BAC Information

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BAC

Clone NameB6Ng01-266L08
Chromosome3 (Build37)
Map Location 144,293,739 - 144,294,748
singlet/doubletsinglet
Overlap genenone
Upstream geneEG621809, LOC100039938, LOC100039952, Lmo4, LOC545572, Hs2st1, Sep15, LOC435761
Downstream geneSh3glb1, LOC668890, Clca1, Clca2, Clca4, EG622139, AI747448, Clca6, Clca3, Clca5, Odf2l, Col24a1, 2410019A14Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266L08.bB6Ng01-266L08.g
ACCGA070037GA070038
length1,2021,007
definitionB6Ng01-266L08.b B6Ng01-266L08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccattttgtaatggggttatttgatt
ttctggagcccaccttcttgagttctttatatatattggatattagtccc
ctatctgatttaggataggtaaagatcctttccgaatctgttggtggtct
ttttgtcttgttgacagtgtcttttgtcttgcagaagctttgcaacttta
tgaggtcccatttatcgattcacaatcttactgcacaatccattgctgtt
ctattcaggaacttttcccctgtacccagatcttcgaggctttctcctct
ataagtttcagtgtctctggttttatgtggagttccttaatccacttaga
tttgaccttagtacaaggatataggaatggaacaattcgcattcttctac
atggtaaccaccagttgtgccagcaccatttgttgaaaatgctgtctttt
ttccactggatgattttagctcccttgccaaagatcaagtgaccataggt
gtgtgagttcatctctgggtcttaaattctgttccattagtctacttgtc
tgtcactataccaataccatgcagttttgatcacaattgctctgtagtac
agctttaggtccggcatggtgattccaccagaggttcttttatccttgag
aagagtttttgctgtcctaggttttttgttattccagatgaatctgctga
ttgccctttctaattcgttgaagaattgagttggaattttgataggattg
cattgaatctgtagattgcttttggcaagatagccatttttacaatgttg
atcctgccaatccatgagcatgggagatctttccatcttctgagatcttc
tttaattttctttcttcagagacttgaagttcttatcatacagatctttc
acttccttagttagagtcacgccaaggtattttatattatttgtgactat
tgagaaagggtgttggtttccctaatttctcttctcagcctgtttatcat
ttgtgtacagaaaaggccattgacttgcttgagttaattttataatccag
ctacttcaatgaagctgtttattcaggctagagttctctggtgcagttaa
ggtccactatataatacctatgaattcactgcaaaagtgatttcgaactc
tctccgtggatccatggatccgtttgttgtgcctactggcctctggcgct
at
gaattcttttattagttctccaataaatgtcagaaacaagcactctattt
cttctgagcttccttgtgtgtgtgtgtgtgttttttttttttttttacaa
attaaatattttgctctttttcattaaaaagagttgtggacagtcttaaa
agagaaaaagtatttcaggaataaaaatgacctttaaccccactgcccac
gtgtaagtgtcagttgcgttctgatgtacgatgtagttgttactagattc
agagattgtgatacggacagatctagtctacagtgcccaagggaacataa
acacagtcacccaaacaccctctagaactccacgagaccttcagggccct
ctatgatataaggttcttaaggaagttttaagcattcgaaaccatgatgc
aaaaggcactaaaaactagaccatattttaatagcatccgtcataggata
tagatagatcataatttgcagaacattcccctaaaactgctcagggcctg
atttcagagatggccaggagggaaaaggaaaagctgacaatggagtgaat
ctcaaacactcccccgtgaaccgccccaggcttgaacttgaacttgggac
aggtggatgccagcctgccagctctctgattggccttcacatcatcttcc
atcctgtaccacctccatttctgtttcctcaaacacttgactaaattcat
cttcgtgatgaataagcattcgatcaaaagaaacaatgactcctaatgaa
cgcctgtggcaccttgctcctcccccctgagttcaggactgtggttgaac
cctcgatggtttcctgttgaaagaccccggcgggaatcccacctcaggaa
ggcgcgcacacccagtaggacgctgagaccgatctcgctgtaagtacacg
aggcttaatggcacacaaacacacaaacaacaaaggagcgctcagccagc
atgctgggggtgaaactcatgcaccgcacaggggcagaggagttcgaccc
tgcccaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_144293739_144294748
seq2: B6Ng01-266L08.g_65_1071

seq1  GAATTCTTTTATTAGTTCTCCAATAAATGTCAGAAACAAGCACTCTATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTATTAGTTCTCCAATAAATGTCAGAAACAAGCACTCTATTT  50

seq1  CTTCTGAGCTTCCTTGTGTGTGTGTGTGTGTTTTTTTTTTTTTTTTACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGAGCTTCCTTGTGTGTGTGTGTGTGTTTTTTTTTTTTTTTTACAA  100

seq1  ATTAAATATTTTGCTCTTTTTCATTAAAAAGAGTTGTGGACAGTCTTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATATTTTGCTCTTTTTCATTAAAAAGAGTTGTGGACAGTCTTAAA  150

seq1  AGAGAAAAAGTATTTCAGGAATAAAAATGACCTTTAACCCCACTGCCCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAAAGTATTTCAGGAATAAAAATGACCTTTAACCCCACTGCCCAC  200

seq1  GTGTAAGTGTCAGTTGCGTTCTGATGTACGATGTAGTTGTTACTAGATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAAGTGTCAGTTGCGTTCTGATGTACGATGTAGTTGTTACTAGATTC  250

seq1  AGAGATTGTGATACGGACAGATCTAGTCTACAGTGCCCAAGGGAACATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATTGTGATACGGACAGATCTAGTCTACAGTGCCCAAGGGAACATAA  300

seq1  ACACAGTCACCCAAACACCCTCTAGAACTCCACGAGACCTTCAGGGCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGTCACCCAAACACCCTCTAGAACTCCACGAGACCTTCAGGGCCCT  350

seq1  CTATGATATAAGGTTCTTAAGGAAGTTTTAAGCATTCGAAACCATGATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGATATAAGGTTCTTAAGGAAGTTTTAAGCATTCGAAACCATGATGC  400

seq1  AAAAGGCACTAAAAACTAGACCATATTTTAATAGCATCCGTCATAGGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGCACTAAAAACTAGACCATATTTTAATAGCATCCGTCATAGGATA  450

seq1  TAGATAGATCATAATTTGCAGAACATTCCCCTAAAACTGCTCAGGGCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAGATCATAATTTGCAGAACATTCCCCTAAAACTGCTCAGGGCCTG  500

seq1  ATTTCAGAGATGGCCAGGAGGGAAAAGGAAAAGCTGACAATGGAGTGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGAGATGGCCAGGAGGGAAAAGGAAAAGCTGACAATGGAGTGAAT  550

seq1  CTCAAACACTCCCCCGTGAACCGCCCCAGGCTTGAACTTGAACTTGGGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAACACTCCCCCGTGAACCGCCCCAGGCTTGAACTTGAACTTGGGAC  600

seq1  AGGTGGATGCCAGCCTGCCAGCTCTCTGATTGGCCTTCACATCATCTTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGATGCCAGCCTGCCAGCTCTCTGATTGGCCTTCACATCATCTTCC  650

seq1  ATCCTGTACCACCTCCATTTCTGTTTCCTCAAACACTTGACTAAATTCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGTACCACCTCCATTTCTGTTTCCTCAAACACTTGACTAAATTCAT  700

seq1  CTTCGTGATGAATAAGCATTCGATCAAAAGAAACAATGACTCCTAATGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCGTGATGAATAAGCATTCGATCAAAAGAAACAATGACTCCTAATGAA  750

seq1  CGCCTGTGGCACCTTGCTCCTCCCCCCTGAGTTCAGGACTGTGGTTGAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTGTGGCACCTTGCTCCTCCCCCCTGAGTTCAGGACTGTGGTTGAAC  800

seq1  CCTCGATGGTTTCCTGTTGAAAGACCCCGGCGGGAATCCCACCTCAGGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGATGGTTTCCTGTTGAAAGACCCCGGCGGGAATCCCACCTCAGGAA  850

seq1  GGCGCGCACACCCAGTAGGACGCTGAGACCGATCTCGCTGTAAGTACACG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGCGCACACCCAGTAGGACGCTGAGACCGATCTCGCTGTAAGTACACG  900

seq1  AGGCTTTAATGGCACACAAACACACAAACAACAAAGGAGCGCTCAAGCCA  950
      |||| ||||||||||||||||||||||||||||||||||||||| |||||
seq2  AGGC-TTAATGGCACACAAACACACAAACAACAAAGGAGCGCTC-AGCCA  948

seq1  GCATGCT-GGGGTGAAACTCATGCACCGCACAGGGGGCAGAGGAGTTCGA  999
      ||||||| |||||||||||||||||||||||| |||||||||||||||||
seq2  GCATGCTGGGGGTGAAACTCATGCACCGCACA-GGGGCAGAGGAGTTCGA  997

seq1  CCCCTGCCCAA  1010
       ||||||||||
seq2  -CCCTGCCCAA  1007