BAC Information

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BAC

Clone NameB6Ng01-266B06
Chromosome3 (Build37)
Map Location 46,635,432 - 46,636,597
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC671801, EG241989
Downstream geneLOC545517, LOC383849, LOC383850, LOC100039426
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266B06.bB6Ng01-266B06.g
ACCGA069565GA069566
length1,2361,145
definitionB6Ng01-266B06.b B6Ng01-266B06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgtccctgcctgtattttaaaaattatgttatttgtatttga
ctctagatttagtcatttttatggactagatattaacccactgtaagata
catagctgagcaatgagtttctgccattctgtatttgcctttttcactta
acttgtttgtttcttatctgtgcagaaggttcttggtttcatgatgcctc
agttgtcaaatgttgctcttaattcatcgacatgaacctcttttcagaat
tttattttgtcctacaactatatgtcactatatgttttcttcttgcagtg
ttactatttcagctttaaatcgagacctaggttacaccttaaactattat
ctggaacaagatgataaatgcagatttgcttttatttttctgcctatgga
tatctaattttcacagctccagtttttgaacattgtttcttgtttctttt
cttaagtatatatatatatatatatatatatatatatttgcaattaaaag
caaattgaaaaaaattcatacaccaatatacaaagcatcaaactcaataa
aggatctaggaataaagtaaagacattctacaatgaaaacatccagtctc
tgaagaaagagactgaagagggccctagaaaatgatcgcacatcctgtat
tcactgattgggtgagctagtgctttggaaacagacatttcccaaaggaa
atttgcagattcaatgcaatcccaatcttgatactcttactacttttcac
agaaatagaaaatagtatattctaaagtttctacagaaccagaagagaga
cctgatattcaagccaattttaagcaaaaagactttggacaaattgctat
tcaagatgcaatatagaactaaaataaaaaaaagttagggcagaaacata
catatagaaccatgggataaaatagaagacttaaacatgaatgaatagtc
taactgcaactattggagatataggaagcacatatttattttcttcttca
attaactatcaaactctgaatttgcataattatagaatattttagtgaat
aaacctgtaagaatatatgatcatcattttgccatctaaaaactgctaac
acttcctcccctatttattgtttacctgcctgattaagtgatgaattcaa
catggcaatttactggataggttagtaataaagggcattccataaattct
ctcacttccagcgaatatttagagaaattttagact
gaattcctgaatacaattgtgatagatatgatgagatttaaatgtactac
attttgtttactttaaagtcacatgtgtaatgtaaattcaaaataaagca
aagcagttggtacatggatgcctatgtgacattgcaatcacagtgctatt
ggagtcttgggtatatgcttatagaaatattgttgataaaatctttgccc
tatgaatacaagcatgctcagagctaagaaactcaggctccaagagactg
taaaataggacgtttattgatccacacaccataaatagtttacgtttatg
gttataaacttaatgagtttaccttttaaggggttttgatttcttgttta
ttcattagcctcttctcatggccagagaaacactcaagcaatatattgaa
atggatgtttattttaggaagagtaaaatattttaaatgaaaactttttc
ttctatagacttattttttatcaaaattaatctcacaagaggagacattg
aattaatgcagacaaatgtgttcaggtgcaagttgatttgaaaatagctt
tagttacaccttacagtcatataaacacatgggcatttttagccacattg
attattaatgacttctggatgtttttctgaacccactgttggctaacata
aaattatcccagaaaaggatattgtagcaggcatctcttgatgtcagatg
gaaagaggaagaagagggaagatcactcagtcacctgccactttctttta
tacactggtgctcctttcgtctttaaggttgcaatttctgtgaagcaatc
acttccccaaaatgcctgcttctttctgggtagtaaggctgaatctacca
ctgcatggtcttagtgatctggcagaattactcggaaacctatttctgct
tagaacatttcaattgttgtttgattaatccactctttttatattaaatt
aagaattactctgatttatacacaaaagtgtgaaatccaaaatagtaatt
tattattttctgctgcttctaggcattgtctgttttcaagactgcagttg
agtcatttgtgatcagaagagtgcaggagagcaaatatcatgcacttcac
tgatgacccttcatgcctcccatcgcactgcataaataatggcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_46635432_46636597
seq2: B6Ng01-266B06.g_67_1211

seq1  GAATTCCTGAATACAATTGTGATAGATATGATGAGATTTAAATGTACTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGAATACAATTGTGATAGATATGATGAGATTTAAATGTACTAC  50

seq1  ATTTTGTTTACTTTAAAGTCACATGTGTAATGTAAATTCAAAATAAAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTTTACTTTAAAGTCACATGTGTAATGTAAATTCAAAATAAAGCA  100

seq1  AAGCAGTTGGTACATGGATGCCTATGTGACATTGCAATCACAGTGCTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGTTGGTACATGGATGCCTATGTGACATTGCAATCACAGTGCTATT  150

seq1  GGAGTCTTGGGTATATGCTTATAGAAATATTGTTGATAAAATCTTTGCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCTTGGGTATATGCTTATAGAAATATTGTTGATAAAATCTTTGCCC  200

seq1  TATGAATACAAGCATGCTCAGAGCTAAGAAACTCAGGCTCCAAGAGACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATACAAGCATGCTCAGAGCTAAGAAACTCAGGCTCCAAGAGACTG  250

seq1  TAAAATAGGACGTTTATTGATCCACACACCATAAATAGTTTACGTTTATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAGGACGTTTATTGATCCACACACCATAAATAGTTTACGTTTATG  300

seq1  GTTATAAACTTAATGAGTTTACCTTTTAAGGGGTTTTGATTTCTTGTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAAACTTAATGAGTTTACCTTTTAAGGGGTTTTGATTTCTTGTTTA  350

seq1  TTCATTAGCCTCTTCTCATGGCCAGAGAAACACTCAAGCAATATATTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTAGCCTCTTCTCATGGCCAGAGAAACACTCAAGCAATATATTGAA  400

seq1  ATGGATGTTTATTTTAGGAAGAGTAAAATATTTTAAATGAAAACTTTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATGTTTATTTTAGGAAGAGTAAAATATTTTAAATGAAAACTTTTTC  450

seq1  TTCTATAGACTTATTTTTTATCAAAATTAATCTCACAAGAGGAGACATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATAGACTTATTTTTTATCAAAATTAATCTCACAAGAGGAGACATTG  500

seq1  AATTAATGCAGACAAATGTGTTCAGGTGCAAGTTGATTTGAAAATAGCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATGCAGACAAATGTGTTCAGGTGCAAGTTGATTTGAAAATAGCTT  550

seq1  TAGTTACACCTTACAGTCATATAAACACATGGGCATTTTTAGCCACATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTACACCTTACAGTCATATAAACACATGGGCATTTTTAGCCACATTG  600

seq1  ATTATTAATGACTTCTGGATGTTTTTCTGAACCCACTGTTGGCTAACATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTAATGACTTCTGGATGTTTTTCTGAACCCACTGTTGGCTAACATA  650

seq1  AAATTATCCCAGAAAAGGATATTGTAGCAGGCATCTCTTGATGTCAGATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATCCCAGAAAAGGATATTGTAGCAGGCATCTCTTGATGTCAGATG  700

seq1  GAAAGAGGAAGAAGAGGGAAGATCACTCAGTCACCTGCCACTTTCTTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGGAAGAAGAGGGAAGATCACTCAGTCACCTGCCACTTTCTTTTA  750

seq1  TACACTGGTGCTCCTTTCGTCTTTAAGGTTGCAATTTCTGTGAAGCAATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTGGTGCTCCTTTCGTCTTTAAGGTTGCAATTTCTGTGAAGCAATC  800

seq1  ACTTCCCCAAAATGCCTGCTTCTTTCTGGGTAGTAAGGCTGAATCTACCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCCCAAAATGCCTGCTTCTTTCTGGGTAGTAAGGCTGAATCTACCA  850

seq1  CTGCATGGTCTTAGTGATCTGGCAGAATTACTCGGAAACCTATTTCTGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATGGTCTTAGTGATCTGGCAGAATTACTCGGAAACCTATTTCTGCT  900

seq1  TAGAACATTTCAAATTGTTGTTTGATTAATCCACTCTTTTTATATTAAAT  950
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TAGAACATTTC-AATTGTTGTTTGATTAATCCACTCTTTTTATATTAAAT  949

seq1  TAAGAATTACTCTGATTTATACCAACAAAAAGTGTGGAAATCCAAAATTA  1000
      ||||||||||||||||||||||  || |||||||| ||||||||||| ||
seq2  TAAGAATTACTCTGATTTATAC--AC-AAAAGTGT-GAAATCCAAAA-TA  994

seq1  GTAATTTATTATTTTCTGCTGGCTTCCTTAGGCATTGTCTGTTTTCAAAG  1050
      |||||||||||||||||||| |||||  |||||||||||||||||| |||
seq2  GTAATTTATTATTTTCTGCT-GCTTC--TAGGCATTGTCTGTTTTC-AAG  1040

seq1  ACTGCAGTTGAGTCAATTTGTGGATCAAGAAGAGTGCAAGAAGAGCAAAT  1100
      |||||||||||||| |||||| |||| |||||||||| || |||||||||
seq2  ACTGCAGTTGAGTC-ATTTGT-GATC-AGAAGAGTGC-AGGAGAGCAAAT  1086

seq1  AATCATGGAACCCTCACTGGATGACCCTTTCATG-CTTCCATCCGACTGC  1149
       |||||| |  | ||||| |||||||| |||||| || |||||  |||||
seq2  -ATCATGCA--CTTCACT-GATGACCC-TTCATGCCTCCCATCGCACTGC  1131

seq1  ATTAATATTAATGGCTA  1166
      || ||   |||||||||
seq2  ATAAA---TAATGGCTA  1145