BAC Information

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BAC

Clone NameB6Ng01-267B05
Chromosome3 (Build37)
Map Location 45,637,421 - 45,638,325
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC676484, LOC100039296, Pcdh10, LOC100039282, LOC433580
Downstream geneLOC671801, EG241989
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267B05.bB6Ng01-267B05.g
ACCGA070302GA070303
length1,1981,016
definitionB6Ng01-267B05.b B6Ng01-267B05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctatcctctttaggactgcaatccttcttgttcttccataagag
tccccaagcttcatccactgtttgactgtgggtgattgcatctgtgtgag
ccagctgctggtggagcctctcagaggacaacatgctccttcctacaaac
ataacagagtatcattagtagtgttagtgattggtgcatgcccatgggat
gggtcttaatttggccccgttattatttggccattccctcagtctcttcc
ccattctcagtgcccctacattacttgtagataaaataaatattgaattg
aaagttttatgggtgtgttagtgtctctgtcactacaaatgtgttcctat
gtggatatgggaggtggcttattcaggtttcatatccccagtgtagtgag
tcacagctgaggtcatacccattgattcttgggcagcacccttatcccag
gttctgtcttgtcctggagatgagtccccaccaccatcaccaccacatac
acacatccttaacccatcagttgcagatttccattaattttcatgaccat
ttagccatctctcctgtctttcctcacacctgatcctaaataccccattc
cccttcctatcccttcctcccagccacccccctccacctccctcttctgt
ctattttagctccccttgtatgtgaaattcaagcttccttctttggtcct
tccctcctgtacttccacccttctttgggtgtgtagagtgtaacatggta
catgcattttatgactaatattcacttataagtgagtacataccattcat
gtcctttaggactgggttacttcactcaagatgtcattctaatgttacat
ccatttgcctgaaaaattcatgatggctttgtttttaatagctgaatagt
attctatttgtatgtgctacattttctttatacattcttgatttgaagga
catctagtttgtttacagtgtctggctattatgaataaagctactatgga
catagtcaaacaagtgtcatgtagatgatgggattttggggatattgcct
aggtggtggatagctaagtcttaaagtacaccatcccagctttctggaaa
aattaattatcagattggctggtacaagtctacacttcaccagcatgagg
ctgttcactgtccctacattcctgacacgagtacagtttcatatgcct

gaattcagcatttctcattctagttctaaaactgtatatccaattgttct
ttaaacacctctgttcggcccccaagagtgctcaaaacccatattttata
acctcagagctaataaggaattcacctataaaaaggtagaaagtgttttc
tcttaaaacaaggaaaaaacaactatgccatctttatttctgttcaacat
atagaatgcaataatggaatgatgataatgtttaaagatattttgcaaat
tttgagacaatattttagataaggtcaactttgtgtctcacgtattttaa
aaagacagttcctaaaatgctctatttgtagacttagagaaaggcacaca
tgtttccaacctagacaaagaattataggaaacacatgtcttaccaagag
ggaatatctgaagaaaggccaatggaagattgtagtgaggacagactgaa
aagcagtgggaatcctagcatatttgatacacagtgatcagaatgtgact
acaaggaatgacagaagctgtggatagaacttcctacacttggaagatga
actgatgctctggagggcaaagcatgagaagtacagttgcctggcattct
ggagaccaggagatccagagttgcaaatgttacatattaagccattacac
tgttggattttgggtttatgatgattataactatggcatttctctacctt
ttaaagaagaaactatatttttttgtatgagtttaccattgagacacttt
ggatatataaaggaaaaattggattttttaaacatagactataaaagcac
tgatcacaaagtctgtggaaataagtattataatgtctatattgtgatat
taagatagtatgaaaattgggggatgaaaaaaaagagtattcgcatggat
ttacgaaaagatatcggtgtgtcaaattggcacaggataagttttgctgt
tttgtttgtttgtcaaaatgacccaaacttatatgtgtcttggtctggca
gaaatttcaactagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_45637421_45638325
seq2: B6Ng01-267B05.g_70_975

seq1  GAATTCAGCATTTCTCATTCTAGTTCTAAAACTGTATATCCAATTGTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCATTTCTCATTCTAGTTCTAAAACTGTATATCCAATTGTTCT  50

seq1  TTAAACACCTCTGTTCGGCCCCCAAGAGTGCTCAAAACCCATATTTTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACACCTCTGTTCGGCCCCCAAGAGTGCTCAAAACCCATATTTTATA  100

seq1  ACCTCAGAGCTAATAAGGAATTCACCTATAAAAAGGTAGAAAGTGTTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAGAGCTAATAAGGAATTCACCTATAAAAAGGTAGAAAGTGTTTTC  150

seq1  TCTTAAAACAAGGAAAAAACAACTATGCCATCTTTATTTCTGTTCAACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAAACAAGGAAAAAACAACTATGCCATCTTTATTTCTGTTCAACAT  200

seq1  ATAGAATGCAATAATGGAATGATGATAATGTTTAAAGATATTTTGCAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAATGCAATAATGGAATGATGATAATGTTTAAAGATATTTTGCAAAT  250

seq1  TTTGAGACAATATTTTAGATAAGGTCAACTTTGTGTCTCACGTATTTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGACAATATTTTAGATAAGGTCAACTTTGTGTCTCACGTATTTTAA  300

seq1  AAAGACAGTTCCTAAAATGCTCTATTTGTAGACTTAGAGAAAGGCACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACAGTTCCTAAAATGCTCTATTTGTAGACTTAGAGAAAGGCACACA  350

seq1  TGTTTCCAACCTAGACAAAGAATTATAGGAAACACATGTCTTACCAAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCAACCTAGACAAAGAATTATAGGAAACACATGTCTTACCAAGAG  400

seq1  GGAATATCTGAAGAAAGGCCAATGGAAGATTGTAGTGAGGACAGACTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATATCTGAAGAAAGGCCAATGGAAGATTGTAGTGAGGACAGACTGAA  450

seq1  AAGCAGTGGGAATCCTAGCATATTTGATACACAGTGATCAGAATGTGACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGTGGGAATCCTAGCATATTTGATACACAGTGATCAGAATGTGACT  500

seq1  ACAAGGAATGACAGAAGCTGTGGATAGAACTTCCTACACTTGGAAGATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGAATGACAGAAGCTGTGGATAGAACTTCCTACACTTGGAAGATGA  550

seq1  ACTGATGCTCTGGAGGGCAAAGCATGAGAAGTACAGTTGCCTGGCATTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATGCTCTGGAGGGCAAAGCATGAGAAGTACAGTTGCCTGGCATTCT  600

seq1  GGAGACCAGGAGATCCAGAGTTGCAAATGTTACATATTAAGCCATTACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACCAGGAGATCCAGAGTTGCAAATGTTACATATTAAGCCATTACAC  650

seq1  TGTTGGATTTTGGGTTTATGATGATTATAACTATGGCATTTCTCTACCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGATTTTGGGTTTATGATGATTATAACTATGGCATTTCTCTACCTT  700

seq1  TTAAAGAAGAAACTATATTTTTTTGTATGAGTTTACCATTGAGACACTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAAGAAACTATATTTTTTTGTATGAGTTTACCATTGAGACACTTT  750

seq1  GGATATATAAAGGAAAAATTGGATTTTTTAAACATAGACTATAAAAGCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATATAAAGGAAAAATTGGATTTTTTAAACATAGACTATAAAAGCAC  800

seq1  TGATCACAAAGTCTGTGGAAATAAGTATTATAATGTCTATATTGTGATAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCACAAAGTCTGTGGAAATAAGTATTATAATGTCTATATTGTGATAT  850

seq1  TAAGATAGTATGAAAATT-GGGGATGAAAAAAAAGAGTATTCGCATGGAT  899
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TAAGATAGTATGAAAATTGGGGGATGAAAAAAAAGAGTATTCGCATGGAT  900

seq1  TTACGA  905
      ||||||
seq2  TTACGA  906


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