BAC Information

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BAC

Clone NameB6Ng01-263I02
Chromosome3 (Build37)
Map Location 55,822,799 - 55,823,929
singlet/doubletsinglet
Overlap genenone
Upstream geneCcna1, 4931419H13Rik, Spg20, A730037C10Rik, Sohlh2, Dclk1, Mab21l1, 4933417G07Rik
Downstream geneLOC100040139
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263I02.bB6Ng01-263I02.g
ACCGA067656GA067657
length1,1471,058
definitionB6Ng01-263I02.b B6Ng01-263I02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaaacttacataatcacataaactatctgctgttgccaatacca
tgccctgctccagggaaatcagtcagcggctgtggacaatctgaaatagc
cccataccctacacatggggttaaataacatagtcttataatatttctgt
gtttttttaagaaactaacattcccaaattgtcattacacagaactatct
ggccagggggtggcactgcccacagtggcctagaaacttccatatcaatc
actaatcaagaacgcacctcccacagcacaatcttaggcatgtcctcagt
aagatgctctttccccagatatgtctaggtttgtgtcaagttgacaaaag
ctaaccagctcagtattcatccgtatctgtagtgacagagacactaactg
gtgtaggaggtgatccccatcatgtaaacaggaggtttccagcacataca
ctaagaatttctgtcaggttgttgttgttgttactttacctcataaagtg
tgttgtatgtagtgacagtcacagtgtttgtatgcagcatcagcctttct
ccaagaagagtgaagagactatgggtatgcataatttcaacctttcgcct
ggaatggagataaacactatcagatacagtggagtctatgaccacatgac
tctgcactaaaaaacaccccacacaaacagatgcagaatcatacaattaa
tagctttatcaatatctacaaaaagaagcaacagtttataacacagctat
ttgctaacatcctacaactttatttaaacagttctcaaggaaattctcca
ttcaattaaaatacgagacacattcaagttacataaccatatgtaatgac
tgggagttgttatttccagattctagtaattgcctaaaaggattttagat
tttcaaccctaacacacagaatacataattccaagtctgtaatatggtct
gtaacaaatcttaacataaaaaacaatcgaaaagatggttaaaaaaaaaa
aaaaggaaagaaaagaaaccataagttgaacccatgggacttgatgttgg
aagtcacaagaagaagaattcctgcgttctcttcagtgcttacggtcttg
caagtggcccacaagaatcaaatgacactggctcctatgtttctcca

gaattcaggaggcctggctcaagatgtttcagaagagaataatgttagta
tttggtctagagaatgtttttctaatattttagtgaagaatgtggctgct
ttgtctgaaaagtctgtccaaggctaaagttaaattttgatcaattgcat
tagcaaatgaaatctcaaaacagcctagcataaattttgttgtgtggtta
ctggatgttcactcttatgatctgcagtttgattaaaaggagcaaggaga
gcaagggaaaataaaaattgtatagttcaaagattaaagggacaccagga
agtggaatggagtcaaatcctgtgtttaaggctattaaacggaattaagg
aagtggtgctcttggggcaaaatcccaccctgctaaacttaatgtttata
catttgtagttgatgttgggatatcatgttaattgttattatgacctagg
tagtgttttcatttggacataaggagatatgatgtgtgtaaaatcgataa
gggatgaatcgtgatgcctattcttgattgtcagcttcactatatctcat
ttgaactacagttcagaagcatagtgggcatgcttataaaaatcttgtga
aaaggaattaaagaaaaccttaggtccaggcatggcagaacatgccttta
atcacaggagacaggggcaagcaaatctttgagttaaactccagcctggt
acactgcaagtttcaggcaaagaaaaggttaggtccagtcttggtacaca
cctgtaatcctagcactcaggagacagaggtatgaagatctctgagttta
agtcagtttatatagcaaatgtcttagacagccaagactaggaaacggag
cttgaaaacagaaagttggtgaagatataatagaacaagggggccatgtt
ccagcccagcaagcaacagaactgggcagcttcttgccttcattgcttct
ggctttagagtcagaatagtaagggattactgggataatttaatgctggt
atttggagctaaaaattacttgtgaataaaaagagagcacttcactgaag
gggaattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_55822799_55823929
seq2: B6Ng01-263I02.b_48_1194

seq1  GAATTCTAAACTTACATAATCACATAAACTATCTGCTGTTGCCAATACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAACTTACATAATCACATAAACTATCTGCTGTTGCCAATACCA  50

seq1  TGCCCTGCTCCAGGGAAATCAGTCAGCGGCTGTGGACAATCTGAAATAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTGCTCCAGGGAAATCAGTCAGCGGCTGTGGACAATCTGAAATAGC  100

seq1  CCCATACCCTACACATGGGGTTAAATAACATAGTCTTATAATATTTCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATACCCTACACATGGGGTTAAATAACATAGTCTTATAATATTTCTGT  150

seq1  GTTTTTTTAAGAAACTAACATTCCCAAATTGTCATTACACAGAACTATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTTAAGAAACTAACATTCCCAAATTGTCATTACACAGAACTATCT  200

seq1  GGCCAGGGGGTGGCACTGCCCACAGTGGCCTAGAAACTTCCATATCAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGGGGGTGGCACTGCCCACAGTGGCCTAGAAACTTCCATATCAATC  250

seq1  ACTAATCAAGAACGCACCTCCCACAGCACAATCTTAGGCATGTCCTCAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATCAAGAACGCACCTCCCACAGCACAATCTTAGGCATGTCCTCAGT  300

seq1  AAGATGCTCTTTCCCCAGATATGTCTAGGTTTGTGTCAAGTTGACAAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGCTCTTTCCCCAGATATGTCTAGGTTTGTGTCAAGTTGACAAAAG  350

seq1  CTAACCAGCTCAGTATTCATCCGTATCTGTAGTGACAGAGACACTAACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACCAGCTCAGTATTCATCCGTATCTGTAGTGACAGAGACACTAACTG  400

seq1  GTGTAGGAGGTGATCCCCATCATGTAAACAGGAGGTTTCCAGCACATACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGGAGGTGATCCCCATCATGTAAACAGGAGGTTTCCAGCACATACA  450

seq1  CTAAGAATTTCTGTCAGGTTGTTGTTGTTGTTACTTTACCTCATAAAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAATTTCTGTCAGGTTGTTGTTGTTGTTACTTTACCTCATAAAGTG  500

seq1  TGTTGTATGTAGTGACAGTCACAGTGTTTGTATGCAGCATCAGCCTTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTATGTAGTGACAGTCACAGTGTTTGTATGCAGCATCAGCCTTTCT  550

seq1  CCAAGAAGAGTGAAGAGACTATGGGTATGCATAATTTCAACCTTTCGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAAGAGTGAAGAGACTATGGGTATGCATAATTTCAACCTTTCGCCT  600

seq1  GGAATGGAGATAAACACTATCAGATACAGTGGAGTCTATGACCACATGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGGAGATAAACACTATCAGATACAGTGGAGTCTATGACCACATGAC  650

seq1  TCTGCACTAAAAAACACCCCACACAAACAGATGCAGAATCATACAATTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCACTAAAAAACACCCCACACAAACAGATGCAGAATCATACAATTAA  700

seq1  TAGCTTTATCAATATCTACAAAAAGAAGCAACAGTTTATAACACAGCTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTTATCAATATCTACAAAAAGAAGCAACAGTTTATAACACAGCTAT  750

seq1  TTGCTAACATCCTACAACTTTATTTAAACAGTTCTCAAGGAAATTCTCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAACATCCTACAACTTTATTTAAACAGTTCTCAAGGAAATTCTCCA  800

seq1  TTCAATTAAAATACGAGACACATTCAAGTTACATAACCATATGTAATGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATTAAAATACGAGACACATTCAAGTTACATAACCATATGTAATGAC  850

seq1  TGGGAGTTGTTATTTCCAGATTCTAGTAATTGCCTAAAAGGATTTTAGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGTTGTTATTTCCAGATTCTAGTAATTGCCTAAAAGGATTTTAGAT  900

seq1  TTTCAACCCTAACACACAGAATACATAATTCCAAGTCTGTAATATGGTCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAACCCTAACACACAGAATACATAATTCCAAGTCTGTAATATGGTCT  950

seq1  GTAACAAATCTTAACAT-AAAAACAATCGAAAAGATGGTTAAAAAAAAAA  999
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GTAACAAATCTTAACATAAAAAACAATCGAAAAGATGGTTAAAAAAAAAA  1000

seq1  AA---GAAAGAAAAAGAAACCATAAAGTGAACCCAT-GGACTTGATGTT-  1044
      ||   ||||| ||||||||||||||  ||||||||| |||||||||||| 
seq2  AAAAGGAAAG-AAAAGAAACCATAAGTTGAACCCATGGGACTTGATGTTG  1049

seq1  GAAGTCACA--GAGAAGAA-TCCTGCG-TCTCTTCAGTGCTTAC-GTC-T  1088
      |||||||||   ||||||| ||||||| |||||||||||||||| ||| |
seq2  GAAGTCACAAGAAGAAGAATTCCTGCGTTCTCTTCAGTGCTTACGGTCTT  1099

seq1  GCAAGT-GCCCAC-AGATCAAAATGACACT-GCT-CTATG-TTCTCCA  1131
      |||||| |||||| |||   |||||||||| ||| ||||| |||||||
seq2  GCAAGTGGCCCACAAGAATCAAATGACACTGGCTCCTATGTTTCTCCA  1147


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