BAC Information

Click to search

BAC

Clone NameB6Ng01-264F17
Chromosome3 (Build37)
Map Location 117,104,460 - 117,105,572
singlet/doubletsinglet
Overlap genenone
Upstream geneCdc14a, Rtcd1, Dbt, LOC100043702, LOC100043705, Lrrc39, A930028L21Rik, Sass6, Hiat1, Slc35a3, Agl, LOC100043710, LOC100043250, Frrs1, Palmd, EG668749, 1700061I17Rik, LOC674908, D3Bwg0562e
Downstream gene4833424O15Rik, EG668759, Snx7, LOC100043260
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-264F17.bB6Ng01-264F17.g
ACCGA068282GA068283
length1,119164
definitionB6Ng01-264F17.b B6Ng01-264F17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgggacagaggaatgaactccaatgaaaggtaatagcctaaat
aagccatttatacttggaaatttggcaaacctagaaaattatagggacac
ataaacataaacatctacaacttaaaacacacacggccagaaaggaagaa
gcctttcttgacatcaaaatgccagaaacacagagaaataacaccaagag
ctgtaaagggaaaacacccaaaaagcttagagaggcagaagtatcagaat
aagagcagatctatcatcaacagccacaaaagctagggaagtgtgaaatg
atatattcttagtcttggaagcaaatagctgccaaccaagactgcaatac
ccaatgaaattatctattaaaacaaaaggatcattaaaactgagcctcaa
ttaaaaccagaaacactcaaggtgctaagggaaacaggggttacatttct
ggacacaggtacaggcaataaacacagccctgaacagaaccagaatggca
cagaagtcaagcacaagagttagcaaatgggacaacgtaaaatttaaaat
cttcttcacagcacaagaaactgaacagaacaaactgacagcctgcagag
taggagaaagtcttttacatctgtacatgggctactatcttgaatataca
aagaactgtgcaagttaaacagcaaagagacaaactgataatcaataaat
acacagtaaagtttcagtagagttttcaaaaaagtgctctgaaaaaaata
gaagaaaagaaaaataaaagaaaaagaagtaaaaatgatctactttttct
ttagtgctcaatatctctagctagcagacaaatccacattcaaattttgt
taagagtctatactagcctcatgagaatagaaaccctcaagacagcaagt
tctggcgaggacattgggaaagaaggatccttgcacactgttaggagtgt
attcaactttaacctagagaggatttcctaacttctgagacctcagatga
acattctgaaaagatctcacattcactgataatcacaattcttctttaag
ctgctccctctgatgttgcatatgatggaagctaaatcaatcaatccatc
catctatctatcatctatc
aagactttacattggttttcctcggtttctccctgctatagaggagagca
gaggagaggagtggaatgaaatggaggataggggagaggaagaaaagaag
agagagaagagtggagaggataagaaaagagaggagaggagaggagagga
gaggagaggagagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_117104460_117105572
seq2: B6Ng01-264F17.b_45_1163

seq1  GAATTCATGGGACAGAGGAATGAACTCCAATGAAAGGTAATAGCCTAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGGGACAGAGGAATGAACTCCAATGAAAGGTAATAGCCTAAAT  50

seq1  AAGCCATTTATACTTGGAAATTTGGCAAACCTAGAAAATTATAGGGACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCATTTATACTTGGAAATTTGGCAAACCTAGAAAATTATAGGGACAC  100

seq1  ATAAACATAAACATCTACAACTTAAAACACACACGGCCAGAAAGGAAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACATAAACATCTACAACTTAAAACACACACGGCCAGAAAGGAAGAA  150

seq1  GCCTTTCTTGACATCAAAATGCCAGAAACACAGAGAAATAACACCAAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTCTTGACATCAAAATGCCAGAAACACAGAGAAATAACACCAAGAG  200

seq1  CTGTAAAGGGAAAACACCCAAAAAGCTTAGAGAGGCAGAAGTATCAGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAAGGGAAAACACCCAAAAAGCTTAGAGAGGCAGAAGTATCAGAAT  250

seq1  AAGAGCAGATCTATCATCAACAGCCACAAAAGCTAGGGAAGTGTGAAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCAGATCTATCATCAACAGCCACAAAAGCTAGGGAAGTGTGAAATG  300

seq1  ATATATTCTTAGTCTTGGAAGCAAATAGCTGCCAACCAAGACTGCAATAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTCTTAGTCTTGGAAGCAAATAGCTGCCAACCAAGACTGCAATAC  350

seq1  CCAATGAAATTATCTATTAAAACAAAAGGATCATTAAAACTGAGCCTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGAAATTATCTATTAAAACAAAAGGATCATTAAAACTGAGCCTCAA  400

seq1  TTAAAACCAGAAACACTCAAGGTGCTAAGGGAAACAGGGGTTACATTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACCAGAAACACTCAAGGTGCTAAGGGAAACAGGGGTTACATTTCT  450

seq1  GGACACAGGTACAGGCAATAAACACAGCCCTGAACAGAACCAGAATGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACAGGTACAGGCAATAAACACAGCCCTGAACAGAACCAGAATGGCA  500

seq1  CAGAAGTCAAGCACAAGAGTTAGCAAATGGGACAACGTAAAATTTAAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTCAAGCACAAGAGTTAGCAAATGGGACAACGTAAAATTTAAAAT  550

seq1  CTTCTTCACAGCACAAGAAACTGAACAGAACAAACTGACAGCCTGCAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCACAGCACAAGAAACTGAACAGAACAAACTGACAGCCTGCAGAG  600

seq1  TAGGAGAAAGTCTTTTACATCTGTACATGGGCTACTATCTTGAATATACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGAAAGTCTTTTACATCTGTACATGGGCTACTATCTTGAATATACA  650

seq1  AAGAACTGTGCAAGTTAAACAGCAAAGAGACAAACTGATAATCAATAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACTGTGCAAGTTAAACAGCAAAGAGACAAACTGATAATCAATAAAT  700

seq1  ACACAGTAAAGTTTCAGTAGAGTTTTCAAAAAAGTGCTCTGAAAAAAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGTAAAGTTTCAGTAGAGTTTTCAAAAAAGTGCTCTGAAAAAAATA  750

seq1  GAAGAAAAGAAAAATAAAAGAAAAAGAAGTAAAAATGATCTACTTTTTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAAGAAAAATAAAAGAAAAAGAAGTAAAAATGATCTACTTTTTCT  800

seq1  TTAGTGCTCAATATCTCTAGCTAGCAGACAAATCCACATTCAAATTTTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGCTCAATATCTCTAGCTAGCAGACAAATCCACATTCAAATTTTGT  850

seq1  TAAGAGTCTATACTAGCCTCATGAGAATAGAAACCCTCAAGACAGCAAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGTCTATACTAGCCTCATGAGAATAGAAACCCTCAAGACAGCAAGT  900

seq1  TCTGGCGAGGACATTGGGAAAGAAGGATCCTTGCACACTGTTAGGAGTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCGAGGACATTGGGAAAGAAGGATCCTTGCACACTGTTAGGAGTGT  950

seq1  ATTCAACTTTAACCTAGAGAGGATTTCCTAACTTCTGAGACCTCAGATGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAACTTTAACCTAGAGAGGATTTCCTAACTTCTGAGACCTCAGATGA  1000

seq1  ACATTCTGAAAAGATCTCCAACAATTCCACTGAT-ATCACAATTC-TCTT  1048
      ||||||||||||||||||  |||  | ||||||| |||||||||| ||||
seq2  ACATTCTGAAAAGATCTC--ACA--TTCACTGATAATCACAATTCTTCTT  1046

seq1  TAGGCTGCTCCCTCTTGGATGTTGCATATGATGGAGCTTAAATCATATCT  1098
      || ||||||||||||  ||||||||||||||||||   ||||||| ||| 
seq2  TAAGCTGCTCCCTCT--GATGTTGCATATGATGGAAGCTAAATCA-ATCA  1093

seq1  ATCTATCTATCTATC-----------  1113
      ||| ||| |||||||           
seq2  ATCCATCCATCTATCTATCATCTATC  1119