BAC Information

Click to search

BAC

Clone NameB6Ng01-266F09
Chromosome3 (Build37)
Map Location 122,251,487 - 122,252,681
singlet/doubletsinglet
Overlap geneFnbp1l
Upstream geneA730020M07Rik, 4930432M17Rik, F3, Abcd3, LOC100043298, Arhgap29, Abca4, EG668788, LOC626807, LOC100043724, Gclm, Ppia-ps3_1245.1, Dnttip2, LOC675117, LOC100043726, Bcar3
Downstream genePpia-ps3_2252.1, Pde5a, LOC668792, Fabp2, 1810037I17Rik, Usp53, Myoz2, Synpo2, Sec24d, G430022H21Rik, Prss12, EG668804, Ndst3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266F09.bB6Ng01-266F09.g
ACCGA069757GA069758
length1,1921,082
definitionB6Ng01-266F09.b B6Ng01-266F09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaacagggactaacaaaatgctataatgaaaacaaaaaacaaaa
accaaccaaccaaaccctgacatttgatttttacttatctaatatgtaag
ccataatgttttctagtttaggtcattttacttttccctaaaacaaacaa
acaaaggtgtgtcacgggctggagagatgactcagaagttaaaatcactg
actgatctttcagaggacccaggttctattcccagcatccacatggaagc
tcacaaccatttctaactccagttccaggggtctgctggcctccacaggc
accaggcatgcaggtgatacatagatatacatgcagatcaaacactcata
cataatgaaataaaaataaaaaatttcaaatgtttcaaaaagtgtttcaa
tcgggatatatgatttgggggaatgataggattgaactcgggtcctcatg
aatgctaggccagcacttttcccactgacttatccccagcccagaaccaa
cgatctggaagcactctgtgtcagtgtacacagcactcattagttccaga
agggagagcaatgagggagggctcaaggaaacgctacttttggtctgctt
ccttctgcagccctcggttaagctcgtcaatgcgctgctgtaacttcttc
cgcctctgctctggtggcaaatgactgaaatcttctagtgctgggccctg
aaaagagagcctaaatcattattgagacactttcagatatgttgtttctt
aactttaccttttttataaatgaagcaactaacttcaatttttatttagc
ttcaacttaaaaaaaaatctatacagatgtattagtaaaattcaaagctt
aaatttcatatttataaaaacatgaaaataggcaggaaaaaaaaaagaaa
tcttaccaaatacaggtaattatgaactatattacattatttcaagtctt
gacagttaaaatgaatacacacaaggtcttcttacagcaacaacaagtgg
gaacacacaccatttctcatttatattattgaactacttctgtatgtact
cttacatagaattcttaagaaaaaatcagttcatgacattaagatgcatg
gatattgcctaaataaaatacgagattcatagctggagcaacataaggca
cttaacggcatgagacaactaataaattatttccaatactgc
gaattcactctccgtataagctccccgggcgccatggtatggcccaaatg
attgtttcgacatcgtggctaaaagtcacttgtgaagctgaaaaggtccc
aggaatgtttcaaaactgaaattttagcagtacaaatgattttctctcta
aagtgattacttcacaggtcatacataatcagcagtttgtgttgctaagg
acattttagcccccgttaataacagctgatttaagtacccaactgtgtcc
aataagcaggtcatatgtacaaagaaaaatgagtagagaaacatcagagt
taaatgacatcatgcatgcatcaaatggacttagcagctacagaacattc
cacccaaacacaaaaggatgcacattatactccgaggcacacagaagcct
ctaaaacacaacacatactcggacacagcacaaaccttcacacattcaaa
gaggttgaaatacctccatgtatcccatctgaccacagtgtaatgaggct
taaaactgaccacaaaccaatctctagtaaaaacacagactcgtggagat
taaacaacttattacgaaatgacgagtaggtcagtgaagaaacggagaaa
gaaaataagaaatttcccagaactaaatgaaaacaaaaccacagcccagc
aaaacctctgaccacatcaaaagcagtcccacgagagaaatttacagtta
tgagtccctacattaagaagctacacccacgaagtctcaccaacataagc
tgaacaaggttgaccccattaacacgccaaacaaacagagcagagaccac
aggcctcgaccctgcatgaagaactataggcaagtggggaaatctgggtg
ctagagagatgacactccccaggggagagaagagcatacaaatcgattgt
ctagcgccaaatggttagccctgaaatgatatatacaggtagcattatat
ggagtgaatagcttatatttaggacatatatatatatatatatacagcat
tagttttgtaaaatgagcctatgcatatgaagaagagcaggaggagtatt
atggggagggattttgggaggggagagaacgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_122251487_122252681
seq2: B6Ng01-266F09.b_47_1238

seq1  GAATTCTAACAGGGACTAACAAAATGCTATAATGAAAACAAAAAACAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAACAGGGACTAACAAAATGCTATAATGAAAACAAAAAACAAAA  50

seq1  ACCAACCAACCAAACCCTGACATTTGATTTTTACTTATCTAATATGTAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACCAACCAAACCCTGACATTTGATTTTTACTTATCTAATATGTAAG  100

seq1  CCATAATGTTTTCTAGTTTAGGTCATTTTACTTTTCCCTAAAACAAACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAATGTTTTCTAGTTTAGGTCATTTTACTTTTCCCTAAAACAAACAA  150

seq1  ACAAAGGTGTGTCACGGGCTGGAGAGATGACTCAGAAGTTAAAATCACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGGTGTGTCACGGGCTGGAGAGATGACTCAGAAGTTAAAATCACTG  200

seq1  ACTGATCTTTCAGAGGACCCAGGTTCTATTCCCAGCATCCACATGGAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATCTTTCAGAGGACCCAGGTTCTATTCCCAGCATCCACATGGAAGC  250

seq1  TCACAACCATTTCTAACTCCAGTTCCAGGGGTCTGCTGGCCTCCACAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAACCATTTCTAACTCCAGTTCCAGGGGTCTGCTGGCCTCCACAGGC  300

seq1  ACCAGGCATGCAGGTGATACATAGATATACATGCAGATCAAACACTCATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGCATGCAGGTGATACATAGATATACATGCAGATCAAACACTCATA  350

seq1  CATAATGAAATAAAAATAAAAAATTTCAAATGTTTCAAAAAGTGTTTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATGAAATAAAAATAAAAAATTTCAAATGTTTCAAAAAGTGTTTCAA  400

seq1  TCGGGATATATGATTTGGGGGAATGATAGGATTGAACTCGGGTCCTCATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGATATATGATTTGGGGGAATGATAGGATTGAACTCGGGTCCTCATG  450

seq1  AATGCTAGGCCAGCACTTTTCCCACTGACTTATCCCCAGCCCAGAACCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTAGGCCAGCACTTTTCCCACTGACTTATCCCCAGCCCAGAACCAA  500

seq1  CGATCTGGAAGCACTCTGTGTCAGTGTACACAGCACTCATTAGTTCCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATCTGGAAGCACTCTGTGTCAGTGTACACAGCACTCATTAGTTCCAGA  550

seq1  AGGGAGAGCAATGAGGGAGGGCTCAAGGAAACGCTACTTTTGGTCTGCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGAGCAATGAGGGAGGGCTCAAGGAAACGCTACTTTTGGTCTGCTT  600

seq1  CCTTCTGCAGCCCTCGGTTAAGCTCGTCAATGCGCTGCTGTAACTTCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTGCAGCCCTCGGTTAAGCTCGTCAATGCGCTGCTGTAACTTCTTC  650

seq1  CGCCTCTGCTCTGGTGGCAAATGACTGAAATCTTCTAGTGCTGGGCCCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTCTGCTCTGGTGGCAAATGACTGAAATCTTCTAGTGCTGGGCCCTG  700

seq1  AAAAGAGAGCCTAAATCATTATTGAGACACTTTCAGATATGTTGTTTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGAGCCTAAATCATTATTGAGACACTTTCAGATATGTTGTTTCTT  750

seq1  AACTTTACCTTTTTTATAAATGAAGCAACTAACTTCAATTTTTATTTAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTACCTTTTTTATAAATGAAGCAACTAACTTCAATTTTTATTTAGC  800

seq1  TTCAACTTAAAAAAAAATCTATACAGATGTATTAGTAAAATTCAAAGCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACTTAAAAAAAAATCTATACAGATGTATTAGTAAAATTCAAAGCTT  850

seq1  AAATTTCATATTTATAAAAACATGAAAATAGGCAGGAAAAAAAAAAGAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCATATTTATAAAAACATGAAAATAGGCAGGAAAAAAAAAAGAAA  900

seq1  TCTTACCAAATACAGGTAATTATGAACTATATTACATTATTTCAAGTCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACCAAATACAGGTAATTATGAACTATATTACATTATTTCAAGTCTT  950

seq1  GACAGTTAAAATGAATACACACAA-GTCTTCTTACAGCAACAACAAAATG  999
      |||||||||||||||||||||||| ||||||||||||||||||| || ||
seq2  GACAGTTAAAATGAATACACACAAGGTCTTCTTACAGCAACAAC-AAGTG  999

seq1  GGAACACACAACATTTCTCATTTATATTATTGAACTAC-TCTGTATGTAC  1048
      |||||||||| ||||||||||||||||||||||||||| |||||||||||
seq2  GGAACACACACCATTTCTCATTTATATTATTGAACTACTTCTGTATGTAC  1049

seq1  TCTTACATAGAATTCTTAAGGAAAAAAATCCAGTCATGACATTTAGAATG  1098
      ||||||||||||||||||||  ||||||||   |||||||||| || |||
seq2  TCTTACATAGAATTCTTAAG--AAAAAATCAGTTCATGACATTAAG-ATG  1096

seq1  CCATGAATAT--GCTAAATAAAAATACGAGATTCATAGCT-GAGCAACAT  1145
       |||| ||||   |||||| |||||||||||||||||||| |||||||||
seq2  -CATGGATATTGCCTAAAT-AAAATACGAGATTCATAGCTGGAGCAACAT  1144

seq1  AAGCAACTT-ACCGCATGAAGACAACTAATTAATATATATTTCAATACTG  1194
      |||  |||| || ||||| ||||||||||| ||| ||| || ||||||||
seq2  AAGGCACTTAACGGCATG-AGACAACTAATAAAT-TAT-TTCCAATACTG  1191

seq1  C  1195
      |
seq2  C  1192