BAC Information

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BAC

Clone NameB6Ng01-257K24
Chromosome3 (Build37)
Map Location 23,959,856 - 23,961,011
singlet/doubletsinglet
Overlap geneEG635702
Upstream geneLOC623751, LOC100039548
Downstream geneEG665189
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257K24.bB6Ng01-257K24.g
ACCGA063321GA063322
length1,1451,041
definitionB6Ng01-257K24.b B6Ng01-257K24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcttcattttcctttattttatataaatgttttgacttccattt
tccatttctctgtttccttaattttttagctatttctacctttatacaca
taaacatatatgcatatataatatacagctgaataataatttcatagcta
aacacatatatgtctagttattttctattttataacattaaagataaatt
agtgaagcttacttgatttaattttaaatgtgtctgtattttatgtgttg
ctactgttgatattatgttagtttgtttttatattttctgagtgtcataa
aagacaaaaccttcaagaactgattgctctataaaataatctacaaataa
aatcagagcagatactcaaaccaacatatgtacaatattagcacagaaaa
gaaaaagaaacatagaaatacaaagtggaaagagctacaagagggcagct
acccccaggtcccatagggactcccaggccccagagacccataaagaatt
caggaagatacaaggcagtggaggatgaacatgaacctgaagagcttaaa
atatctctgaaataactgaaccactgggtctcatgagaagatgtttttca
atgtgatttcatggagttcagcaagtagtggaataagcagtacatatggc
aaagaacaccaaacacaatgatacagcggtgcatatgggtaaaggaaatc
aacagaaaaaggagcgtgttgctactgaacagggccactgggattgatgg
atcaccactgccaccctcactctgggagcagagattggggccactgaaat
gactgccatgcctaaggtcccactagggcagatagtgccaaatgctgggt
catatgctgaaacctagagcttatggtggtctgctcttggaagcataacc
caagtgcatgatcaccctgattctggacaaaagcaggttatttgagatga
ttcttagtgatattccatattttatggtgcttcagaaactttgaaccaga
ggactaatggaataaaatattgcagtaaaagagtttggagaaaataatat
attcagtgacccagtgtagatttcagacacttaataaagatgtgaataga
gaagatgggcaaatgtttaatatatgaacctgtgccatgtgaagg

gaattcattggcaaggtggaaaatttcctgaatacctatggctcaggctc
taagatcaataattgataaatgggatcttttggaactgaaaagcttctgt
aaataaatggatactgataataggacaaaatagcaatctacagattagga
aattttcttccctaatcctacatccagtataaggttaatcaatatccaaa
atgtataaagaacacaagaagttagactctgaaatactaaataacccaat
ttaaaaaatgggatacagagaaaaacagaaaaatctcaacagaggaatct
tgaatgtccaagaagctcttaaagacatgtttaatttacttagacatcag
gaaaatacaaatcacaaccacactgagatttcagcttacatccagcagaa
tgactacaatcataaacttaagtggctgtacacactggtgaggatgtaga
gaaaaagaaacactcctccatagctggtgccattgcaaacttgtataacc
actgtggaaatcatgctggtggttcctcagaaaattagaaatagttttac
ctgaagacccagctatacggctcttgggtatatacccaaaagatactcca
caatattacaaaatcctgtcctccactatgttcatagcagcctttttttt
ttttttaaagccagaaactggaggcaacccaaatgtccttccaccgaaaa
actgatacagaaaatgtggttaattcacacaatggaatattaattattca
gctattaaaagcaaggatagcataaattttacaggcaagtgaatggaact
agaaaatatcctgtgtgaggtaactcagacccaaaaatccatgtatggta
tgtactcactgataagaggatattagccaaaaagtactaaatacccaata
tacactccatagactcaaataagttaaacaagaagaaagggccaaatgag
agcttgcttcatctttcttagatggaaaacaaaataattatgggaggcag
agagaagagactgagtgggatggccggggttggggggagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_23959856_23961011
seq2: B6Ng01-257K24.b_43_1187

seq1  GAATTCTCTTCATTTTCCTTTATTTTATATAAATGTTTTGACTTCCATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTCATTTTCCTTTATTTTATATAAATGTTTTGACTTCCATTT  50

seq1  TCCATTTCTCTGTTTCCTTAATTTTTTAGCTATTTCTACCTTTATACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTTCTCTGTTTCCTTAATTTTTTAGCTATTTCTACCTTTATACACA  100

seq1  TAAACATATATGCATATATAATATACAGCTGAATAATAATTTCATAGCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACATATATGCATATATAATATACAGCTGAATAATAATTTCATAGCTA  150

seq1  AACACATATATGTCTAGTTATTTTCTATTTTATAACATTAAAGATAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACATATATGTCTAGTTATTTTCTATTTTATAACATTAAAGATAAATT  200

seq1  AGTGAAGCTTACTTGATTTAATTTTAAATGTGTCTGTATTTTATGTGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAGCTTACTTGATTTAATTTTAAATGTGTCTGTATTTTATGTGTTG  250

seq1  CTACTGTTGATATTATGTTAGTTTGTTTTTATATTTTCTGAGTGTCATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGTTGATATTATGTTAGTTTGTTTTTATATTTTCTGAGTGTCATAA  300

seq1  AAGACAAAACCTTCAAGAACTGATTGCTCTATAAAATAATCTACAAATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAAAACCTTCAAGAACTGATTGCTCTATAAAATAATCTACAAATAA  350

seq1  AATCAGAGCAGATACTCAAACCAACATATGTACAATATTAGCACAGAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGAGCAGATACTCAAACCAACATATGTACAATATTAGCACAGAAAA  400

seq1  GAAAAAGAAACATAGAAATACAAAGTGGAAAGAGCTACAAGAGGGCAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAGAAACATAGAAATACAAAGTGGAAAGAGCTACAAGAGGGCAGCT  450

seq1  ACCCCCAGGTCCCATAGGGACTCCCAGGCCCCAGAGACCCATAAAGAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCAGGTCCCATAGGGACTCCCAGGCCCCAGAGACCCATAAAGAATT  500

seq1  CAGGAAGATACAAGGCAGTGGAGGATGAACATGAACCTGAAGAGCTTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAGATACAAGGCAGTGGAGGATGAACATGAACCTGAAGAGCTTAAA  550

seq1  ATATCTCTGAAATAACTGAACCACTGGGTCTCATGAGAAGATGTTTTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTCTGAAATAACTGAACCACTGGGTCTCATGAGAAGATGTTTTTCA  600

seq1  ATGTGATTTCATGGAGTTCAGCAAGTAGTGGAATAAGCAGTACATATGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGATTTCATGGAGTTCAGCAAGTAGTGGAATAAGCAGTACATATGGC  650

seq1  AAAGAACACCAAACACAATGATACAGCGGTGCATATGGGTAAAGGAAATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAACACCAAACACAATGATACAGCGGTGCATATGGGTAAAGGAAATC  700

seq1  AACAGAAAAAGGAGCGTGTTGCTACTGAACAGGGCCACTGGGATTGATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAAAAAGGAGCGTGTTGCTACTGAACAGGGCCACTGGGATTGATGG  750

seq1  ATCACCACTGCCACCCTCACTCTGGGAGCAGAGATTGGGGCCACTGAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCACTGCCACCCTCACTCTGGGAGCAGAGATTGGGGCCACTGAAAT  800

seq1  GACTGCCATGCCTAAGGTCCCACTAGGGCAGATAGTGCCAAATGCTGGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGCCATGCCTAAGGTCCCACTAGGGCAGATAGTGCCAAATGCTGGGT  850

seq1  CATATGCTGAAACCTAGAGCTTATGGTGGTCTGCTCTTGGAAGCATAACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGCTGAAACCTAGAGCTTATGGTGGTCTGCTCTTGGAAGCATAACC  900

seq1  CAAGTGCATGATCACCCTGATTCTGGACAAAAGCAGGTTATTTGAGATGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGCATGATCACCCTGATTCTGGACAAAAGCAGGTTATTTGAGATGA  950

seq1  TTCTTAGTGATATTCCATA-TTTATGGTGCTTCAGAAACTTTGAACCAGA  999
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTCTTAGTGATATTCCATATTTTATGGTGCTTCAGAAACTTTGAACCAGA  1000

seq1  GGACTAATTGGAATAAATATTTGCAAGTAAAAGAGTTTGGAGAAAATAAT  1049
      ||||||| |||||||||   |||| |||||||||||||||||||||||||
seq2  GGACTAA-TGGAATAAAATATTGC-AGTAAAAGAGTTTGGAGAAAATAAT  1048

seq1  ATATTCAGTGACCCAGTGTAGATTCCAAGACCACTTTAATAAAAGAATGT  1099
      |||||||||||||||||||||||| | ||| ||| ||||||||   ||||
seq2  ATATTCAGTGACCCAGTGTAGATTTC-AGA-CAC-TTAATAAA--GATGT  1093

seq1  GAAATAGAG-AGATGGGGAAAATGGTTAAATATAGTGGAACCTGTGGCAG  1148
      | ||||||| ||||||| |||   ||| ||||||   ||||||||| || 
seq2  G-AATAGAGAAGATGGGCAAA--TGTTTAATATA--TGAACCTGTGCCA-  1137

seq1  TGTGAAGG  1156
      ||||||||
seq2  TGTGAAGG  1145


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