctatggg
cacgatgaggatctagccaaataatggccagaggataaactgaaaaaagg
ggcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_78724365_78725427
seq2: B6Ng01-256I03.b_44_1108 (reverse)

seq1  AAATAATTT-ATTCTGTTTTCTTTGCTGAGTTCCACCCATGTCGCATCCA  49
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATTTAATTCTGTTTTCTTTGCTGAGTTCCACCCATGTCGCATCCA  50

seq1  TGATCCCAATTGTAT-AGACAAAACTACAGTCTCTCCTCC-ACCACTGCT  97
      ||||||||||||||| |||||||||||||||||||||||| |||||||||
seq2  TGATCCCAATTGTATAAGACAAAACTACAGTCTCTCCTCCAACCACTGCT  100

seq1  CCCCTCAGTAGCTCACAACAAGCAAAAGTGAGACTTGGGAAAGACCACGA  147
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CCCCTCAGTAGCTCAC-ACAAGCAAAAGTGAGACTTGGGAAAGACCACGA  149

seq1  TGGGTATCTCTGAGGATTTTACAGCCGTTGGCTTTAGCAATGCAGGATTG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTATCTCTGAGGATTTTACAGCCGTTGGCTTTAGCAATGCAGGATTG  199

seq1  GCAGCCTTGGGTTCAGCCAAGCAGTGGAAGTCTTTAGGAGACACTGTGGA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCTTGGGTTCAGCCAAGCAGTGGAAGTCTTTAGGAGACACTGTGGA  249

seq1  AGGTACAGTTTCAAATATCTCTGAAATGAGGGCTGGGATATGGCTCACTG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACAGTTTCAAATATCTCTGAAATGAGGGCTGGGATATGGCTCACTG  299

seq1  ACAGAGATATCTGAAAGCATGTGCAAAGCCTTGGGTTCAATTGCCAGTAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGATATCTGAAAGCATGTGCAAAGCCTTGGGTTCAATTGCCAGTAT  349

seq1  AGAGAAAAAAATCCACAGTGATAACATAGAAAGAATACAGAGGAAGGAAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAAAAATCCACAGTGATAACATAGAAAGAATACAGAGGAAGGAAA  399

seq1  GAAAAGGACTGCGCTGTATATATGCTTTCAAAATGTTTCGTATACAGAAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGACTGCGCTGTATATATGCTTTCAAAATGTTTCGTATACAGAAA  449

seq1  ATACCAATAGATAATGCCTGTACCTTTATATGAACTGAGGAAGCACCCTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAATAGATAATGCCTGTACCTTTATATGAACTGAGGAAGCACCCTG  499

seq1  ATCACTGAAAAGTTGGTAAAATTTAAATGAGGCAGAATGAGACAGCACCG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTGAAAAGTTGGTAAAATTTAAATGAGGCAGAATGAGACAGCACCG  549

seq1  GCTACTTTGTAATTTTACAGTTAAATTTAAGGCATTTATTGAATTATCTC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTTTGTAATTTTACAGTTAAATTTAAGGCATTTATTGAATTATCTC  599

seq1  CCTCTCTTTAGATGTTGTGAACCAAGCTATTATTTATTCTATTTATTCAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTTTAGATGTTGTGAACCAAGCTATTATTTATTCTATTTATTCAT  649

seq1  ACTTTCCCTTGAAAAGCCAATCCTCCCTAGACCCTGAAATATTTTTTTGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCCCTTGAAAAGCCAATCCTCCCTAGACCCTGAAATATTTTTTTGA  699

seq1  GTATGTGTATTTTTCAACTCTGAATTCCCATCTCTGTTTGCCTTCATCTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTGTATTTTTCAACTCTGAATTCCCATCTCTGTTTGCCTTCATCTT  749

seq1  CCTAGCAGTGAAATGCCTCAAACTGAATACAATATCCTGGGCTTTTGAAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCAGTGAAATGCCTCAAACTGAATACAATATCCTGGGCTTTTGAAA  799

seq1  GGGGTCTCCGTGAATTGCTTAATAGTGAAGACCTTGCCTGGGTTTTGAAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCTCCGTGAATTGCTTAATAGTGAAGACCTTGCCTGGGTTTTGAAA  849

seq1  ATTGGGCTGTTGGATAACAGTAAACTCTCAGCCTTATCCATTTAAAGTCA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGCTGTTGGATAACAGTAAACTCTCAGCCTTATCCATTTAAAGTCA  899

seq1  TATCACAACTGTCCTTTTTTACATTCTGAGATGCATCTTCCCCTTGCAAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACAACTGTCCTTTTTTACATTCTGAGATGCATCTTCCCCTTGCAAA  949

seq1  GTCTTTCAACTGGACATAGTTCTTGTAATACCTCGACCCTTGCGATAAAC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTCAACTGGACATAGTTCTTGTAATACCTCGACCCTTGCGATAAAC  999

seq1  TAATTGCATTGCATTCTTTCTCCTTATCTGTGTATTTTCTCTTAAAGCCT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGCATTGCATTCTTTCTCCTTATCTGTGTATTTTCTCTTAAAGCCT  1049

seq1  GAGTATACATGAATTC  1063
      ||||||||||||||||
seq2  GAGTATACATGAATTC  1065