BAC Information

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BAC

Clone NameB6Ng01-257L19
Chromosome3 (Build37)
Map Location 140,923,466 - 140,924,629
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC621343, 4930590L14Rik, Pdha2
Downstream geneUnc5c, LOC100039923, Bmpr1b, Gabarapl2-ps3, Pdlim5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257L19.bB6Ng01-257L19.g
ACCGA063357GA063358
length1,156522
definitionB6Ng01-257L19.b B6Ng01-257L19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccactgtttcagcagtggtattgtttgatttgacaaggaaaggg
gataacatttgaaatgtaaataaagaaaatatctaattaaaaaaaatgct
tggccttggggctggagagatagttcagtggctgagggcaatggctcctg
tttcagagaacttaagtttcattcccaggactcacagggtagcacacagc
tatcagtaactccagtttcaacttctgcttttattagtagtacaatcaca
tggtgcacagacatatgtgtaggtaaataacctataaatgcaaaataacc
tatttttttaatgtcctctgctcaggagtccaaaagatacaatttttgta
gttcctgtataaatgctatttctctgaaacacaattcctttatattcatc
gaatgtttctgttcctcttaaaattaatatcctacaccatcatttctccc
tttctagctaaatttggacagatctcttctcctgaatccaagaacaatgt
tcttttgccctctgataatatatactaatgtatgggccattttatattta
ttgaaatacatgtaatataataactatgattgtcattgaatacagtgcca
gatgaatgaacataattttaaaaatgtatatatgctattaaaacgtcgag
cttggtaaggttgtggtaatccagctattattcctgatgactagttctag
tttgggctagaaacattttcacatttgtcagataatgccacatctcagcc
tcaatgtctgaatttaaccagcatgcattattcaagctccattttacaag
catatgagagaatttgaataaaagaaatggtaactttgtatgcaaaattc
aaagtgaaaaaaaatctgtgtattcacaataaagacgaatatgatttttt
tttctggttatcgggtcctctttattgtggagagaatgaggcaaaagaaa
acgcatacactgtgtttttccttttttccttcatagagagaaacaatttt
actttgtagtatttcctatcatcagcagatttgatactgagtcctcaata
tttaatataagccagtgttgaagaactgtagtagaagatattccagactt
caagacaactgagtcttctatattgaggaaggaggaaagtagtggaagaa
tacatt

tttgtttaactctgtaccccatttttctatagggttatttgattctctga
aatctaacttcttgagttctttgtaaatattggatattggtcctctatcg
gatgtaagattggcaaagatcttttcccaatgtgttggttgctttttgct
gaaaaaaaaaaaagcctgatatggctgtctcctgagtggccctgctagag
ccttttaaatacagaggatgatgttagcagccaaccattggaatgagcgt
ggagtccctaatagaggagttagataagggactgacagagtagaagggtt
ttgcaacctcataggaagaacaacaatatcaaccaaccagacaccccctc
ccctccaacccagaactcccagggactaatcaacaaaggagtacacatgg
ctctagctgcatatttagaagagaataaccttttcatgcatcaatggtag
gagaggtccttggttctatgaaagcgtgatagatgccccagtgtagtgga
attgagagtggggaggtgggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_140923466_140924629
seq2: B6Ng01-257L19.b_45_1200

seq1  GAATTCCCACTGTTTCAGCAGTGGTATTGTTTGATTTGACAAGGAAAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCACTGTTTCAGCAGTGGTATTGTTTGATTTGACAAGGAAAGGG  50

seq1  GATAACATTTGAAATGTAAATAAAGAAAATATCTAATTAAAAAAAATGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACATTTGAAATGTAAATAAAGAAAATATCTAATTAAAAAAAATGCT  100

seq1  TGGCCTTGGGGCTGGAGAGATAGTTCAGTGGCTGAGGGCAATGGCTCCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTTGGGGCTGGAGAGATAGTTCAGTGGCTGAGGGCAATGGCTCCTG  150

seq1  TTTCAGAGAACTTAAGTTTCATTCCCAGGACTCACAGGGTAGCACACAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGAGAACTTAAGTTTCATTCCCAGGACTCACAGGGTAGCACACAGC  200

seq1  TATCAGTAACTCCAGTTTCAACTTCTGCTTTTATTAGTAGTACAATCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGTAACTCCAGTTTCAACTTCTGCTTTTATTAGTAGTACAATCACA  250

seq1  TGGTGCACAGACATATGTGTAGGTAAATAACCTATAAATGCAAAATAACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCACAGACATATGTGTAGGTAAATAACCTATAAATGCAAAATAACC  300

seq1  TATTTTTTTAATGTCCTCTGCTCAGGAGTCCAAAAGATACAATTTTTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTTAATGTCCTCTGCTCAGGAGTCCAAAAGATACAATTTTTGTA  350

seq1  GTTCCTGTATAAATGCTATTTCTCTGAAACACAATTCCTTTATATTCATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTGTATAAATGCTATTTCTCTGAAACACAATTCCTTTATATTCATC  400

seq1  GAATGTTTCTGTTCCTCTTAAAATTAATATCCTACACCATCATTTCTCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTTTCTGTTCCTCTTAAAATTAATATCCTACACCATCATTTCTCCC  450

seq1  TTTCTAGCTAAATTTGGACAGATCTCTTCTCCTGAATCCAAGAACAATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAGCTAAATTTGGACAGATCTCTTCTCCTGAATCCAAGAACAATGT  500

seq1  TCTTTTGCCCTCTGATAATATATACTAATGTATGGGCCATTTTATATTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGCCCTCTGATAATATATACTAATGTATGGGCCATTTTATATTTA  550

seq1  TTGAAATACATGTAATATAATAACTATGATTGTCATTGAATACAGTGCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATACATGTAATATAATAACTATGATTGTCATTGAATACAGTGCCA  600

seq1  GATGAATGAACATAATTTTAAAAATGTATATATGCTATTAAAACGTCGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAATGAACATAATTTTAAAAATGTATATATGCTATTAAAACGTCGAG  650

seq1  CTTGGTAAGGTTGTGGTAATCCAGCTATTATTCCTGATGACTAGTTCTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTAAGGTTGTGGTAATCCAGCTATTATTCCTGATGACTAGTTCTAG  700

seq1  TTTGGGCTAGAAACATTTTCACATTTGTCAGATAATGCCACATCTCAGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGCTAGAAACATTTTCACATTTGTCAGATAATGCCACATCTCAGCC  750

seq1  TCAATGTCTGAATTTAACCAGCATGCATTATTCAAGCTCCATTTTACAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGTCTGAATTTAACCAGCATGCATTATTCAAGCTCCATTTTACAAG  800

seq1  CATATGAGAGAATTTGAATAAAAGAAATGGTAACTTTGTATGCAAAATTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGAGAGAATTTGAATAAAAGAAATGGTAACTTTGTATGCAAAATTC  850

seq1  AAAGTGAAAAAAAATCTGTGTATTCACAATAAAGACGAATATGATTTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGAAAAAAAATCTGTGTATTCACAATAAAGACGAATATGATTTTTT  900

seq1  TTTCTGGTTATCGGGTCCTCTTTATTGTGGAGAGAATGAGGCAAAAGAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGGTTATCGGGTCCTCTTTATTGTGGAGAGAATGAGGCAAAAGAAA  950

seq1  ACGCATACACTGTGTTTTTCCTTTTTTCCTTCATAGAGAGAAACAATTTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCATACACTGTGTTTTTCCTTTTTTCCTTCATAGAGAGAAACAATTTT  1000

seq1  ACTTTGTAGTATTTCCTATCATCAGCAGATTTGATACTGAGTCCTCAAAT  1050
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ACTTTGTAGTATTTCCTATCATCAGCAGATTTGATACTGAGTCCTC-AAT  1049

seq1  ATTTAATATTAAGCCAGTGTTTAAAGATACTGTAAGTAGAAGATA-TCCA  1099
      |||||||| |||||||||| || |||| ||||| ||||||||||| ||||
seq2  ATTTAATA-TAAGCCAGTG-TTGAAGA-ACTGT-AGTAGAAGATATTCCA  1095

seq1  GACTTCAAAGACAAAACTGAAGTC-TCTATATTGAGGAAGAAGGAAAGTA  1148
      |||||| |||||  ||||| |||| ||||||||||||||| |||||||||
seq2  GACTTC-AAGAC--AACTG-AGTCTTCTATATTGAGGAAGGAGGAAAGTA  1141

seq1  GTTGGAAGATTACATT  1164
      | ||||||| ||||||
seq2  G-TGGAAGAATACATT  1156


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