BAC Information

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BAC

Clone NameB6Ng01-256N07
Chromosome3 (Build37)
Map Location 150,606,760 - 150,607,917
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040633, LOC100040455, LOC100040463, LOC623554
Downstream geneEltd1, Ifi44, H28, Ptgfr
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256N07.bB6Ng01-256N07.g
ACCGA062689GA062690
length1,1671,144
definitionB6Ng01-256N07.b B6Ng01-256N07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatcatatgtacttgatatttttcaaaaatttcattttaattat
tgaccaataacacagcattgcactactgtatgaacatcaatgagagaaaa
acattctttttgtctttatatcacttacctaagaacctttgaaaagtttt
tctccactcactgacatagatttaagatcttcttggatttatagaaacta
tcatcataaaacttttatttaattgtatttttattaagcaaaactaatct
aatccaaaattcaagaatttataactagacaatatagctttatttttaat
aaaaaaggaaatcaagttttgtgccataaaccaacccctttattctatga
tattaatgagagattttatgaggagagacatctcactgctcctgtttctg
ggctacggggaaacgcagtgaagttctccctccgtccattttagatattt
gattttctgcaatttagcatctacaaaaatgacctgaactataagaggtt
atgtacaataaagttacccaaatgcttagaaattaaggattttgaaatca
agatgactatcttttgcagatagcatcagcaactaaattcaaggctaagt
aaaccacctacgtgaaccaagcacagcaagcaacacgtgtgactaatatc
tggcttggttgtaattcagagcaagctgacatcatgttcattgagctgat
tttttgcataatggttttaccttccaaaagttgttattcttctagggcat
ttatcatgtgctgagctcaatatatgtctcttgttattactgtttctctt
taccattgcaaatgacacacactggactcctgttttacaaactcattttc
cttttaaaagatctctactttcaaattctcctgtttacaagcaactgaac
ggttttagagccagtgcttgacgttggtattatttatggtgtataagatg
catagtatttctttgatttttgatagctgacctcaaagtaaattgctttc
atctgttgatatccaccagaaatcactagaacataatctgctcagtgtgt
acatactaaggacactgcaggctttggcagcccaccgtgtcctcaaatat
tttgttgagccccctctgtgaccctgtatgtcttgccagaccccaaggag
gacaacaggcatacaaa
gaattccatgagtgttcttttgtgcctgggttacctcacttggcaatatt
ttctagttccatccattggcctaagaatttcataaattcattctttttaa
ttgctgagtagtactccattgtgtaaatgtcccacatattctgtatccat
tcctctgttgtggacatctaggttctttccagcttctggctattataaat
aaggcttctatgaacacagtgggagcatgtatcttattatgtgttgcagc
accttctgggtatacgtccaggagtggtattgctgggtactttggtagta
taatgtccaatttctgaggaaataccagactgatttccagaatggttgta
ccaacttgcaatcctaccatcaatggaggagtgttcctctttctcaccag
catctgatgtcatctcaatttttgatcttagccattctgagtgatgtgac
atggaatctaagggttgttttgacttgcatttccatgatgactaagatgt
tgagcattgttttaggtgcttctcagccattctgtattcttcagttgaaa
attatttgtttagctctgtaccccatttttagtaggtttatttggttctc
tggagtctaacttcttgagttgtatgtatatattagatattagccctcta
ttggatgtagggtttgtaaagatcttttcccaaacttttggttgctgttt
tgtcatattgatagtgtcctttgccttacgggagctttgcaattttatga
ggtcccatttgtcaattcctcatcttatagcataagctattggtattctg
ttcaggaaattttcctctgtgcccatgtcctcaaggctcttccccacttt
cttttctattagtttcagtgtatctgggtttatgtgagggtcattgatcc
acttggacttgagctttgaatagagataagatgggtgattgcctttctct
tacatgacaagccaccatttgtgaaaatgctgtcttttttcactggatgt
tttagctcttgtcaagtcagtgacatagtgtgtggttcaatatctgtgtt
ctccaattcagttccataagctgaactgaccgatcacgttaaccatgcat
gccagcttgcaaccaattggctctgtaagtatcacgctgtgaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_150606760_150607917
seq2: B6Ng01-256N07.b_48_1214

seq1  GAATTCAATCATATGTACTTGATATTTTTCAAAAATTTCATTTTAATTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCATATGTACTTGATATTTTTCAAAAATTTCATTTTAATTAT  50

seq1  TGACCAATAACACAGCATTGCACTACTGTATGAACATCAATGAGAGAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAATAACACAGCATTGCACTACTGTATGAACATCAATGAGAGAAAA  100

seq1  ACATTCTTTTTGTCTTTATATCACTTACCTAAGAACCTTTGAAAAGTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCTTTTTGTCTTTATATCACTTACCTAAGAACCTTTGAAAAGTTTT  150

seq1  TCTCCACTCACTGACATAGATTTAAGATCTTCTTGGATTTATAGAAACTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCACTCACTGACATAGATTTAAGATCTTCTTGGATTTATAGAAACTA  200

seq1  TCATCATAAAACTTTTATTTAATTGTATTTTTATTAAGCAAAACTAATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCATAAAACTTTTATTTAATTGTATTTTTATTAAGCAAAACTAATCT  250

seq1  AATCCAAAATTCAAGAATTTATAACTAGACAATATAGCTTTATTTTTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAAAATTCAAGAATTTATAACTAGACAATATAGCTTTATTTTTAAT  300

seq1  AAAAAAGGAAATCAAGTTTTGTGCCATAAACCAACCCCTTTATTCTATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGGAAATCAAGTTTTGTGCCATAAACCAACCCCTTTATTCTATGA  350

seq1  TATTAATGAGAGATTTTATGAGGAGAGACATCTCACTGCTCCTGTTTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATGAGAGATTTTATGAGGAGAGACATCTCACTGCTCCTGTTTCTG  400

seq1  GGCTACGGGGAAACGCAGTGAAGTTCTCCCTCCGTCCATTTTAGATATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACGGGGAAACGCAGTGAAGTTCTCCCTCCGTCCATTTTAGATATTT  450

seq1  GATTTTCTGCAATTTAGCATCTACAAAAATGACCTGAACTATAAGAGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTCTGCAATTTAGCATCTACAAAAATGACCTGAACTATAAGAGGTT  500

seq1  ATGTACAATAAAGTTACCCAAATGCTTAGAAATTAAGGATTTTGAAATCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACAATAAAGTTACCCAAATGCTTAGAAATTAAGGATTTTGAAATCA  550

seq1  AGATGACTATCTTTTGCAGATAGCATCAGCAACTAAATTCAAGGCTAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGACTATCTTTTGCAGATAGCATCAGCAACTAAATTCAAGGCTAAGT  600

seq1  AAACCACCTACGTGAACCAAGCACAGCAAGCAACACGTGTGACTAATATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCACCTACGTGAACCAAGCACAGCAAGCAACACGTGTGACTAATATC  650

seq1  TGGCTTGGTTGTAATTCAGAGCAAGCTGACATCATGTTCATTGAGCTGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTGGTTGTAATTCAGAGCAAGCTGACATCATGTTCATTGAGCTGAT  700

seq1  TTTTTGCATAATGGTTTTACCTTCCAAAAGTTGTTATTCTTCTAGGGCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGCATAATGGTTTTACCTTCCAAAAGTTGTTATTCTTCTAGGGCAT  750

seq1  TTATCATGTGCTGAGCTCAATATATGTCTCTTGTTATTACTGTTTCTCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCATGTGCTGAGCTCAATATATGTCTCTTGTTATTACTGTTTCTCTT  800

seq1  TACCATTGCAAATGACACACACTGGACTCCTGTTTTACAAACTCATTTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATTGCAAATGACACACACTGGACTCCTGTTTTACAAACTCATTTTC  850

seq1  CTTTTAAAAGATCTCTACTTTCAAATTCTCCTGTTTACAAGCAACTGAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAAAAGATCTCTACTTTCAAATTCTCCTGTTTACAAGCAACTGAAC  900

seq1  GGTTTTAGAGCCAGTGCTTGACGTTGGTATTATTTATGGTGTATAAGATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTAGAGCCAGTGCTTGACGTTGGTATTATTTATGGTGTATAAGATG  950

seq1  CATAGTATTTCTTTGATTTTTGATAGCTGACCTCAAAGT-AATTGCTTTC  999
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CATAGTATTTCTTTGATTTTTGATAGCTGACCTCAAAGTAAATTGCTTTC  1000

seq1  ATCTGTTGATATCCACCAGAAATCACTAG-ACATAATCTGCTCAGTGTGT  1048
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ATCTGTTGATATCCACCAGAAATCACTAGAACATAATCTGCTCAGTGTGT  1050

seq1  ACAATACT-AGGACACTGCAAGCTTT-GCAG-CCACCGTGTCCTCAAATA  1095
      || ||||| ||||||||||| ||||| |||| ||||||||||||||||||
seq2  AC-ATACTAAGGACACTGCAGGCTTTGGCAGCCCACCGTGTCCTCAAATA  1099

seq1  -TTTGTTGAAGCCCCTCTGTGA-CCTGTATGTC-TGCCAGACACC-AGGA  1141
       ||||||||  ||||||||||| |||||||||| |||||||| || ||||
seq2  TTTTGTTGAGCCCCCTCTGTGACCCTGTATGTCTTGCCAGACCCCAAGGA  1149

seq1  AGACAACA-GCATACAAA  1158
       ||||||| |||||||||
seq2  GGACAACAGGCATACAAA  1167