BAC Information

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BAC

Clone NameB6Ng01-258K07
Chromosome3 (Build37)
Map Location 47,547,271 - 47,548,452
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC545517, LOC383849, LOC383850, LOC100039426
Downstream geneLOC666202, LOC666208, 1700018B24Rik, LOC100039404
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258K07.bB6Ng01-258K07.g
ACCGA064032GA064033
length1,1851,164
definitionB6Ng01-258K07.b B6Ng01-258K07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaacactgagat
tccacctcacaccagtcagaatggctaagatcaaaaattaaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctcaattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaataccactcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctcctctat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtaagataacacattcacaaa
gaaactcacaaaatatgtactcactgataagtggatattagccacaaacc
taggatactcaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagagtggacactatgcccctccttatatttgggaa
caaaacacgcatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaacgctgacaccattgcatacactagcaagatttaattgaaag
gacccagatgtagctgtctcttgtgagactatgccggggcctagcaaaca
cagaagtggatgctcacagtcagctaatggatagatcatagggctcccaa
tggaggagctagagaaagtagccaagagcttaaagggatctgcaaccctt
ataggtggaacacattatgactaaccagtaccccggaagcttcttgactt
ctagctgctatatatccaaagatgggctagtcgcaatcactggaagagag
ggtccaattgaacttgcaaatttatatgccaagttccgggaaccctaggt
catagagggatgtgtgggcgagtgaagtgtgggct

gaattctctgtttagatctgtactccagttttaactggcttattggcttg
ttgatatttagttacttgtgttctttatattttagatgtcagacctctgt
cagatttggggatagtgaaaatctggaaaagcataatttgaataagttta
tttttgtaaattcttattcaagttattaaaattgtatttgaaagtaaatt
tttaatattattgtattaaaatattttcaaaatctgaacttacccatcaa
acactaacactaattaatatgataggcagtgaaatacttaatattaaagt
caaaatgaatagaatttttcattaattgatgattataatttcttcattta
tattcagtatgctagaaaaattttaaaggacatgaaaatataaaatatta
gtagcataataaatgttctcatgaattttttatcacaccagattttaaca
aaacatgttaagataatatgttgatatgttcaatttttaatatttcaata
caagtttataaaacaaatgtgaaagggtattagcttaagagtagccagag
acacactactacacatgtacagacacagaaaattcaagcagtaagatggt
ggaaagtagctggaaatgggaggcaggacgacggtgtgatacaaatagat
ggtataaaaattaggcttaaaatgttaccagagatcatgtcctatatctt
aagaattactacaaccttacgtacttgtacatatttgatacaatttgcag
actgtttgatcttgaactttgatatttgtgagaaatctttgtcttcaaca
accctcacagcctccacggccccaaaacaaacctaaatgtttaataatta
ttgaaaggttcatttttcatcttgtcttaatcacatagcaagagtgacaa
gaagataaagaaggagatgaccaaggggcaaactcagatgacatggagat
accatacatgcagatagagatgcagatatacacactactagctgctgttt
gactcttctctcagaaaaaacaaactgacttcatagattatttctctagt
atttactgattccacgatctagtgcaacattaatgctttgtaccttttca
tgtaaatatttcctgactcatgctgcatcatctattgctacatgtagaaa
taattggagaataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_47547271_47548452
seq2: B6Ng01-258K07.g_67_1230 (reverse)

seq1  TTATTCT-CAATTATTTCTACATTGTAGCAATTTGATTTAATGCAGCACT  49
      ||||||| |||||||||||||| |||||||||   |  | |||||||| |
seq2  TTATTCTCCAATTATTTCTACA-TGTAGCAAT---AGATGATGCAGCA-T  45

seq1  GAGTTAGAGAATATTTACATGGAAAAAGTACAAAGGCATTTATGTTGGCA  99
      |||| ||  ||||||||||| ||||| ||||||| ||||| ||||| |||
seq2  GAGTCAGGAAATATTTACAT-GAAAAGGTACAAA-GCATTAATGTT-GCA  92

seq1  CTTAGGAACCGGTGGAAATCAGTAAATACTAGAGAAATAATTCTAATGAA  149
      ||   || |  |||| |||||||||||||||||||||||| ||| |||||
seq2  CT--AGATC--GTGG-AATCAGTAAATACTAGAGAAATAA-TCT-ATGAA  135

seq1  GTCAGTTTGTTTTTTCTGAGAAGGAAGGAAGTCAAACAAGCAGCTAGTAG  199
      |||||||||||||||||||||  ||||  |||||||| ||||||||||||
seq2  GTCAGTTTGTTTTTTCTGAGA--GAAG--AGTCAAAC-AGCAGCTAGTAG  180

seq1  TGTGTATATCTGCATCTCTATCTGCATGTATGGTATCTCCATGTCATCTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATATCTGCATCTCTATCTGCATGTATGGTATCTCCATGTCATCTG  230

seq1  AGTTTGCCCCTTGGTCATCTCCTTCTTTATCTTCTTGTCACTCTTGCTAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGCCCCTTGGTCATCTCCTTCTTTATCTTCTTGTCACTCTTGCTAT  280

seq1  GTGATTAAGACAAGATGAAAAATGAACC-TTCAATAATTATTAAACATTT  348
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GTGATTAAGACAAGATGAAAAATGAACCTTTCAATAATTATTAAACATTT  330

seq1  AGGTTTGTTTTGGGGCCGTGGAGGCTGTGAGGGTTGTTGAAGACAAAGAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTGTTTTGGGGCCGTGGAGGCTGTGAGGGTTGTTGAAGACAAAGAT  380

seq1  TTCTCACAAATATCAAAGTTCAAGATCAAACAGTCTGCAAATTGTATCAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACAAATATCAAAGTTCAAGATCAAACAGTCTGCAAATTGTATCAA  430

seq1  ATATGTACAAGTACGTAAGGTTGTAGTAATTCTTAAGATATAGGACATGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTACAAGTACGTAAGGTTGTAGTAATTCTTAAGATATAGGACATGA  480

seq1  TCTCTGGTAACATTTTAAGCCTAATTTTTATACCATCTATTTGTATCACA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGTAACATTTTAAGCCTAATTTTTATACCATCTATTTGTATCACA  530

seq1  CCGTCGTCCTGCCTCCCATTTCCAGCTACTTTCCACCATCTTACTGCTTG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTCGTCCTGCCTCCCATTTCCAGCTACTTTCCACCATCTTACTGCTTG  580

seq1  AATTTTCTGTGTCTGTACATGTGTAGTAGTGTGTCTCTGGCTACTCTTAA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCTGTGTCTGTACATGTGTAGTAGTGTGTCTCTGGCTACTCTTAA  630

seq1  GCTAATACCCTTTCACATTTGTTTTATAAACTTGTATTGAAATATTAAAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATACCCTTTCACATTTGTTTTATAAACTTGTATTGAAATATTAAAA  680

seq1  ATTGAACATATCAACATATTATCTTAACATGTTTTGTTAAAATCTGGTGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAACATATCAACATATTATCTTAACATGTTTTGTTAAAATCTGGTGT  730

seq1  GATAAAAAATTCATGAGAACATTTATTATGCTACTAATATTTTATATTTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAAAATTCATGAGAACATTTATTATGCTACTAATATTTTATATTTT  780

seq1  CATGTCCTTTAAAATTTTTCTAGCATACTGAATATAAATGAAGAAATTAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCCTTTAAAATTTTTCTAGCATACTGAATATAAATGAAGAAATTAT  830

seq1  AATCATCAATTAATGAAAAATTCTATTCATTTTGACTTTAATATTAAGTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATCAATTAATGAAAAATTCTATTCATTTTGACTTTAATATTAAGTA  880

seq1  TTTCACTGCCTATCATATTAATTAGTGTTAGTGTTTGATGGGTAAGTTCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTGCCTATCATATTAATTAGTGTTAGTGTTTGATGGGTAAGTTCA  930

seq1  GATTTTGAAAATATTTTAATACAATAATATTAAAAATTTACTTTCAAATA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTGAAAATATTTTAATACAATAATATTAAAAATTTACTTTCAAATA  980

seq1  CAATTTTAATAACTTGAATAAGAATTTACAAAAATAAACTTATTCAAATT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTAATAACTTGAATAAGAATTTACAAAAATAAACTTATTCAAATT  1030

seq1  ATGCTTTTCCAGATTTTCACTATCCCCAAATCTGACAGAGGTCTGACATC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTTCCAGATTTTCACTATCCCCAAATCTGACAGAGGTCTGACATC  1080

seq1  TAAAATATAAAGAACACAAGTAACTAAATATCAACAAGCCAATAAGCCAG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATATAAAGAACACAAGTAACTAAATATCAACAAGCCAATAAGCCAG  1130

seq1  TTAAAACTGGAGTACAGATCTAAACAGAGAATTC  1182
      ||||||||||||||||||||||||||||||||||
seq2  TTAAAACTGGAGTACAGATCTAAACAGAGAATTC  1164


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