BAC Information

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BAC

Clone NameB6Ng01-265D21
Chromosome3 (Build37)
Map Location 91,376,661 - 91,377,774
singlet/doubletsinglet
Overlap genenone
Upstream geneEG628324, S100a3, S100a4, S100a5, S100a6, S100a7a, S100a8, S100a9, LOC668165, LOC383949, Pglyrp4, LOC329706, EG545541, LOC635737, EG668174, LOC668179, LOC635756, 4930529C04Rik, 9130204L05Rik
Downstream geneLOC100042463, Pglyrp3, EG619750, Lor, A030004J04Rik, Sprr2a, LOC100042999, LOC545543, LOC100043005, LOC545545, LOC100042514, LOC619984, Sprr2b, Sprr2c, Sprr2d, Sprr2e, Sprr2f, Sprr2g, Sprr2h, Sprr2i, Sprr2j, LOC100043022, Sprr2k, Sprr1b, Sprr3, LOC100042575, Sprr1a, Sprr4, LOC100042581, Ivl
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265D21.bB6Ng01-265D21.g
ACCGA068943GA068944
length1,2191,098
definitionB6Ng01-265D21.b B6Ng01-265D21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagttttatgtttgatgccaaattcgttacaaaataacataaaa
ttcttgctagaataggaagccccattatctttcttaataagtttaggcaa
tcccataacactaaaggcttgtaggcaatgatcaattacatttttagagg
cctgtcctgtgtgcagagaagcaaaaggaaatcctgaacaaatgtcaata
caaatgtatatattttaactttccagattccacataatgagttacatcca
tttgccaaatatgattaggcataagacttcatggattaactcctaaatgt
ggcactggagataatgtaatacatgtaggacattgttttacagtatttgg
ctcttttccaaaataagttagtgcctgcttatttccaaggatatccatcg
gagctactgcttcataatatggcaagatattacatttaggagaaatcctc
gaatgtatctacatttgaagagacttttgccataacaatcatgtaggcat
atgaatcgtaataaaaattatcagatgtaaaggcagagagtaatctatgt
aagtgagaaattgctcttcaatagctttttccatttgttgtaaggccagc
aatccttctgaggttaaagatctaggggggcgttggatcacaactccctt
tatgactatcaaacaaaggtttcaactcccttgaagtacactttaaatat
gggcgaagccaattattatcacctaacaattctggaaactcattcaaagt
ccttaagttgtctctgcgaataactatcttctaggggaaaacagcttgat
tagtaagtctaaaacccaaataattataaggatcctgagtttgtatcctt
tcaggagctgtctataatcctttatcagttaaagctttatgtaaacctct
ataacaccaaagcaaatcctgggggtcttttccaggcaacccaggaaaat
ttcttaactttccaaaaacagtcttcttaaaggaacagtatttttcttat
agttgcataagcaattgcaagcttgagaattatagcatctgaggatgaac
attttaagcatgtagctatgagatatataatgacttataatatacactaa
ggtattgattgttcaacattttaaacacaattctacagcacacaatttac
tatcttggctggaacagagaaacttcgaagaaataagtggtgtgaatcca
atttcccacacatataact
gaattcttttcatctttttctctccttataaaaagtgccctccaaagcaa
aggacacattaaaattcatgaatctcaatgcagataattgtctcatttct
gactgattacaaatttttcttctaggtatacttaaggccaaagaaacccc
atgaaatccccaaaacctctaataccattgtgacactgggaatgagagaa
ctgatgcagggagcacactacaatacttccttaaagatgcttctggtacg
cattttatttcaggtaacagtggtataaccttggaaatgaactttagtgc
tggcccttagagaacatctgcaaattatgatcaatattacaattcattta
tccatttcccgaccatattttaaaagatataccgtcatgtaatatggatt
atcagaaggaggttggttgggtaccttcttcacatgtgcaatatattcct
gcatgcattccattcaggttcaattttttctattgcagtgtggattcttt
gattcccatgtctccactaattctccaggaaaccactgaggattatcata
gacagtacttgtttcagctgcccacatcttccctaatgaattcttagttt
tggggtagtactccaattctgtttcaaccataatcataacctccccattt
tatgattcaagaaatgctaaattttccaagtcacccacctatctacttag
tcaatgggaagactaagaggtacataccgagggtggtgttcattatcttc
tgtaaattttaaatgtacatattttgcaagtactgctgcaacagaaaatt
cttcatatagaaacacgaacttaccatggttcagagaatttatttgaatc
ctttaacaagatctagattctgcatagtggactaaaatttgggaacagtt
tcccgacccatatttttcagattaaatctaatgccattttcagcttgcag
acatcttggataaattgataagaaagtactcatgggaacagtttctctgt
atcatgtgaaatcactgtgtaacatgctagatatcagatctgactttgac
atatcatccctgacactgagcttcaagtgtacagacacagaaagactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_91376661_91377774
seq2: B6Ng01-265D21.g_65_1162 (reverse)

seq1  GAGTCTTTTCTGTGTCCTGTACACCTGAGGCTCAGTGTCAGGGATGAATA  50
      ||||| ||||||||| |||||||| ||| ||||||||||||||||| |||
seq2  GAGTC-TTTCTGTGT-CTGTACACTTGAAGCTCAGTGTCAGGGATG-ATA  47

seq1  TGGTCAAAGGTCAGATTCCTGATATCTAGCATGTTAACCACAGTGATTTC  100
      | |||||| |||||||  ||||||||||||||||||  ||||||||||||
seq2  T-GTCAAA-GTCAGAT--CTGATATCTAGCATGTTA--CACAGTGATTTC  91

seq1  ACCATGGATACAGAGAAACTGTTCCCATGAAGTTACTTTCTTTATCAAAT  150
      | ||| ||||||||||||||||||||||||   ||||||| ||||| |||
seq2  A-CAT-GATACAGAGAAACTGTTCCCATGA--GTACTTTC-TTATC-AAT  135

seq1  TTATCCAAGATGTCTGCAAAGCCTGAAAATGGCATTAGATTTAATCTGAA  200
      |||||||||||||||||||   ||||||||||||||||||||||||||||
seq2  TTATCCAAGATGTCTGCAA--GCTGAAAATGGCATTAGATTTAATCTGAA  183

seq1  AAATATGGGTCGGGAAACTGTT-CCAAATTTTAGTCCACTATGCAGAATC  249
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AAATATGGGTCGGGAAACTGTTCCCAAATTTTAGTCCACTATGCAGAATC  233

seq1  TAGATCTTGTTAAAGGATTCAAATAAATTCTCTGAACCATGGTAAGTTCG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATCTTGTTAAAGGATTCAAATAAATTCTCTGAACCATGGTAAGTTCG  283

seq1  TGTTTCTATATGAAGAATTTTCTGTTGCAGCAGTACTTGCAAAATATGTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTATATGAAGAATTTTCTGTTGCAGCAGTACTTGCAAAATATGTA  333

seq1  CATTTAAAATTTACAGAAGATAATGAACACCACCCTCGGTATGTACCTCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAAAATTTACAGAAGATAATGAACACCACCCTCGGTATGTACCTCT  383

seq1  TAGTCTTCCCATTGACTAAGTAGATAGGTGGGTGACTTGGAAAATTTAGC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTTCCCATTGACTAAGTAGATAGGTGGGTGACTTGGAAAATTTAGC  433

seq1  ATTTCTTGAATCATAAAATGGGGAGGTTATGATTATGGTTGAAACAGAAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTGAATCATAAAATGGGGAGGTTATGATTATGGTTGAAACAGAAT  483

seq1  TGGAGTACTACCCCAAAACTAAGAATTCATTAGGGAAGATGTGGGCAGCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTACTACCCCAAAACTAAGAATTCATTAGGGAAGATGTGGGCAGCT  533

seq1  GAAACAAGTACTGTCTATGATAATCCTCAGTGGTTTCCTGGAGAATTAGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAAGTACTGTCTATGATAATCCTCAGTGGTTTCCTGGAGAATTAGT  583

seq1  GGAGACATGGGAATCAAAGAATCCACACTGCAATAGAAAAAATTGAACCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACATGGGAATCAAAGAATCCACACTGCAATAGAAAAAATTGAACCT  633

seq1  GAATGGAATGCATGCAGGAATATATTGCACATGTGAAGAAGGTACCCAAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGAATGCATGCAGGAATATATTGCACATGTGAAGAAGGTACCCAAC  683

seq1  CAACCTCCTTCTGATAATCCATATTACATGACGGTATATCTTTTAAAATA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTCCTTCTGATAATCCATATTACATGACGGTATATCTTTTAAAATA  733

seq1  TGGTCGGGAAATGGATAAATGAATTGTAATATTGATCATAATTTGCAGAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCGGGAAATGGATAAATGAATTGTAATATTGATCATAATTTGCAGAT  783

seq1  GTTCTCTAAGGGCCAGCACTAAAGTTCATTTCCAAGGTTATACCACTGTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCTAAGGGCCAGCACTAAAGTTCATTTCCAAGGTTATACCACTGTT  833

seq1  ACCTGAAATAAAATGCGTACCAGAAGCATCTTTAAGGAAGTATTGTAGTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAAATAAAATGCGTACCAGAAGCATCTTTAAGGAAGTATTGTAGTG  883

seq1  TGCTCCCTGCATCAGTTCTCTCATTCCCAGTGTCACAATGGTATTAGAGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCCTGCATCAGTTCTCTCATTCCCAGTGTCACAATGGTATTAGAGG  933

seq1  TTTTGGGGATTTCATGGGGTTTCTTTGGCCTTAAGTATACCTAGAAGAAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGGGATTTCATGGGGTTTCTTTGGCCTTAAGTATACCTAGAAGAAA  983

seq1  AATTTGTAATCAGTCAGAAATGAGACAATTATCTGCATTGAGATTCATGA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTAATCAGTCAGAAATGAGACAATTATCTGCATTGAGATTCATGA  1033

seq1  ATTTTAATGTGTCCTTTGCTTTGGAGGGCACTTTTTATAAGGAGAGAAAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAATGTGTCCTTTGCTTTGGAGGGCACTTTTTATAAGGAGAGAAAA  1083

seq1  AGATGAAAAGAATTC  1114
      |||||||||||||||
seq2  AGATGAAAAGAATTC  1098