BAC Information

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BAC

Clone NameB6Ng01-267F20
Chromosome3 (Build37)
Map Location 98,600,092 - 98,600,507
singlet/doubletsinglet
Overlap genenone
Upstream genePde4dip, Sec22b, EG433632, LOC100042975, Notch2, Adam30, LOC622561, Reg4, Hmgcs2, Phgdh, Zfp697, LOC100043461, Hsd3b4, LOC100043456, EG545555, LOC676433, Hsd3b5, LOC668543, Hsd3b2, Hsd3b3
Downstream geneHsd3b6, LOC545556, Hsd3b1, Hao3, LOC668557, Wars2, Tbx15, M6pr-ps
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267F20.bB6Ng01-267F20.g
ACCGA070506GA070507
length1,231410
definitionB6Ng01-267F20.b B6Ng01-267F20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccataaattcattctttttaatagctgagtagtactccattgtgt
aaatgtaccacattttctgtatccattcctctgttgaggggcatctgggt
tctttccagcttctggctattataaataaggctgctatgaacatagtgga
gcatgtgtccttaccggttgggacatcttctggatatatgcccaggagag
gtattgtgggatcctccagtagtactatgtccaattttctgaggaaccgc
cagactgatttccagagtggttgtacaagcttgcaatcccaccaacaatg
gaggagtgttcctctttctccacattctcgccagcatctgctgtcacctg
aatttttcatcttagccattctgactggtgtgaggtggaatctcagggtt
gttttgatttgcatatccctgatgattaaggatgttgaacatttttttca
ggtgcttttctgccattaggtattcctcaggtgagaattctttgttcagt
tcagagccccattttttaatggggttatttgattttctggagtccacctt
cttgagttctttatatatattggatattggtcccctatccgatttgggat
gggtaaagatcctttcccaatctgttggtggtcttttgttttattgacgg
tgtcttttgccttgcagaagctttgcaattttatgaggtcccatttatcg
attcttgatcttacagcacaagccactgctgttctattcaggaatttttc
ccctgtacccatatcttcgaggcttttccctactttctcctctataagtt
tcagtgtctctggttttatgtggagttccttaatccaattagatttgact
ttagtacaagggagatagtaatggatcaattcgcaatcttctacatgata
acagccagttgtgccagcaccattttgttgaaaatgctctttttccactg
gatggttttagctcccttgtcaagatcaagtgaccagaggtgtgtgggtt
catctctgggtcttcaattctgttccatggtctacctgtcttgtctttat
accagtaccatgcagttttaatcaccaattgctctgtagttatagcttag
gttcggcatgggtgattcccaactgaggtcctttaatcccttgagaaaag
aagttttgctatccctcggatctttggtatatccagaatgaatctctgtc
gcaaattgcccccttcttctacaaattcgtg
agattattaggctttgaagcaggatctttttctgctgagccacctcatca
tttcttcaactcaagctctaaatgcacaggagatatttttctctgtgtga
tggtctctattccaacaccgccccatttttcctcctgctttacaataaaa
catgttaggaaaggtttttgtttcagctcaccaagtgataggtcaacatt
aaacaagaaattctcatcaaaggacgttctttctcaggcagatgctggac
aatctctgaatgtagaaataaacttgtctacaaagtgagttctagtacag
tcaaagctacacagagaaaccctgtctcaaaataaaggaagaaagggagg
aaggaatggaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaa
ggaaggaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_98600092_98600507
seq2: B6Ng01-267F20.g_69_484 (reverse)

seq1  CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCC  50

seq1  TCCATTCCTTCCTCCCTTTCTTCCTTTATTTTGAGACAGGGTTTCTCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTCCTTCCTCCCTTTCTTCCTTTATTTTGAGACAGGGTTTCTCTGT  100

seq1  GTAGCTTTGACTGTACTAGAACTCACTTTGTAGACAAGTTTATTTCTACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTTTGACTGTACTAGAACTCACTTTGTAGACAAGTTTATTTCTACA  150

seq1  TTCAGAGATTGTCCAGCATCTGCCTGAGAAAGAACGTCCTTTGATGAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAGATTGTCCAGCATCTGCCTGAGAAAGAACGTCCTTTGATGAGAA  200

seq1  TTTCTTGTTTAATGTTGACCTATCACTTGGTGAGCTGAAACAAAAACCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGTTTAATGTTGACCTATCACTTGGTGAGCTGAAACAAAAACCTT  250

seq1  TCCTAACATGTTTTATTGTAAAGCAGGAGGAAAAATGGGGCGGTGTTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAACATGTTTTATTGTAAAGCAGGAGGAAAAATGGGGCGGTGTTGGA  300

seq1  ATAGAGACCATCACACAGAGAAAAATATCTCCTGTGCATTTAGAGCTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGACCATCACACAGAGAAAAATATCTCCTGTGCATTTAGAGCTTGA  350

seq1  GTTGAAGAAATGATGAGGTGGCTCAGCAGAAAAAGATCCTGCTTCAAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAAGAAATGATGAGGTGGCTCAGCAGAAAAAGATCCTGCTTCAAAGC  400

seq1  CTAATAATCTGAATTC  416
      ||||||||||||||||
seq2  CTAATAATCTGAATTC  416