BAC Information

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BAC

Clone NameB6Ng01-257E15
Chromosome3 (Build37)
Map Location 19,139,211 - 19,140,396
singlet/doubletsinglet
Overlap genePde7a
Upstream geneCyp7b1, LOC622921, LOC100040153, Armc1, Mtfr1
Downstream geneDnajc5b, EG620290, Trim55, Crh, LOC665002, LOC100039304, LOC100040237, 4632415L05Rik, Cp, Hps3, Hltf, Gyg, Cpa3, EG664965
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257E15.bB6Ng01-257E15.g
ACCGA063028GA063029
length1,0171,179
definitionB6Ng01-257E15.b B6Ng01-257E15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatactgaagggctgagaagcacttcaaaaaatg
ttcaacacacttaatcattagggaaatgcaaatcaaaacaaccctgagat
tctacctcacaccaatcagaatggctaagatcaaaaattcaggtgacagc
agatgctggtgagaatgtggagaaagaggaacactcctccattgctggtg
ggattgcaagctggtacaaccactctggaaatcagtctggctgttcctca
ggaaattggacatagtactacgggaagatccaacaatacttctcttgggc
atattcccagaagatcttccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacacagat
gtccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtgctgttcagctattaaaaacaatgaatttatgaaattcttaggcaa
atggatgtatctagagcatattatcctgagtgaggtaacccaatcacaaa
agaagtcacttgatatgcattcagtgatgaatggatattagcccagaaac
ttagaaaacccaagatacaatttgcaaaacaagaaaatcaagaagaagga
agaccaacgtgtggatacttcattcctccttagaacagggaacaaaatac
ccatggaaggagttacagagacaaagtttggagctaagatgaaaggatgg
actatccagagaataccctacccgggtatccatcccataatcagccacca
aaagcagacactattgcacatgccagcaagattttgctgaaagaaccctg
atataaccgtctcttgttaggctatgccagtgcctggcaaatacagaagt
ggatgctcacagtcatctattggatggaacacaggaccccaatggaggag
tggaggggtctgcaccctatagtggaacataatatgaactaccagtaccc
ccgagctcgtgtctcta
gaattcagtttttctgttgctagggacggagtaatgtgtcccctgcttga
ctttaaagttacctgcttttcttttcttctagaaatgtgtttatttatgg
aggtgtgtatgcacatgcccacaatacacatgtggaagccagaggatagc
atgctgttgtgggttctctttcctgtctatggattgcagggttccaactc
agtttgttgagcttgtagatacaagtaccttacccagtgaccgctgccac
cttccccagcactgctgtggttgtttgggtgtcactgttactttctcgag
aagggctctacctgccctgcttatctctgcactgcagacaggaagtagat
gagcctgaagggcaaggtggtggggaccttaaggtttgcctgtgtcggaa
cagcgccaggcatcactgctcttcccctgtcgctatcttttacccttggg
tgctttgtgtcctgttgctctctctgcctctcgctggctgcatctagcca
tggtgccctaacgaaaaggcaatttaccttcctctaggccttgtggggat
tgttctttctctttttctttcttttttttttaatacaagcagtgaattat
tagatgcccacctccttcaagatttgtgaaatttttcttttctaactcaa
cacaaacataacttcagttattatcataagataaatatagatgaaacaac
accagccataacatttttaaagactagccttatataaactgatagctcat
agtctattcttgggctgctaggatgcctgccattccttaatatagtttgc
tcttttctaaatttgatttttaaaaagtgcacaacctgttagtcagggtc
ttaggatgaaagctagtgagtgtgtctgtattctatgtcagccacagttg
cttttccgtagaccaccctgtttgaactggctttgtggagaaggtggccc
tattacctgggtcctagataaaccaccttattgttgcttacccacctttg
ctttttataggagcttactatagccccttggaaaccacagagattttcta
cttgagaatggtaattgacaattggcagaaaaaacttgtttcttcaactt
gcatatgtagttgaatggttccgtttggacctaataacattgattgtgtt
tacattccaaggatcatagaggcccctgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_19139211_19140396
seq2: B6Ng01-257E15.g_66_1244 (reverse)

seq1  GCAGGGGCAACTATGA-ACTTGGATATGGTAAACACAAATCATGTATAAT  49
      ||||||||  ||||||  |||||| || ||||||||||   ||||    |
seq2  GCAGGGGCCTCTATGATCCTTGGA-AT-GTAAACACAATCAATGT----T  44

seq1  TTTAGTTCTAAAAGGAAACCATTTCAACTACATAATGCAAGTTGAAG-AA  98
       |||| || ||| || ||||| ||||||||||| ||||||||||||| ||
seq2  ATTAGGTCCAAACGG-AACCA-TTCAACTACAT-ATGCAAGTTGAAGAAA  91

seq1  CAGTTTTTTTCCTGCCCATTTGTTCAATTACATTTCTTCAAGTAGAAAAT  148
      ||  |||||| ||||| |||   ||||||||  ||| |||||||||||||
seq2  CAAGTTTTTT-CTGCCAATT--GTCAATTACCATTC-TCAAGTAGAAAAT  137

seq1  CTCTGTGGTTTCC-AGGGGCTATAGTTAGCTTCCTAT-AAAAGCAAAGGT  196
      ||||||||||||| |||||||||||| ||| |||||| ||||||||||||
seq2  CTCTGTGGTTTCCAAGGGGCTATAGTAAGC-TCCTATAAAAAGCAAAGGT  186

seq1  GGGTAGCTAACAAT-AGGTGGTTTTATCTAGGA-CCAAGTAATTGGGCCA  244
      |||||   |||||| |||||| ||||||||||| ||| ||||| ||||||
seq2  GGGTAAGCAACAATAAGGTGG-TTTATCTAGGACCCAGGTAATAGGGCCA  235

seq1  CCTTCTCCACAAAGCCAGTTCAAACAGGGTGGTCTACGG-AAAGCAACTG  293
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CCTTCTCCACAAAGCCAGTTCAAACAGGGTGGTCTACGGAAAAGCAACTG  285

seq1  TGGCTGACATAGAATACAGACACACTCACTAGCTTTCATCCTAAGACCCT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGACATAGAATACAGACACACTCACTAGCTTTCATCCTAAGACCCT  335

seq1  GACTAACAGGTTGTGCACTTTTTAAAAATCAAATTTAGAAAAGAGC-AAC  392
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GACTAACAGGTTGTGCACTTTTTAAAAATCAAATTTAGAAAAGAGCAAAC  385

seq1  TATATTAAGGAATGGCAGGCATCCTAGCAGCCCAAGAATAGACTATGAGC  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTAAGGAATGGCAGGCATCCTAGCAGCCCAAGAATAGACTATGAGC  435

seq1  TATCAGTTTATATAAGGCTAGTCTTTAAAAATGTTATGGCTGGTGTTGTT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGTTTATATAAGGCTAGTCTTTAAAAATGTTATGGCTGGTGTTGTT  485

seq1  TCATCTATATTTATCTTATGATAATAACTGAAGTTATGTTTGTGTTGAGT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTATATTTATCTTATGATAATAACTGAAGTTATGTTTGTGTTGAGT  535

seq1  TAGAAAAGAAAAATTTCACAAATCTTGAAGGAGGTGGGCATCTAATAATT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAGAAAAATTTCACAAATCTTGAAGGAGGTGGGCATCTAATAATT  585

seq1  CACTGCTTGTATTAAAAAAAAAAGAAAGAAAAAGAGAAAGAACAATCCCC  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCTTGTATTAAAAAAAAAAGAAAGAAAAAGAGAAAGAACAATCCCC  635

seq1  ACAAGGCCTAGAGGAAGGTAAATTGCCTTTTCGTTAGGGCACCATGGCTA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGCCTAGAGGAAGGTAAATTGCCTTTTCGTTAGGGCACCATGGCTA  685

seq1  GATGCAGCCAGCGAGAGGCAGAGAGAGCAACAGGACACAAAGCACCCAAG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAGCCAGCGAGAGGCAGAGAGAGCAACAGGACACAAAGCACCCAAG  735

seq1  GGTAAAAGATAGCGACAGGGGAAGAGCAGTGATGCCTGGCGCTGTTCCGA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAAGATAGCGACAGGGGAAGAGCAGTGATGCCTGGCGCTGTTCCGA  785

seq1  CACAGGCAAACCTTAAGGTCCCCACCACCTTGCCCTTCAGGCTCATCTAC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGCAAACCTTAAGGTCCCCACCACCTTGCCCTTCAGGCTCATCTAC  835

seq1  TTCCTGTCTGCAGTGCAGAGATAAGCAGGGCAGGTAGAGCCCTTCTCGAG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTCTGCAGTGCAGAGATAAGCAGGGCAGGTAGAGCCCTTCTCGAG  885

seq1  AAAGTAACAGTGACACCCAAACAACCACAGCAGTGCTGGGGAAGGTGGCA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAACAGTGACACCCAAACAACCACAGCAGTGCTGGGGAAGGTGGCA  935

seq1  GCGGTCACTGGGTAAGGTACTTGTATCTACAAGCTCAACAAACTGAGTTG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGTCACTGGGTAAGGTACTTGTATCTACAAGCTCAACAAACTGAGTTG  985

seq1  GAACCCTGCAATCCATAGACAGGAAAGAGAACCCACAACAGCATGCTATC  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCTGCAATCCATAGACAGGAAAGAGAACCCACAACAGCATGCTATC  1035

seq1  CTCTGGCTTCCACATGTGTATTGTGGGCATGTGCATACACACCTCCATAA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGCTTCCACATGTGTATTGTGGGCATGTGCATACACACCTCCATAA  1085

seq1  ATAAACACATTTCTAGAAGAAAAGAAAAGCAGGTAACTTTAAAGTCAAGC  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACACATTTCTAGAAGAAAAGAAAAGCAGGTAACTTTAAAGTCAAGC  1135

seq1  AGGGGACACATTACTCCGTCCCTAGCAACAGAAAAACTGAATTC  1186
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGACACATTACTCCGTCCCTAGCAACAGAAAAACTGAATTC  1179