BAC Information

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BAC

Clone NameB6Ng01-265H22
Chromosome3 (Build37)
Map Location 41,565,547 - 41,566,625
singlet/doubletsinglet
Overlap genenone
Upstream geneHspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2, EG666004, Ppia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e
Downstream geneLOC666031, LOC100039204
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265H22.bB6Ng01-265H22.g
ACCGA069129GA069130
length1,1911,082
definitionB6Ng01-265H22.b B6Ng01-265H22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattctaccagagaactcctaaacc
tgataaacagcttcgttgaagtagctggatataaaataaactcaaacaag
tcaatggcctttctctatacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatcttggcg
tgattctaactaaggaagtgaaagatctgtatgataaaaacttcaaatct
ctgaagaaagaaattaaggaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattggaaggagcaatttgcaaatttgtctggaataacaaaaaacc
taggatagcaaaaagtcttctcaaggataaaagaacttctggcggaatca
ccatgccagacctaaagctttactacagagcaattgtgataaaaactgca
tggtactggtatagagacagacaagtagaccaatggaatagaattgaaga
tccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag
ctaaaaccatccagtggaagaaagacagcattttcaacaattggtgctgg
cacaactggttgttatcgtgtagaagaatgcgaattgatccatacttatc
tccttgtactaaggtcaaatctaagtggatcaggacttcacttaaaacca
gagacactgaaacttatagagagaaagtggggtaaagcttgaggattggg
tcacagggtaaactctgaaccgaacagcattgcttggcgttagatcgaat
cggcaatggacttaatgaacctcaagatctctgtcaaggca
gaattcaatccccagaacacacactggtttttaaggctggggatggacta
gagagagagttcagtggctaagagtacttgctgctcttgcagaacaccca
agtttaattctcagggctcatgttgggcagttcaaaactaattttgactc
ctgcttctgaggatctgacaatctatctctgcaggcacttgtacacaaac
acacacgtatacaaagggacacacgcacacacataaataaactgggtgca
ttaaattaaataaatgccactctctaagcatctaaatatatgaacctgtg
ggaggggccattttgattcaaaccaacacagtcattaccaaagaaatgaa
acctaaaaccacccggtaccataaaacaaaagtaaaaggtggctgaagtt
ttgaaaatattgctgagtgataaaaccaaagtagatcactgtgtacaatt
ggttatcagtttaagtctgctgagacaaaacaccaagcatacatgtttga
cttgaaacaggtccattccttaggtaacaagtgacaacagaagtctagga
tttattgcagggcggtccttcaaggctcaggagtgctgcttgaagctaat
gtctccttttgtttgggcctttttcttatagtgctttctgccctggcatt
atattccagaagcgtatgactcactggagtgcaatgtttctggcctcttg
tttaggatggtcagaggcttaagaagggcctgagtggaactagctattct
ttcccatcaacatgttgcatttcataaacaacctaattattcttgaatag
tatatatgaagaaaggaaagaatattacgttttggtaagggccatcaaca
aatatattatcttgcacttgttgagtcacttcattatttgctatgtttct
cagagaaatcatgttttatagaatttttattcttaacatcacggagatgt
aaccaatcattttcccatccacaagagatgctgaagataaatgattgggg
cattgaatgtgtcagctttctactactgtgcccaaatgaacgtaggccta
aggaacaagaacgattaattttgtctcagttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41565547_41566625
seq2: B6Ng01-265H22.g_67_1148

seq1  GAATTCAATCCCCAGAACACACACTGGTTTTTAAGGCTGGGGATGGACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCCCCAGAACACACACTGGTTTTTAAGGCTGGGGATGGACTA  50

seq1  GAGAGAGAGTTCAGTGGCTAAGAGTACTTGCTGCTCTTGCAGAACACCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGTTCAGTGGCTAAGAGTACTTGCTGCTCTTGCAGAACACCCA  100

seq1  AGTTTAATTCTCAGGGCTCATGTTGGGCAGTTCAAAACTAATTTTGACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAATTCTCAGGGCTCATGTTGGGCAGTTCAAAACTAATTTTGACTC  150

seq1  CTGCTTCTGAGGATCTGACAATCTATCTCTGCAGGCACTTGTACACAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCTGAGGATCTGACAATCTATCTCTGCAGGCACTTGTACACAAAC  200

seq1  ACACACGTATACAAAGGGACACACGCACACACATAAATAAACTGGGTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACGTATACAAAGGGACACACGCACACACATAAATAAACTGGGTGCA  250

seq1  TTAAATTAAATAAATGCCACTCTCTAAGCATCTAAATATATGAACCTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTAAATAAATGCCACTCTCTAAGCATCTAAATATATGAACCTGTG  300

seq1  GGAGGGGCCATTTTGATTCAAACCAACACAGTCATTACCAAAGAAATGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGGCCATTTTGATTCAAACCAACACAGTCATTACCAAAGAAATGAA  350

seq1  ACCTAAAACCACCCGGTACCATAAAACAAAAGTAAAAGGTGGCTGAAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAAAACCACCCGGTACCATAAAACAAAAGTAAAAGGTGGCTGAAGTT  400

seq1  TTGAAAATATTGCTGAGTGATAAAACCAAAGTAGATCACTGTGTACAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAATATTGCTGAGTGATAAAACCAAAGTAGATCACTGTGTACAATT  450

seq1  GGTTATCAGTTTAAGTCTGCTGAGACAAAACACCAAGCATACATGTTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATCAGTTTAAGTCTGCTGAGACAAAACACCAAGCATACATGTTTGA  500

seq1  CTTGAAACAGGTCCATTCCTTAGGTAACAAGTGACAACAGAAGTCTAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAACAGGTCCATTCCTTAGGTAACAAGTGACAACAGAAGTCTAGGA  550

seq1  TTTATTGCAGGGCGGTCCTTCAAGGCTCAGGAGTGCTGCTTGAAGCTAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGCAGGGCGGTCCTTCAAGGCTCAGGAGTGCTGCTTGAAGCTAAT  600

seq1  GTCTCCTTTTGTTTGGGCCTTTTTCTTATAGTGCTTTCTGCCCTGGCATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCTTTTGTTTGGGCCTTTTTCTTATAGTGCTTTCTGCCCTGGCATT  650

seq1  ATATTCCAGAAGCGTATGACTCACTGGAGTGCAATGTTTCTGGCCTCTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCCAGAAGCGTATGACTCACTGGAGTGCAATGTTTCTGGCCTCTTG  700

seq1  TTTAGGATGGTCAGAGGCTTAAGAAGGGCCTGAGTGGAACTAGCTATTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGATGGTCAGAGGCTTAAGAAGGGCCTGAGTGGAACTAGCTATTCT  750

seq1  TTCCCATCAACATGTTGCATTTCATAAACAACCTAATTATTCTTGAATAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCATCAACATGTTGCATTTCATAAACAACCTAATTATTCTTGAATAG  800

seq1  TATATATGAAGAAAGGAAAGAATATTACG-TTTGGTAA-GGCCATCAACA  848
      ||||||||||||||||||||||||||||| |||||||| |||||||||||
seq2  TATATATGAAGAAAGGAAAGAATATTACGTTTTGGTAAGGGCCATCAACA  850

seq1  AATATATTATCTTGCAACTTGTTGAGTCACTTCATTATTTGCTATGTTTC  898
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AATATATTATCTTGC-ACTTGTTGAGTCACTTCATTATTTGCTATGTTTC  899

seq1  TCAGAGAAATCATG-TTTATAGAATTTTTATTCTTAACATCACGGAGATG  947
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TCAGAGAAATCATGTTTTATAGAATTTTTATTCTTAACATCACGGAGATG  949

seq1  TAAACAATCAATTTTCCATCCACAAGAGAATGCTGAAGATAAATGATTGG  997
      ||| |||||| ||| ||||||||||||| |||||||||||||||||||||
seq2  TAACCAATCATTTTCCCATCCACAAGAG-ATGCTGAAGATAAATGATTGG  998

seq1  GGCAATGAATGTGTCAGCTTTCTACTACTGTGCCAAAATGAAAGGTAGCC  1047
      |||| ||||||||||||||||||||||||||||| ||||||| |   |||
seq2  GGCATTGAATGTGTCAGCTTTCTACTACTGTGCCCAAATGAACGTAGGCC  1048

seq1  TAA-GAACAAG-AGGGTTTATTTTGTCTCAGTTT  1079
      ||| ||||||| | | || |||||||||||||||
seq2  TAAGGAACAAGAACGATTAATTTTGTCTCAGTTT  1082