BAC Information

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BAC

Clone NameB6Ng01-260I02
Chromosome3 (Build37)
Map Location 76,108,508 - 76,239,613
singlet/doubletdoublet
Overlap geneFstl5
Upstream geneWdr49, Pdcd10, Serpini1, Golph4
Downstream geneLOC100041625, LOC100041635
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-260I02.bB6Ng01-260I02.g
ACCGA065411GA065412
length1,0781,082
definitionB6Ng01-260I02.b B6Ng01-260I02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,238,535 - 76,239,613)(76,108,508 - 76,109,311)
sequence
gaattcattctggcaaaagtgtctttatgaaaaaggacactatatcccct
ttccatctgtgtagacataactgcaataactataagtaattgttcaaatt
atttatgttagtttttaaatcagaaacattgttggaaaggcactcagtca
attcagtatttctcactggctgtattcctgtcatgccaatgaatggttgt
agtttcagaagactccagctctgttgtactggcttgggttcctcatagga
atacagtattcttaagttagatgtttctctttgaatatgccatatattta
agtttaatttcatcctgttcataggcacgcttttcattctatgttcccta
cttcaatgagcaacatcattattcccaatctagaaatctgacattactct
tcaatctcacattcccggattgtatattcaactacccactgagtcaagtt
ggttatatgtgtagttattttccagacaaggccttttctggcacatctca
atagctacttggacctggcctcaatacctttacaatgaggttgtcttatt
tctgttttatttgctgctatatatttttaataaaggtctttataaattaa
tgcttcagcatacaaaaggtattaaatagttccattaagtcatattttaa
catagtgattgtgatttctgaggaagagaatttttcttatattatcatta
tgaaatctacattccattgaaagtatttactataaagagcaacaacattt
tgcatataatcatgcacattttatatatttaagtagctattttgtcattt
taaatttctaagaacatttatctaacatttttaagaagaacaaagaaaaa
acctattaaacaatcattttaaatatgtttgtagttggtatgtgatctat
taaagtacttacttttgccactaggggaaccatgaatttctttcaattct
tttatttttttttcctttacaaatttaattgtattaatttttggtaaagc
ctctattattattatcagcagtgagtttatagatcatcttacatacgtgg
tgtgtatggtgtgtgtattgtgatagag

gaattcattgctgagtactactccattgtgtagatgtaccacattttctg
tatccattcctctgctgaggggcatctgggatctttccagcttctggatg
tacaggccagtgatagattctttgaaaatcagacatagtactaccgggag
atccagcaattctcctgggcatatcctcggaatatattccaacttgtaat
aaggacacatgctccactatgttcatagcagttctggatattttgattga
agttatttgcctaaagtttcctccagaacattcatttacatttttccttt
atcttccatctgctttctggtgttgatatcaaggtattactgggcctggt
ctgtgtttaaaaaaaaaaacagtaatttagcagtgttctttttattttat
ggaatattctgaggaccatttgttttaattactctttataaatcaggagg
aatttaataccaagttcatctgggcctggaatttatgattgttatagtat
agtttttcctttaaatagctgctgtaataccattgtttgttacatttttg
tgttttattttgtttatgacttcttatttaactttggtagatcacatgtg
tctaaatattcaactacttttatctttaagattttcaaattggttacaag
gtaaattttcaaagcaaggaataatggtcatttgactctcatcaatcagt
aaaatatcttccctttcatctttaaccttgttactgcagtcctctctttc
ttttggttagtttggctaaagggattgccagttatattttttttataatg
ttctttccttagttcttattatgtgcatctgggtgcaggtatgtgcaagt
gagtgctggtgcctaaaatgaccccctagcaatacaacaacagtcattta
tttcattcattgtttgcaatttccttttgttttcatttcacttatgccct
gatcttcatcatttcttgctgtatgctgctttagcgtttgctgcactgtt
ttatttttttttttcctaagccgtggagaacatgcatgcatttcaataaa
tgctgtttttcatgtatcacaaacactcactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_76238535_76239613
seq2: B6Ng01-260I02.b_44_1121 (reverse)

seq1  CTCTATCAC-ATACACACA-CATACACA-CACGTATGTAAGATGATCTTA  47
      ||||||||| ||||||||| |||||||| |||||||||||||||||| ||
seq2  CTCTATCACAATACACACACCATACACACCACGTATGTAAGATGATC-TA  49

seq1  TAAACTCACCTGCTGATAATTAATATAGAGGCTTTTACCAAAAATTTAAT  97
      |||||||| ||||||||||| |  |||||||| ||||||||||| |||||
seq2  TAAACTCA-CTGCTGATAATAATAATAGAGGC-TTTACCAAAAA-TTAAT  96

seq1  ACAATTAAATTTGTAAAGGAAAAAAAAATAAAAGAATTGAAAGAAATTCA  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTAAATTTGTAAAGGAAAAAAAAATAAAAGAATTGAAAGAAATTCA  146

seq1  TGGTTCCCCTAGTGGCAAAAGTAAGTACTTTAATAGATCACATACCAACT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCCCCTAGTGGCAAAAGTAAGTACTTTAATAGATCACATACCAACT  196

seq1  ACAAACATATTTAAAATGATTGTTTAATAGGTTTTTTCTTTGTTCTTCTT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACATATTTAAAATGATTGTTTAATAGGTTTTTTCTTTGTTCTTCTT  246

seq1  AAAAATGTTAGATAAATGTTCTTAGAAATTTAAAATGACAAAATAGCTAC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGTTAGATAAATGTTCTTAGAAATTTAAAATGACAAAATAGCTAC  296

seq1  TTAAATATATAAAATGTGCATGATTATATGCAAAATGTTGTTGCTCTTTA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATATATAAAATGTGCATGATTATATGCAAAATGTTGTTGCTCTTTA  346

seq1  TAGTAAATACTTTCAATGGAATGTAGATTTCATAATGATAATATAAGAAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAATACTTTCAATGGAATGTAGATTTCATAATGATAATATAAGAAA  396

seq1  AATTCTCTTCCTCAGAAATCACAATCACTATGTTAAAATATGACTTAATG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTCTTCCTCAGAAATCACAATCACTATGTTAAAATATGACTTAATG  446

seq1  GAACTATTTAATACCTTTTGTATGCTGAAGCATTAATTTATAAAGACCTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTATTTAATACCTTTTGTATGCTGAAGCATTAATTTATAAAGACCTT  496

seq1  TATTAAAAATATATAGCAGCAAATAAAACAGAAATAAGACAACCTCATTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAAATATATAGCAGCAAATAAAACAGAAATAAGACAACCTCATTG  546

seq1  TAAAGGTATTGAGGCCAGGTCCAAGTAGCTATTGAGATGTGCCAGAAAAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGTATTGAGGCCAGGTCCAAGTAGCTATTGAGATGTGCCAGAAAAG  596

seq1  GCCTTGTCTGGAAAATAACTACACATATAACCAACTTGACTCAGTGGGTA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGTCTGGAAAATAACTACACATATAACCAACTTGACTCAGTGGGTA  646

seq1  GTTGAATATACAATCCGGGAATGTGAGATTGAAGAGTAATGTCAGATTTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAATATACAATCCGGGAATGTGAGATTGAAGAGTAATGTCAGATTTC  696

seq1  TAGATTGGGAATAATGATGTTGCTCATTGAAGTAGGGAACATAGAATGAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTGGGAATAATGATGTTGCTCATTGAAGTAGGGAACATAGAATGAA  746

seq1  AAGCGTGCCTATGAACAGGATGAAATTAAACTTAAATATATGGCATATTC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCGTGCCTATGAACAGGATGAAATTAAACTTAAATATATGGCATATTC  796

seq1  AAAGAGAAACATCTAACTTAAGAATACTGTATTCCTATGAGGAACCCAAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAAACATCTAACTTAAGAATACTGTATTCCTATGAGGAACCCAAG  846

seq1  CCAGTACAACAGAGCTGGAGTCTTCTGAAACTACAACCATTCATTGGCAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTACAACAGAGCTGGAGTCTTCTGAAACTACAACCATTCATTGGCAT  896

seq1  GACAGGAATACAGCCAGTGAGAAATACTGAATTGACTGAGTGCCTTTCCA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGAATACAGCCAGTGAGAAATACTGAATTGACTGAGTGCCTTTCCA  946

seq1  ACAATGTTTCTGATTTAAAAACTAACATAAATAATTTGAACAATTACTTA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGTTTCTGATTTAAAAACTAACATAAATAATTTGAACAATTACTTA  996

seq1  TAGTTATTGCAGTTATGTCTACACAGATGGAAAGGGGATATAGTGTCCTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTATTGCAGTTATGTCTACACAGATGGAAAGGGGATATAGTGTCCTT  1046

seq1  TTTCATAAAGACACTTTTGCCAGAATGAATTC  1079
      ||||||||||||||||||||||||||||||||
seq2  TTTCATAAAGACACTTTTGCCAGAATGAATTC  1078


seq1: chr3_76108508_76109311
seq2: B6Ng01-260I02.g_360_1144

seq1  TTTATCTTCCATCTGCTTTCTGGTGTTGATATCAAGGTATTACTGGGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTTCCATCTGCTTTCTGGTGTTGATATCAAGGTATTACTGGGCCT  50

seq1  GGTCTGTGTTTAAAAAAAAAAACAGTAATTTAGCAGTGTTCTTTTTATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGTGTTTAAAAAAAAAAACAGTAATTTAGCAGTGTTCTTTTTATTT  100

seq1  TATGGAATATTCTGAGGACCATTTGTTTTAATTACTCTTTATAAATCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAATATTCTGAGGACCATTTGTTTTAATTACTCTTTATAAATCAGG  150

seq1  AGGAATTTAATACCAAGTTCATCTGGGCCTGGAATTTATGATTGTTATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATTTAATACCAAGTTCATCTGGGCCTGGAATTTATGATTGTTATAG  200

seq1  TATAGTTTTTCCTTTAAATAGCTGCTGTAATACCATTGTTTGTTACATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTTTTTCCTTTAAATAGCTGCTGTAATACCATTGTTTGTTACATTT  250

seq1  TTGTGTTTTATTTTGTTTATGACTTCTTATTTAACTTTGGTAGATCACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTTTATTTTGTTTATGACTTCTTATTTAACTTTGGTAGATCACAT  300

seq1  GTGTCTAAATATTCAACTACTTTTATCTTTAAGATTTTCAAATTGGTTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTAAATATTCAACTACTTTTATCTTTAAGATTTTCAAATTGGTTAC  350

seq1  AAGGTAAATTTTCAAAGCAAGGAATAATGGTCATTTGACTCTCATCAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAAATTTTCAAAGCAAGGAATAATGGTCATTTGACTCTCATCAATC  400

seq1  AGTAAAATATCTTCCCTTTCATCTTTAACCTTGTTACTGCAGTCCTCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAATATCTTCCCTTTCATCTTTAACCTTGTTACTGCAGTCCTCTCT  450

seq1  TTCTTTTGGTTAGTTTGGCT-AAGGGATTGCCAGTTATA-TTTTTTTATA  498
      |||||||||||||||||||| |||||||||||||||||| ||||||||||
seq2  TTCTTTTGGTTAGTTTGGCTAAAGGGATTGCCAGTTATATTTTTTTTATA  500

seq1  ATGTTCTTTCCTTAGTTCTTATTATGTGCATCTGGGTGCAGGTATGTGCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCTTTCCTTAGTTCTTATTATGTGCATCTGGGTGCAGGTATGTGCA  550

seq1  AGTGAGTGCTGGTGCCTAAAATGACCCCCTAGCAATACAACAAACAGTCA  598
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AGTGAGTGCTGGTGCCTAAAATGACCCCCTAGCAATACAAC-AACAGTCA  599

seq1  TTTATTTCATTCATTGTTTGCAATTTCCTTTTGTTTTCATTTCACTTATG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTCATTCATTGTTTGCAATTTCCTTTTGTTTTCATTTCACTTATG  649

seq1  CCCTGATCTTCATCATTTCTTGCTGTATGCTGCTTTAGCGTTTTGCTTGC  698
      |||||||||||||||||||||||||||||||||||||||| ||||| |||
seq2  CCCTGATCTTCATCATTTCTTGCTGTATGCTGCTTTAGCG-TTTGC-TGC  697

seq1  ACTTGTTTTTTTTTTTTTTTTTTTTTTTTCTTAAAGCCGTGAGGAACATT  748
      ||         | |||| |||||||||||| | ||||||||  ||||| |
seq2  AC---------TGTTTTATTTTTTTTTTTCCT-AAGCCGTGGAGAACA-T  736

seq1  GCATTGCATTTCATAAAATGCTTGTTTTTCAATGTATCAACAAAACAAAC  798
      ||| |||||||||  |||||| |||||||| ||||||| ||||   | ||
seq2  GCA-TGCATTTCAATAAATGC-TGTTTTTC-ATGTATC-ACAA---ACAC  779

seq1  TCACTT  804
      ||||||
seq2  TCACTT  785


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