BAC Information

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BAC

Clone NameB6Ng01-266K02
Chromosome3 (Build37)
Map Location 5,768,319 - 5,769,536
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC620283, Zfhx4, Pxmp3, EG620382, EG667759
Downstream geneLOC100041165, LOC100041193, EG620570, LOC100041214, LOC383818, 1700008P02Rik, LOC100039349, Olfr289-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266K02.bB6Ng01-266K02.g
ACCGA069979GA069980
length1,2021,169
definitionB6Ng01-266K02.b B6Ng01-266K02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
tttaacatacttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaattgctaagatcaaaaattcaggttgtgta
catctttaatcccagcacatgggaggcagaggcaggtggatttctaagtt
tgaggccagcctggtctacaaagtgagttccagaacagccagggctacac
agagaaaccctgtctcaaaaaaaaaaaaaaaaaaaaaaaaaaaaagtgtg
caggctccacacaggacaaattggttgtatagaaactgtatggaataatt
ttctggaatcactggggcaaagatttgttaaggcctaaaaagtgtcacca
gtgaatcctgattttacttgagttgtgttttgtactttcattctataata
taaatattcatctgacctaagttttagaaacagtggaaatagtgcttatt
ttatattcctggtagtttccacactaaacattaatcttgatgatagagcc
ttctaaagattctgttttgtctctggggtgaaagaatcatatttccaaaa
catacatgagcactgcattgaggatcagatatactgcagcttttgccatt
tcagaggaatagatttgtgagcacaataataattctggacaataattctg
actacacatttaaacaaacaaaaactaatataatgattctgctctggctt
aattaaatcagaatcatatgaaataaaaacagaggaaaccttgaattaaa
tagtctgagtaaactttcattcaaatttcctagggaaattgtaaagctac
cacagccttctacctcattcaacacaacaaggaccctggctatcagaact
ctttggggagcttgttaaaataaatgcacatttaagattgaaaagaaata
tgaactacagggtttctagttatattttaaataggtaagtctgaaatata
cctctaaatctgttttttaaaatatgcatattgtattgtgcttactagtg
ctactgtttcctcttatctgaaactagtgtaaatcacatatgagtggcta
tgactgtatgtcaacttactgttgtgaatcactgttatcagcactatcat
gcactgattacctactatgtgtaattggacaaaacgggaaaaattggtgt
ga
gaattctttgtttaccgatgtatcccatttttaatgagtttatttgatat
tgtggagtagagcttcttgaggtctttgtatatattggatattagtcccc
tatcaaatttaggattggtaaagatactttcccattctgttggtggcctt
tttgttttattgaccatgtcttttacctttcaaatttggctttgcaaatt
tatgaggtctcatttgttgattctccatcttacagcacaagccattgcta
ttctgttcaggaatttttcctctgtgcccatatctttgaggctttttcct
actttctcctctataagttttagtgtctctggttttatgtggagttcctt
gatccacttagactttagctgtgtacacaaagataagaatggatcaattc
acattcttctacatgataactgccagttgagccagcaccaattgttgaaa
atgttatcttttttccactggatggttttagctcctttgtcaaagatcac
gtgaccaaaggtgtgtgagttgatttctgggtcttcaattctattccatt
gatctacctgtctgtcgctataacagtaccatgcagttcttatcacaatt
gctctggagtatagcttgaggacaggcatggtaattccatctgaacttct
tttattgttgagaataatttttgctatcctagattttttgttattccaga
tgaatttgtgaattactctttctaactcagtgaagaattgagctgggatt
ttgatggggattcattgaatctgtagattgttttcagcaaaatagccttt
ttttactatattaatcctgtcaatacatgagcatgggagatctttccatc
ttctgagatcttcttcgattttttttcttcagacttgaagttcttatcat
acatatcttttacttccttagagtcacaccaaggtatcttttattatttg
tgattattgtgaaggtgatgtttccctaatttctttctcagcccatttat
ccttgtgtagagaagaccactgatttgttgacttaatttctatcagctac
tgcactgaagctgtttatcagttagaggttctctggtggaatttttagtc
actatttatcatctgcgatcggaattgacttcccattcaatgttcctgaa
ctatgtgtgctcaatggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_5768319_5769536
seq2: B6Ng01-266K02.b_43_1244

seq1  GAATTCTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTGAAAAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTGAAAAAATG  50

seq1  TTTAACATACTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACATACTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGAT  100

seq1  TCCACCTCACACCAGTCAGAATTGCTAAGATCAAAAATTCAGGTTGTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTCACACCAGTCAGAATTGCTAAGATCAAAAATTCAGGTTGTGTA  150

seq1  CATCTTTAATCCCAGCACATGGGAGGCAGAGGCAGGTGGATTTCTAAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTAATCCCAGCACATGGGAGGCAGAGGCAGGTGGATTTCTAAGTT  200

seq1  TGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGAACAGCCAGGGCTACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGAACAGCCAGGGCTACAC  250

seq1  AGAGAAACCCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAACCCTGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTGTG  300

seq1  CAGGCTCCACACAGGACAAATTGGTTGTATAGAAACTGTATGGAATAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTCCACACAGGACAAATTGGTTGTATAGAAACTGTATGGAATAATT  350

seq1  TTCTGGAATCACTGGGGCAAAGATTTGTTAAGGCCTAAAAAGTGTCACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGAATCACTGGGGCAAAGATTTGTTAAGGCCTAAAAAGTGTCACCA  400

seq1  GTGAATCCTGATTTTACTTGAGTTGTGTTTTGTACTTTCATTCTATAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATCCTGATTTTACTTGAGTTGTGTTTTGTACTTTCATTCTATAATA  450

seq1  TAAATATTCATCTGACCTAAGTTTTAGAAACAGTGGAAATAGTGCTTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATTCATCTGACCTAAGTTTTAGAAACAGTGGAAATAGTGCTTATT  500

seq1  TTATATTCCTGGTAGTTTCCACACTAAACATTAATCTTGATGATAGAGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTCCTGGTAGTTTCCACACTAAACATTAATCTTGATGATAGAGCC  550

seq1  TTCTAAAGATTCTGTTTTGTCTCTGGGGTGAAAGAATCATATTTCCAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAAGATTCTGTTTTGTCTCTGGGGTGAAAGAATCATATTTCCAAAA  600

seq1  CATACATGAGCACTGCATTGAGGATCAGATATACTGCAGCTTTTGCCATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATGAGCACTGCATTGAGGATCAGATATACTGCAGCTTTTGCCATT  650

seq1  TCAGAGGAATAGATTTGTGAGCACAATAATAATTCTGGACAATAATTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGGAATAGATTTGTGAGCACAATAATAATTCTGGACAATAATTCTG  700

seq1  ACTACACATTTAAACAAACAAAAACTAATATAATGATTCTGCTCTGGCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACACATTTAAACAAACAAAAACTAATATAATGATTCTGCTCTGGCTT  750

seq1  AATTAAATCAGAATCATATGAAATAAAAACAGAGGAAACCTTGAATTAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAATCAGAATCATATGAAATAAAAACAGAGGAAACCTTGAATTAAA  800

seq1  TAGTCTGAGTAAACTTTCATTCAAATTTCCTAGGGAAATTGTAAAGCTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTGAGTAAACTTTCATTCAAATTTCCTAGGGAAATTGTAAAGCTAC  850

seq1  CACAGCCTTCTACCTCATTCAACACAACAAGGACCCTGGCTATCAGAACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCCTTCTACCTCATTCAACACAACAAGGACCCTGGCTATCAGAACT  900

seq1  CTTT-GGGAGCTTGTTAAAAATAAATGCACATTTAAGATTGAAAAGAAAT  949
      |||| ||||||||||| |||||||||||||||||||||||||||||||||
seq2  CTTTGGGGAGCTTGTT-AAAATAAATGCACATTTAAGATTGAAAAGAAAT  949

seq1  AATGAACTACAGGGTTTCTAGTTATATTTTAAATAGGTAAGTCTGAAATA  999
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -ATGAACTACAGGGTTTCTAGTTATATTTTAAATAGGTAAGTCTGAAATA  998

seq1  TACCTCTAAATCTGTTTTTTAAAATATGCATATTGTA-TGTGCTTAACTA  1048
      ||||||||||||||||||||||||||||||||||||| ||||||| ||||
seq2  TACCTCTAAATCTGTTTTTTAAAATATGCATATTGTATTGTGCTT-ACTA  1047

seq1  GTGCTTAACCTGTTT-CTCTTATCTGGAAACTAGTGGTAAAATTAAACAT  1097
      |||||    |||||| ||||||||| ||||||||| |||||     ||||
seq2  GTGCT---ACTGTTTCCTCTTATCT-GAAACTAGT-GTAAA---TCACAT  1089

seq1  ATGAAGTGCTAAATGAGCTGTATGTCAACCTAAGTGTTGTGATTCACTTG  1147
      ||||   |||  |||| ||||||||||| || | |||||||| |||||  
seq2  ATGAGTGGCT--ATGA-CTGTATGTCAA-CTTACTGTTGTGAATCACT--  1133

seq1  TTTATCAAGCCAACTATCATTCACTGAGTACCTACTATGTGTAATTTGAC  1197
       ||||| |||  |||||||| |||||| |||||||||||||||||| |||
seq2  GTTATC-AGC--ACTATCATGCACTGATTACCTACTATGTGTAATTGGAC  1180

seq1  AAAACAGG-AAAATTGGTGAGA  1218
      ||||| || |||||||||| ||
seq2  AAAACGGGAAAAATTGGTGTGA  1202