BAC Information

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BAC

Clone NameB6Ng01-261H21
Chromosome3 (Build37)
Map Location 110,351,405 - 110,352,556
singlet/doubletsinglet
Overlap genenone
Upstream geneVav3, Ntng1, LOC100043181, LOC100043183, Prmt6
Downstream geneLOC100043190, LOC668712
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-261H21.bB6Ng01-261H21.g
ACCGA066149GA066150
length1,1541,163
definitionB6Ng01-261H21.b B6Ng01-261H21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatttctgtaattatatgtccagtttaccctacattaacaaggta
ttatttaaccaaagatttctgctctactcagcttatagtttatataaaat
gcctttcctatactagactctttagggtaaagaaagctcatatataaact
acaaccatagctttaataactaaaggcaatagtgaaagctgaatttcttt
tttgaaaagaaaaatattatcttggatctgaagctaatctaaaacttatt
tcatgaatttattgatttttctgttcccttcagacattagccagctaaag
tcattacacacacattaattataccaattagtcccaacttacatatgtat
acattcaagacttgattatggagctaaatgtagttaggcatggcaaaaat
aatacacatgagcaaaacttctaattcccttggatactgaactgatgaat
acattatacattttggcatagctaagtgatctcattatatttgcttaatt
taataatgcaattgccttatattttctcatttcatcaggtaatggcagag
agagcaggtctttatttataatggacactggaaaggccatttttccccag
tgaaagttctaattgcaggttaacttgtagtcttctgcacatttctttaa
gtttaaatgtgagattttcttagagctggacactagccatactgctttca
tgctctccaactttaacaacatacaggagaaaacagtgatcacagaatta
cagaaaacactgtcattcaactgccatgaatcagaagctaaaggccccag
gctttctctcaagtaatcccaatttccacatctttgaattagctttttga
aagatttactaattttcatcacaatatattaggtaatatataatggcgca
gtagttaccaaacaatggtggaaaaaaataagtatgttggaaggttcagg
aaaaggttctgggtccctactttctgggcttctggttcgggtagttaaag
atgggttgcaaaacttacaggagttatcaaggcgatggtgatgcagacag
tggacaaaatggtctccaggtgcttggcaatacaggaagtggatacctca
caatggatatgggacagaagcacaggtccccaatgaggagctagagaaag
tacc
gaattcttacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcaggaaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggagacagc
agatgctggtgtggatgtggagaaagaggaacactcctccattgttggtg
tgattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atttatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagacgaacggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatttccaagatataaggtacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcataccctagcaagattttatcgaaa
ggacccagatgtagctatctcttgtgagactatgcccggggccctagcaa
acacagaagtggttgctcacagtcagctaatggatggatcacagggctcc
caatgaggaggtagagaaagaccagagctaaagggatctgcacctaatag
tgacacatatgactacagtaccccggagctctggactcttagctgcatat
gttacaaaagatggctattcgcatcacttggaagagaagtccaatggaac
cgtacctttgtatgccagttcagatgccagctaatgatgtgtgctagaga
tcccaatctcact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_110351405_110352556
seq2: B6Ng01-261H21.b_45_1198 (reverse)

seq1  GGTACTTTCTCTAGCTCCTTCATTGGGGACCTTGTGC-TCTGTCCAATAT  49
      |||||||||||||||||| |||||||||||| ||||| ||||||| ||||
seq2  GGTACTTTCTCTAGCTCC-TCATTGGGGACC-TGTGCTTCTGTCCCATAT  48

seq1  CCATTGTGA-GTATCCACTT-CTGTATTTGCCAAGCACTGGAAGACCATT  97
      ||||||||| |||||||||| ||||| |||||||||||  | ||||||||
seq2  CCATTGTGAGGTATCCACTTCCTGTA-TTGCCAAGCACCTGGAGACCATT  97

seq1  TTGTCAACTGTCTGCATCACCATCG-CTTGATAACT-CTGTAAGTTTTGC  145
      ||||| ||||||||||||||||||| |||||||||| |||||||||||||
seq2  TTGTCCACTGTCTGCATCACCATCGCCTTGATAACTCCTGTAAGTTTTGC  147

seq1  AACCCATCTTTAACTAACCGAACCAGAAGCCCAGAAAGTAGGGACCCAGA  195
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AACCCATCTTTAACTACCCGAACCAGAAGCCCAGAAAGTAGGGACCCAGA  197

seq1  ACCTTTTCCTGAACCTTCCAACATACTTATTTTTTTCCACCATTGTTTGG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTTCCTGAACCTTCCAACATACTTATTTTTTTCCACCATTGTTTGG  247

seq1  TAACTACTGCGCCATTATATATTACCTAATATATTGTGATGAAAATTAGT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTACTGCGCCATTATATATTACCTAATATATTGTGATGAAAATTAGT  297

seq1  AAATCTTTCAAAAAGCTAATTCAAAGATGTGGAAATTGGGATTACTTGAG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTTCAAAAAGCTAATTCAAAGATGTGGAAATTGGGATTACTTGAG  347

seq1  AGAAAGCCTGGGGCCTTTAGCTTCTGATTCATGGCAGTTGAATGACAGTG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGCCTGGGGCCTTTAGCTTCTGATTCATGGCAGTTGAATGACAGTG  397

seq1  TTTTCTGTAATTCTGTGATCACTGTTTTCTCCTGTATGTTGTTAAAGTTG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGTAATTCTGTGATCACTGTTTTCTCCTGTATGTTGTTAAAGTTG  447

seq1  GAGAGCATGAAAGCAGTATGGCTAGTGTCCAGCTCTAAGAAAATCTCACA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCATGAAAGCAGTATGGCTAGTGTCCAGCTCTAAGAAAATCTCACA  497

seq1  TTTAAACTTAAAGAAATGTGCAGAAGACTACAAGTTAACCTGCAATTAGA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACTTAAAGAAATGTGCAGAAGACTACAAGTTAACCTGCAATTAGA  547

seq1  ACTTTCACTGGGGAAAAATGGCCTTTCCAGTGTCCATTATAAATAAAGAC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCACTGGGGAAAAATGGCCTTTCCAGTGTCCATTATAAATAAAGAC  597

seq1  CTGCTCTCTCTGCCATTACCTGATGAAATGAGAAAATATAAGGCAATTGC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTCTCTGCCATTACCTGATGAAATGAGAAAATATAAGGCAATTGC  647

seq1  ATTATTAAATTAAGCAAATATAATGAGATCACTTAGCTATGCCAAAATGT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTAAATTAAGCAAATATAATGAGATCACTTAGCTATGCCAAAATGT  697

seq1  ATAATGTATTCATCAGTTCAGTATCCAAGGGAATTAGAAGTTTTGCTCAT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTATTCATCAGTTCAGTATCCAAGGGAATTAGAAGTTTTGCTCAT  747

seq1  GTGTATTATTTTTGCCATGCCTAACTACATTTAGCTCCATAATCAAGTCT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATTATTTTTGCCATGCCTAACTACATTTAGCTCCATAATCAAGTCT  797

seq1  TGAATGTATACATATGTAAGTTGGGACTAATTGGTATAATTAATGTGTGT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGTATACATATGTAAGTTGGGACTAATTGGTATAATTAATGTGTGT  847

seq1  GTAATGACTTTAGCTGGCTAATGTCTGAAGGGAACAGAAAAATCAATAAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGACTTTAGCTGGCTAATGTCTGAAGGGAACAGAAAAATCAATAAA  897

seq1  TTCATGAAATAAGTTTTAGATTAGCTTCAGATCCAAGATAATATTTTTCT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGAAATAAGTTTTAGATTAGCTTCAGATCCAAGATAATATTTTTCT  947

seq1  TTTCAAAAAAGAAATTCAGCTTTCACTATTGCCTTTAGTTATTAAAGCTA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAAAAGAAATTCAGCTTTCACTATTGCCTTTAGTTATTAAAGCTA  997

seq1  TGGTTGTAGTTTATATATGAGCTTTCTTTACCCTAAAGAGTCTAGTATAG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGTAGTTTATATATGAGCTTTCTTTACCCTAAAGAGTCTAGTATAG  1047

seq1  GAAAGGCATTTTATATAAACTATAAGCTGAGTAGAGCAGAAATCTTTGGT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGCATTTTATATAAACTATAAGCTGAGTAGAGCAGAAATCTTTGGT  1097

seq1  TAAATAATACCTTGTTAATGTAGGGTAAACTGGACATATAATTACAGAAA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAATACCTTGTTAATGTAGGGTAAACTGGACATATAATTACAGAAA  1147

seq1  TGAATTC  1152
      |||||||
seq2  TGAATTC  1154