BAC Information

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BAC

Clone NameB6Ng01-261E08
Chromosome3 (Build37)
Map Location 72,194,327 - 72,195,447
singlet/doubletsinglet
Overlap genenone
Upstream geneEG667377, LOC667385, LOC100041459
Downstream gene2010204N08Rik, Slitrk3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-261E08.bB6Ng01-261E08.g
ACCGA065983GA065984
length1,134417
definitionB6Ng01-261E08.b B6Ng01-261E08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccataattcaggatgattatgctaatctttgcgtgttaaatatct
ctcaaggccccatatatctatgtctttttcattagtgaagggtaaggaag
aaagatttaggaggtagagcttagtggaaggaactaggctcactgaggag
gtgtctttagaggggttaccatggtctcatctctctctctctttttctgt
ttggttttcagggcattgtaagatgagaatcttacttagaccatgctctt
caacatgatgctgagcctcaccacaagcccaaaatggtggggaacttggt
catggatagataccattgaaaatgagatcaaaatgggtggctcatctcac
tttacttatcgtgtgccctttatcatagtaacagatacataatttatatc
tatcagcccctgaaaatttaatacttctttaagaattgtaagaaggtctt
gtactagctttgttgttgttgttattgttgttttgttttgttttctaatt
gcagtaagcactacttacataaatttcaaaagaatatatgtgttcataat
catacctctcctaagtagctcaaaaattatattcccatttttttctaaga
atgcaaataagcaatgtaccataaagctacatggaaatatttctgtatga
tagaaatcaagaagtaatacatagcttgttactatttctccatcttttca
ttaatttaattaattagtttatttgatagtttatgggtgtatgtatatgg
gctttacatctcacaggtgtatgttagaaaataacttctgagatactttt
tttcattctaataaatgaattcttgagtctggaaatcagttcttcattct
tggcagaaaatgattttcccctactgatctacaatactggccttaattat
ttatacatttaagctataaatttggtacttcagatttttttggattcaca
taagaaagttggaattatattataagttttgtttatttatttacttagta
tatgtaagtttgggcctacttatcagatttaaactgaattgtatttcagc
atttactttctttacgtatgggtgaattacggtcattccagggaacaata
ccacggatggttagccgaatattggtttaatttc

ctctctgtaactgaccaacagttcccctgaaactctctttgaagtccaga
ctggcctcaactttcagatatcaaccggcctcttcctcaagtgctgatat
tatatggatgtgacaccacgactagctttttaaaattatatatatatata
tatatatatatatatatatatatataaattgtatatatatatacatatat
atatgtacaatgtatatatatataaattgtatatatatatatataatata
taaaagtaaggaggggtgggaggtaaaatatattaaatatataagaaagt
attaatactttatctaatatatgtatatatatatatatatatatatatat
acgttatttgttgtcggcgagaggtggtatgggtttcatttttagataaa
ttaatctgttggtatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_72194327_72195447
seq2: B6Ng01-261E08.b_48_1181 (reverse)

seq1  GAAATTAAACCAATAATATGCTAAACAATCTGT-GTATTGTTCCTGGAAA  49
      ||||||||||||||| |  ||| ||| ||| || ||||||||||  | ||
seq2  GAAATTAAACCAATATTCGGCT-AACCATCCGTGGTATTGTTCCCTGGAA  49

seq1  TGA-CTTTATTCA-CCATACTTAAAAAA---TATTGCTGAAATACAATTC  94
      ||| | | ||||| |||||| |||| ||    | ||||||||||||||||
seq2  TGACCGTAATTCACCCATACGTAAAGAAAGTAAATGCTGAAATACAATTC  99

seq1  ATGTTTAAATCTTATTACTAGG-CCAAAC-TACATATACTAAGTAAATAA  142
      | |||||||||| || | |||| |||||| ||||||||||||||||||||
seq2  A-GTTTAAATCTGATAAGTAGGCCCAAACTTACATATACTAAGTAAATAA  148

seq1  ATAAACAAAA-TTAT-ATAT-ATTCCAACTTTCTTATGTGAAT-CAAAAA  188
      |||||||||| |||| |||| |||||||||||||||||||||| ||||||
seq2  ATAAACAAAACTTATAATATAATTCCAACTTTCTTATGTGAATCCAAAAA  198

seq1  AATCTGAAGTA-CAAATTTATAGCTTAAAATGTATAAATAA-TAAGGCCA  236
      ||||||||||| |||||||||||||| |||||||||||||| ||||||||
seq2  AATCTGAAGTACCAAATTTATAGCTT-AAATGTATAAATAATTAAGGCCA  247

seq1  GTATTGTAGATCAGTAGGGGAAAATCATTTTCTGCCAAGAATGAAGAACT  286
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGTAGATCAGTAGGGGAAAATCATTTTCTGCCAAGAATGAAGAACT  297

seq1  GATTTCCAGACTC-AGAATTCATTTATTAGAATG-AAAAAAGTATCTCAG  334
      ||||||||||||| |||||||||||||||||||| |||||||||||||||
seq2  GATTTCCAGACTCAAGAATTCATTTATTAGAATGAAAAAAAGTATCTCAG  347

seq1  AAGTTATTTTCTAACATACACCTGTGAGATGTAAAGCCCATATACATACA  384
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTATTTTCTAACATACACCTGTGAGATGTAAAGCCCATATACATACA  397

seq1  CCCATAAACTATCAAATAAACTAATTAATTAAATTAATGAAAAGATGGAG  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATAAACTATCAAATAAACTAATTAATTAAATTAATGAAAAGATGGAG  447

seq1  AAATAGTAACAAGCTATGTATTACTTCTTGATTTCTATCATACAGAAATA  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGTAACAAGCTATGTATTACTTCTTGATTTCTATCATACAGAAATA  497

seq1  TTTCCATGTAGCTTTATGGTACATTGCTTATTTGCATTCTTAGAAAAAAA  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATGTAGCTTTATGGTACATTGCTTATTTGCATTCTTAGAAAAAAA  547

seq1  TGGGAATATAATTTTTGAGCTACTTAGGAGAGGTATGATTATGAACACAT  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAATATAATTTTTGAGCTACTTAGGAGAGGTATGATTATGAACACAT  597

seq1  ATATTCTTTTGAAATTTATGTAAGTAGTGCTTACTGCAATTAGAAAACAA  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCTTTTGAAATTTATGTAAGTAGTGCTTACTGCAATTAGAAAACAA  647

seq1  AACAAAACAACAATAACAACAACAACAAAGCTAGTACAAGACCTTCTTAC  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAACAACAATAACAACAACAACAAAGCTAGTACAAGACCTTCTTAC  697

seq1  AATTCTTAAAGAAGTATTAAATTTTCAGGGGCTGATAGATATAAATTATG  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTAAAGAAGTATTAAATTTTCAGGGGCTGATAGATATAAATTATG  747

seq1  TATCTGTTACTATGATAAAGGGCACACGATAAGTAAAGTGAGATGAGCCA  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGTTACTATGATAAAGGGCACACGATAAGTAAAGTGAGATGAGCCA  797

seq1  CCCATTTTGATCTCATTTTCAATGGTATCTATCCATGACCAAGTTCCCCA  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTTTGATCTCATTTTCAATGGTATCTATCCATGACCAAGTTCCCCA  847

seq1  CCATTTTGGGCTTGTGGTGAGGCTCAGCATCATGTTGAAGAGCATGGTCT  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTGGGCTTGTGGTGAGGCTCAGCATCATGTTGAAGAGCATGGTCT  897

seq1  AAGTAAGATTCTCATCTTACAATGCCCTGAAAACCAAACAGAAAAAGAGA  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAGATTCTCATCTTACAATGCCCTGAAAACCAAACAGAAAAAGAGA  947

seq1  GAGAGAGATGAGACCATGGTAACCCCTCTAAAGACACCTCCTCAGTGAGC  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGATGAGACCATGGTAACCCCTCTAAAGACACCTCCTCAGTGAGC  997

seq1  CTAGTTCCTTCCACTAAGCTCTACCTCCTAAATCTTTCTTCCTTACCCTT  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTCCTTCCACTAAGCTCTACCTCCTAAATCTTTCTTCCTTACCCTT  1047

seq1  CACTAATGAAAAAGACATAGATATATGGGGCCTTGAGAGATATTTAACAC  1084
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAATGAAAAAGACATAGATATATGGGGCCTTGAGAGATATTTAACAC  1097

seq1  GCAAAGATTAGCATAATCATCCTGAATTATGGAATTC  1121
      |||||||||||||||||||||||||||||||||||||
seq2  GCAAAGATTAGCATAATCATCCTGAATTATGGAATTC  1134


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