BAC Information

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BAC

Clone NameB6Ng01-262C10
Chromosome3 (Build37)
Map Location 93,673,737 - 93,674,105
singlet/doubletsinglet
Overlap genenone
Upstream geneLce3a, Lce3b, Lce3c, LOC630994, 2310001H18Rik, Lce3f, Crct1, Lce1m, EG229571, Crnn, EG229574, EG668300, LOC668304, Flg, LOC100042701, Hrnr, Rptn, EG383891, Tchh, Tchhl1, S100a11, S100a10, EG433623, Tdpoz2, Tdpoz1, LOC668325, LOC545550, EG436563, Tdpoz4, Tdpoz3
Downstream geneEG668341, LOC668344, EG668346, Tdpoz5, EG668353, EG668356, LOC668359, LOC100042761, LOC433624, LOC668367, LOC433625, LOC100043188, EG383977, EG245290, EG668385, EG212727, Them4, Them5, Gm659, Rorc, Lingo4, Tdrkh, Oaz3, Mrpl9, LOC668403, 2310007A19Rik, Tnrc4, Snx27, LOC100043228, EG668409, Tuft1, LOC100042793, BC021767, Selenbp2, LOC100042801, Cgn, Pogz
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-262C10.bB6Ng01-262C10.g
ACCGA066644GA066645
length1,245363
definitionB6Ng01-262C10.b B6Ng01-262C10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctcagaaaagtaggaatcagtttacctcaagacccacctatatt
actgttgggcatatatccaaaggatggttctctctaccacagagatcttg
atcaaccatatttattgcttccttattcctcatggccagaaattagaaac
ctgactaaagataatgtggtacattctcaaattggtgtgttactcagcta
ttaaaaaaaaataatgatgatgatgatgataataataataataataataa
taataataataatgataataattggaggacacaaggcctgggctaacaca
atgtgctacaatctaatcatggatctgatgctttgagatggtccacccca
caatgtactccatctatcatctcctggaggtcatggaggaaccaagtgca
tatgtaatagaggcccactttgtctggcctctgtggaaaaggagtgccta
atcttggagagacttaatgccccaagaaggggaagtgctgtggggcaccc
tctcagaggcaaaggggatgtggaaggactaaagaaatctgagagagtta
ctgggatggggcaacatttgggatgcaaattaataaaataaataatgaaa
aaacaagaagccagaatacggagaaaagaaatagagaaggtaggttttcc
aggagagtttttcagagacaggaagaagatagaacaatggagacacagtg
tatagaaagaaagaatgagtcagatacccagaaagatccagaagagtaga
acagattgtcaaaattagtatgaggccaagcagagcatttcaggaaaaac
agaaagaacacagaaagaacacctggagaggagccttaaatcaaccaact
agcgctcagaaagacctaggaaggagtgagctttattcagatataaatct
cagatgctgaaaacatttctaagggtcgaatagattttacagaaactcaa
cgcttccagggctaggccaaggttgacatggtggaggcagaaagcctcag
aaatgttaataatatagatgataatagttacttttacataacatgtagaa
aggtcactgctagatcaactctggaggtagtctggtcaaggcattcttca
gttagaaatcatgttcttagaaactgtggaaaatgtgatctaggctttga
gaacccggattctaggtctcttgtactccacatttcttaaacacctggag
tgaagagagtcacgtgtaacgttttaatatataggcaactatagg
ataaaacactgggaatttagcagagggaggaaagcccttcaggagtcatc
aaatctagggacttgtgcaatgtggtcctctgtagtgcaggggtgagtga
ctcagttgcccacagctatgatgggtgctaatgagtgcttcctttgccta
gaattatgctccttacctgttagtattttcagagagaactgtagtaaata
cattaagtatgcattggtactttcttactcataagctgctgctgtgtgtt
ttttaaatatctaacccttcaaagtttcccttgcccttaaccaaaatggc
cctgaatgttgtctggagctttgaagacaaagatggcagtggcgggggtg
ggggaggggagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_93673737_93674105
seq2: B6Ng01-262C10.g_67_435

seq1  GAATTCATAAAACACTGGGAATTTAGCAGAGGGAGGAAAGCCCTTCAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAAAACACTGGGAATTTAGCAGAGGGAGGAAAGCCCTTCAGGA  50

seq1  GTCATCAAATCTAGGGACTTGTGCAATGTGGTCCTCTGTAGTGCAGGGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCAAATCTAGGGACTTGTGCAATGTGGTCCTCTGTAGTGCAGGGGT  100

seq1  GAGTGACTCAGTTGCCCACAGCTATGATGGGTGCTAATGAGTGCTTCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGACTCAGTTGCCCACAGCTATGATGGGTGCTAATGAGTGCTTCCTT  150

seq1  TGCCTAGAATTATGCTCCTTACCTGTTAGTATTTTCAGAGAGAACTGTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTAGAATTATGCTCCTTACCTGTTAGTATTTTCAGAGAGAACTGTAG  200

seq1  TAAATACATTAAGTATGCATTGGTACTTTCTTACTCATAAGCTGCTGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATACATTAAGTATGCATTGGTACTTTCTTACTCATAAGCTGCTGCTG  250

seq1  TGTGTTTTTTAAATATCTAACCCTTCAAAGTTTCCCTTGCCCTTAACCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTTTTAAATATCTAACCCTTCAAAGTTTCCCTTGCCCTTAACCAA  300

seq1  AATGGCCCTGAATGTTGTCTGGAGCTTTGAAGACAAAGATGGCAGTGGCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCCCTGAATGTTGTCTGGAGCTTTGAAGACAAAGATGGCAGTGGCG  350

seq1  GGGGTGGGGGAGGGGAGAT  369
      |||||||||||||||||||
seq2  GGGGTGGGGGAGGGGAGAT  369