BAC Information

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BAC

Clone NameB6Ng01-262N02
Chromosome3 (Build37)
Map Location 75,126,188 - 75,127,332
singlet/doubletsinglet
Overlap geneWdr49
Upstream geneLOC667434, LOC100041551, EG667459, BC050789, Serpini2
Downstream genePdcd10, Serpini1, Golph4, Fstl5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-262N02.bB6Ng01-262N02.g
ACCGA067136GA067137
length1,1411,077
definitionB6Ng01-262N02.b B6Ng01-262N02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttaattctttacctctcttcatatttatactctctgtctccatc
tatctctttctccccacccactgtctctttatgtctgtcaaggatgccct
gacaagctcctgtcatgcaaaccaaattgttcttgaattgaaaatccttc
tggcccagtctcctgattgttttcaggattacaggtattcatttcaaatc
tgtgttgtctaatctttttttcttaaattgttttaaatgttttattaaaa
tatagctacatcattttcccctttccccttcttcattgctccacctccaa
ttcatggccattttcccccttgctaattccttttgcacttctatttctac
tctatcttcaaactatgagaaattgtccctctcattgtaacagtttgtct
ctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgttaatca
atttcctatttttactgtcatgtacattcctatttattgatttacctgtc
atttattattcacctgcctactgttaatccttttatttgtcattccatct
gcccattattcaccacttactatcatcttagaatatttgttggattttac
taccatctttggtaaaatataaaggaatttgaataaaacatgttccaaga
acttaacttgaattctatgacactctccttaagtttctacccttactctg
ttgatcagatttatcatttctccatattactcatcaagaccccattccta
ttgtctacttgctcttgaaggcaaggaagttttagtatttatttaggttt
tatttcctgtactcttaactcctgctttcacaatttcacattcaattaca
aattgcaatacacaaaaagatgattctttctattctttctttttgaactg
tttatcatatatatttggtttataaaatttcaaggaaaagtaataaaagt
acctctgtatccttcagcctatccctcacactgtcttatgttcatactga
acagttgttatcattgatgggataaacattacactgttcattaaacttca
tagactaaagctcatttgtattgttaaacaatcctggtgggctttcatct
cattcttagctgcagaatcctctgcatgtgctgaaatatgg

gaattctctgtttagatatgtactcattttttaattgaataatttgggtc
ttcttaatatatagtttcctgagttatttatatatctcaaatattagtct
tctataggctatgaagttggtgacatttttccaattctatatcttctcat
tttttcctattgatggtgttgtttcccttatagaaccttttcagtttcat
gaggttccttgtattgattgttgttcctagcgcctgtactatcagtgttc
tattcaggaagttgtctcccatgcaaatgcattcaagcttattccccact
ttctcttaccaagttcttagtatctggttttatattgagatctttgacct
tcttggactcgagttttatgcagggtaataaatatggatctatttgcatt
tttcttacatgcagataaacagttagaccagtaccatttgttgaagatgc
tttcttttgttcatttttaatttattatttattattattatttattttgt
gatgtttttccattgtatatttctggcttctttgttaaaaaaaaaaaaaa
ggtaaccataggtgtatgggtttatatgtctttgatttgatcccattgat
caatgtgcctgtgtttatgcaaatgtgtggtttttattgctatagctctg
tagtacaggtttaaatcagagatggtgatacctctggaagttcttttatt
cttcagaattgatttagctatcctgggttttgtgtttttccatataaaat
taaggattgtcctttaaaggcctgtgaagaattgggttggaattttgatg
gggtttgcattgaaatgtagattgcttttgttgagatggacatatattga
ttttcctgatcatgagcatggggatctttccatctctaatatctcttcaa
attctttcctcaagacttaaagtttatcatacaaattatttcacttgctt
cataagaattacccaaatactttatatattatgtgtgccttttgtgacga
tgtattcactgatctttctccgtcttgccatgggtaagaaggctatgatt
ttgtcttttatgagtatactcctacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_75126188_75127332
seq2: B6Ng01-262N02.b_43_1183 (reverse)

seq1  CCATAGTTCAGCACAATGCAGAGGATACTGCAGCTAAGAATGGAGAATGA  50
      ||||| |||||||| ||||||||||| |||||||||||||| ||| ||| 
seq2  CCATATTTCAGCAC-ATGCAGAGGATTCTGCAGCTAAGAAT-GAG-ATG-  46

seq1  AAAGCCCACAGGAATTGTTTAACATAACAAATGAGCTTTAGTCTATGAAG  100
      |||||||||  | |||||||||||  ||||||||||||||||||||||||
seq2  AAAGCCCACCAGGATTGTTTAACAATACAAATGAGCTTTAGTCTATGAAG  96

seq1  TTTAATGAACAGTGTTAATGTTTAT-CCATCAATGATAACAACTGTTCAG  149
      |||||||||||||| |||||||||| ||||||||||||||||||||||||
seq2  TTTAATGAACAGTG-TAATGTTTATCCCATCAATGATAACAACTGTTCAG  145

seq1  TATGAACATAAGACAGTGTGAGGGATAGGCTGAAGGATACAGAGGTACTT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAACATAAGACAGTGTGAGGGATAGGCTGAAGGATACAGAGGTACTT  195

seq1  TTATTACTTTTCCTTGAAATTTTATAAACCAAATATATATGATAAACAGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTACTTTTCCTTGAAATTTTATAAACCAAATATATATGATAAACAGT  245

seq1  TCAAAAAGAAAGAATAGAAAGAATCATCTTTTTGTGTATTGCAATTTGTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAAGAAAGAATAGAAAGAATCATCTTTTTGTGTATTGCAATTTGTA  295

seq1  ATTGAATGTGAAATTGTGAAAGCAGGAGTTAAGAGTACAGGAAATAAAAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAATGTGAAATTGTGAAAGCAGGAGTTAAGAGTACAGGAAATAAAAC  345

seq1  CTAAATAAATACTAAAACTTCCTTGCCTTCAAGAGCAAGTAGACAATAGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATAAATACTAAAACTTCCTTGCCTTCAAGAGCAAGTAGACAATAGG  395

seq1  AATGGGGTCTTGATGAGTAATATGGAGAAATGATAAATCTGATCAACAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGGTCTTGATGAGTAATATGGAGAAATGATAAATCTGATCAACAGA  445

seq1  GTAAGGGTAGAAACTTAAGGAGAGTGTCATAGAATTCAAGTTAAGTTCTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGGTAGAAACTTAAGGAGAGTGTCATAGAATTCAAGTTAAGTTCTT  495

seq1  GGAACATGTTTTATTCAAATTCCTTTATATTTTACCAAAGATGGTAGTAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACATGTTTTATTCAAATTCCTTTATATTTTACCAAAGATGGTAGTAA  545

seq1  AATCCAACAAATATTCTAAGATGATAGTAAGTGGTGAATAATGGGCAGAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAACAAATATTCTAAGATGATAGTAAGTGGTGAATAATGGGCAGAT  595

seq1  GGAATGACAAATAAAAGGATTAACAGTAGGCAGGTGAATAATAAATGACA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGACAAATAAAAGGATTAACAGTAGGCAGGTGAATAATAAATGACA  645

seq1  GGTAAATCAATAAATAGGAATGTACATGACAGTAAAAATAGGAAATTGAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAATCAATAAATAGGAATGTACATGACAGTAAAAATAGGAAATTGAT  695

seq1  TAACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGAGAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGACAGAGAC  745

seq1  AAACTGTTACAATGAGAGGGACAATTTCTCATAGTTTGAAGATAGAGTAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTTACAATGAGAGGGACAATTTCTCATAGTTTGAAGATAGAGTAG  795

seq1  AAATAGAAGTGCAAAAGGAATTAGCAAGGGGGAAAATGGCCATGAATTGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGAAGTGCAAAAGGAATTAGCAAGGGGGAAAATGGCCATGAATTGG  845

seq1  AGGTGGAGCAATGAAGAAGGGGAAAGGGGAAAATGATGTAGCTATATTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGAGCAATGAAGAAGGGGAAAGGGGAAAATGATGTAGCTATATTTT  895

seq1  AATAAAACATTTAAAACAATTTAAGAAAAAAAGATTAGACAACACAGATT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAACATTTAAAACAATTTAAGAAAAAAAGATTAGACAACACAGATT  945

seq1  TGAAATGAATACCTGTAATCCTGAAAACAATCAGGAGACTGGGCCAGAAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGAATACCTGTAATCCTGAAAACAATCAGGAGACTGGGCCAGAAG  995

seq1  GATTTTCAATTCAAGAACAATTTGGTTTGCATGACAGGAGCTTGTCAGGG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTCAATTCAAGAACAATTTGGTTTGCATGACAGGAGCTTGTCAGGG  1045

seq1  CATCCTTGACAGACATAAAGAGACAGTGGGTGGGGAGAAAGAGATAGATG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTGACAGACATAAAGAGACAGTGGGTGGGGAGAAAGAGATAGATG  1095

seq1  GAGACAGAGAGTATAAATATGAAGAGAGGTAAAGAATTAAGAATTC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGAGAGTATAAATATGAAGAGAGGTAAAGAATTAAGAATTC  1141


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